Clone Information

BLAST Search Result

Clone Name	rbaet64d01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	emb\|AJ251304.1\|HVU251304 Hordeum vulgare mRNA for allene oxide s...	700	0.0
2	gb\|BT009396.1\| Triticum aestivum clone wlm96.pk039.g16:fis, full...	250	3e-63
3	gb\|AY196004.1\| Triticum aestivum allene oxide synthase (TaAOS) m...	224	1e-55
4	emb\|AJ250864.1\|HVU250864 Hordeum vulgare mRNA for allene oxide s...	194	1e-46
5	ref\|NM_187610.1\| Oryza sativa (japonica cultivar-group), predic...	115	1e-22
6	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	115	1e-22
7	gb\|AY062258.1\| Oryza sativa (japonica cultivar-group) dev-stage ...	115	1e-22
8	gb\|AC107226.2\| Oryza sativa (japonica cultivar-group) chromosome...	115	1e-22
9	gb\|AY310358.1\| Oryza sativa (japonica cultivar-group) allene oxi...	115	1e-22
10	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	115	1e-22
11	gb\|AY055775.1\| Oryza sativa allene oxide synthase (AOS) mRNA, co...	115	1e-22
12	dbj\|AK066138.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	115	1e-22
13	dbj\|AK061758.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	115	1e-22
14	gb\|DQ428532.1\| Sorghum propinquum locus PRC1203 genomic sequence	109	6e-21
15	gb\|DQ428531.1\| Sorghum bicolor voucher PI585454 locus PRC1203 ge...	109	6e-21
16	gb\|DQ428530.1\| Sorghum bicolor voucher PI267539 locus PRC1203 ge...	109	6e-21
17	gb\|DQ428529.1\| Sorghum bicolor voucher PI267408 locus PRC1203 ge...	109	6e-21
18	gb\|DQ428528.1\| Sorghum bicolor voucher PI221607 locus PRC1203 ge...	109	6e-21
19	gb\|DQ428527.1\| Sorghum bicolor voucher PI152702 locus PRC1203 ge...	109	6e-21
20	gb\|DQ428525.1\| Sorghum bicolor voucher NSL87902 locus PRC1203 ge...	109	6e-21
21	gb\|DQ428524.1\| Sorghum bicolor voucher NSL87666 locus PRC1203 ge...	109	6e-21
22	gb\|DQ428523.1\| Sorghum bicolor voucher NSL77217 locus PRC1203 ge...	109	6e-21
23	gb\|DQ428522.1\| Sorghum bicolor voucher NSL77034 locus PRC1203 ge...	109	6e-21
24	gb\|DQ428519.1\| Sorghum bicolor voucher NSL55243 locus PRC1203 ge...	109	6e-21
25	gb\|DQ428518.1\| Sorghum bicolor voucher NSL51365 locus PRC1203 ge...	109	6e-21
26	gb\|DQ428516.1\| Sorghum bicolor voucher NSL51030a locus PRC1203 g...	109	6e-21
27	gb\|DQ428515.1\| Sorghum bicolor voucher NSL50875 locus PRC1203 ge...	109	6e-21
28	gb\|DQ428514.1\| Sorghum bicolor voucher BTx623 locus PRC1203 geno...	109	6e-21
29	gb\|DQ428526.1\| Sorghum bicolor voucher NSL92371 locus PRC1203 ge...	101	1e-18
30	gb\|DQ428521.1\| Sorghum bicolor voucher NSL56174 locus PRC1203 ge...	101	1e-18
31	gb\|DQ428520.1\| Sorghum bicolor voucher NSL56003 locus PRC1203 ge...	101	1e-18
32	gb\|DQ428517.1\| Sorghum bicolor voucher NSL51030b locus PRC1203 g...	101	1e-18
33	gb\|AY488135.1\| Zea mays allene oxide synthase (aos) mRNA, comple...	98	2e-17
34	gb\|AY104188.1\| Zea mays PCO060855 mRNA sequence	98	2e-17
35	emb\|AL939117.1\|SCO939117 Streptomyces coelicolor A3(2) complete ...	42	1.2
36	dbj\|BA000030.2\| Streptomyces avermitilis MA-4680 genomic DNA, co...	42	1.2
37	emb\|BX005481.11\| Zebrafish DNA sequence from clone CH211-79C1 in...	42	1.2
38	dbj\|AB180905.1\| Streptomyces coelicolor gene for H+-pyrophosphat...	42	1.2
39	emb\|AL591519.5\| Human DNA sequence from clone RP11-160E20 on chr...	40	4.7
40	emb\|AL590867.10\| Human DNA sequence from clone RP11-475C16 on ch...	40	4.7
41	gb\|AE012349.1\| Xanthomonas campestris pv. campestris str. ATCC 3...	40	4.7
42	gb\|CP000050.1\| Xanthomonas campestris pv. campestris str. 8004, ...	40	4.7
43	dbj\|AP008218.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	4.7
44	gb\|AC074136.4\| Homo sapiens chromosome 16 clone CTD-2318B16, com...	40	4.7
45	gb\|AC007595.9\| Homo sapiens chromosome 16 clone RP11-109M19, com...	40	4.7
46	gb\|AE004475.1\| Pseudomonas aeruginosa PAO1, section 36 of 529 of...	40	4.7
47	gb\|AF214677.1\|AF214677 Pseudomonas aeruginosa unknown in vivo-in...	40	4.7
48	gb\|DQ340253.1\| Glycine max cytochrome P450 monooxygenase CYP74A ...	40	4.7
49	gb\|CP000086.1\| Burkholderia thailandensis E264 chromosome I, com...	40	4.7
50	gb\|U39263.1\|ATU39263 Agrobacterium tumefaciens plasmid pAtR10 pr...	40	4.7
51	gb\|DP000011.1\| Oryza sativa (japonica cultivar-group) chromosome...	40	4.7
52	emb\|AL954156.3\|CNS08CCU Oryza sativa chromosome 12, . BAC OSJNBa...	40	4.7
53	dbj\|AP006840.1\| Symbiobacterium thermophilum IAM 14863 DNA, comp...	40	4.7

