ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet64d02 |
|---|---|
| Clone Library Name | barley_pub |
>MIOX_ORYSA (Q5Z8T3) Probable inositol oxygenase (EC 1.13.99.1) (Myo-inositol| oxygenase) Length = 308 Score = 40.0 bits (92), Expect = 0.002 Identities = 16/19 (84%), Positives = 17/19 (89%) Frame = -2 Query: 293 VKPYYMSLIEKYFPEKQKW 237 VKPYYMSLIEKYFP K +W Sbjct: 290 VKPYYMSLIEKYFPAKLRW 308
>MIOX5_ARATH (Q9FJU4) Inositol oxygenase 5 (EC 1.13.99.1) (Myo-inositol| oxygenase 5) (AtMIOX5) Length = 314 Score = 38.9 bits (89), Expect = 0.003 Identities = 15/19 (78%), Positives = 17/19 (89%) Frame = -2 Query: 293 VKPYYMSLIEKYFPEKQKW 237 VKPYYMSLI+KYFPE +W Sbjct: 296 VKPYYMSLIKKYFPENLRW 314
>MIOX4_ARATH (Q8H1S0) Inositol oxygenase 4 (EC 1.13.99.1) (Myo-inositol| oxygenase 4) (AtMIOX4) Length = 317 Score = 38.9 bits (89), Expect = 0.003 Identities = 15/19 (78%), Positives = 17/19 (89%) Frame = -2 Query: 293 VKPYYMSLIEKYFPEKQKW 237 VKPYYMSLI+KYFPE +W Sbjct: 299 VKPYYMSLIKKYFPENLRW 317
>MIOX2_ARATH (O82200) Inositol oxygenase 2 (EC 1.13.99.1) (Myo-inositol| oxygenase 2) (AtMIOX2) Length = 317 Score = 37.7 bits (86), Expect = 0.008 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = -2 Query: 293 VKPYYMSLIEKYFPEKQKW 237 VKPYY+SLI KYFP K KW Sbjct: 299 VKPYYISLINKYFPAKLKW 317
>MIOX1_ARATH (Q8L799) Inositol oxygenase 1 (EC 1.13.99.1) (Myo-inositol| oxygenase 1) (AtMIOX1) Length = 311 Score = 36.6 bits (83), Expect = 0.017 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -2 Query: 293 VKPYYMSLIEKYFPEKQKW 237 VKPYY+SL KYFP K KW Sbjct: 293 VKPYYLSLTNKYFPSKLKW 311
>MIOX_BRARE (Q4V8T0) Inositol oxygenase (EC 1.13.99.1) (Myo-inositol oxygenase)| Length = 278 Score = 29.3 bits (64), Expect = 2.7 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 Query: 293 VKPYYMSLIEKYFPEKQKW 237 +KPYY SLI+KY P +W Sbjct: 260 LKPYYQSLIDKYCPGVLQW 278
>CAC1A_MOUSE (P97445) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2164 Score = 28.5 bits (62), Expect = 4.6 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +3 Query: 114 VTIHDSLE---QSLFLLFSMASGSWNNNTIICCLGSVPC 221 +T H++ Q+L LLF A+G +N ++ CL PC Sbjct: 1636 ITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKPC 1674
>CAC1A_RAT (P54282) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 4) (Brain calcium channel I) (BI) (RAT brain class A) (RBA-I) Length = 2212 Score = 28.5 bits (62), Expect = 4.6 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +3 Query: 114 VTIHDSLE---QSLFLLFSMASGSWNNNTIICCLGSVPC 221 +T H++ Q+L LLF A+G +N ++ CL PC Sbjct: 1684 ITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKPC 1722
>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2424 Score = 28.5 bits (62), Expect = 4.6 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +3 Query: 114 VTIHDSLE---QSLFLLFSMASGSWNNNTIICCLGSVPC 221 +T H++ Q+L LLF A+G +N ++ CL PC Sbjct: 1742 ITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKPC 1780
>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2505 Score = 28.5 bits (62), Expect = 4.6 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +3 Query: 114 VTIHDSLE---QSLFLLFSMASGSWNNNTIICCLGSVPC 221 +T H++ Q+L LLF A+G +N ++ CL PC Sbjct: 1733 ITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKPC 1771
>POL_SOCMV (P15629) Enzymatic polyprotein [Contains: Aspartic protease (EC| 3.4.23.-); Endonuclease; Reverse transcriptase (EC 2.7.7.49)] Length = 692 Score = 27.7 bits (60), Expect = 7.8 Identities = 14/51 (27%), Positives = 23/51 (45%) Frame = +2 Query: 71 TGVDTTSNAHSTRMSDNTRQLGTISFPSVFHGEWKLE**YYHMLFGFRSLP 223 + +D S + R+ +NT+ L S P H EW + + FG + P Sbjct: 294 SSLDAKSGYYQLRLHENTKPLTAFSCPPQKHYEWNV------LSFGLKQAP 338 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,185,294 Number of Sequences: 219361 Number of extensions: 587764 Number of successful extensions: 1270 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1239 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1270 length of database: 80,573,946 effective HSP length: 73 effective length of database: 64,560,593 effective search space used: 1549454232 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