>emb|AJ251304.1|HVU251304 Hordeum vulgare mRNA for allene oxide synthase (aos2 gene)
          Length = 1722

 Score =  700 bits (353), Expect = 0.0
 Identities = 353/353 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    aagtaaatccatactataaaatagacttatttaagaacggaggagtgagtactccgttag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1646 aagtaaatccatactataaaatagacttatttaagaacggaggagtgagtactccgttag 1587

                                                                        
Query: 61   acaccaaacaagatgcatgctatatactctgtactgtatatgacagacgtacgtacgtgt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1586 acaccaaacaagatgcatgctatatactctgtactgtatatgacagacgtacgtacgtgt 1527

                                                                        
Query: 121  tgacgacccgttgatccgcttgtcatacatagccggtgcaggttttaaacagccccagga 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1526 tgacgacccgttgatccgcttgtcatacatagccggtgcaggttttaaacagccccagga 1467

                                                                        
Query: 181  ccggatgtggccttggtgacaccggtgaattcaaccttggggccgagcaggtcgacgccg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1466 ccggatgtggccttggtgacaccggtgaattcaaccttggggccgagcaggtcgacgccg 1407

                                                                        
Query: 241  acgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgacg 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1406 acgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgacg 1347

                                                                 
Query: 301  agcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 agcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 1294

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>gb|BT009396.1| Triticum aestivum clone wlm96.pk039.g16:fis, full insert mRNA
            sequence
          Length = 1870

 Score =  250 bits (126), Expect = 3e-63
 Identities = 165/178 (92%)
 Strand = Plus / Minus

                                                                        
Query: 176  caggaccggatgtggccttggtgacaccggtgaattcaaccttggggccgagcaggtcga 235
            |||||||||| |||||||||||||| |||||||| |||||||||| ||||||||||||||
Sbjct: 1544 caggaccggacgtggccttggtgacgccggtgaactcaaccttggtgccgagcaggtcga 1485

                                                                        
Query: 236  cgccgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgc 295
            | |||||||||||||| ||||||||||||||||||||||  || || |||||||||||||
Sbjct: 1484 ccccgacgtcggcggtgaaggtgtcgtaccggaggaacagctccaccaccaggagcctgc 1425

                                                                      
Query: 296  cgacgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
            | |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1424 ccacgagcacgaccaggttcttgcctgggcactgcttgttgtccacgctggggctctc 1367

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>gb|AY196004.1| Triticum aestivum allene oxide synthase (TaAOS) mRNA, complete cds
          Length = 1779

 Score =  224 bits (113), Expect = 1e-55
 Identities = 162/177 (91%), Gaps = 1/177 (0%)
 Strand = Plus / Minus

                                                                        
Query: 178  ggaccggatgtggccttggtgacaccggtgaattcaaccttggggccgagcaggtcgacg 237
            |||||||| |||||||||||||| |||||||| |||||||||| ||| ||||||||||| 
Sbjct: 1474 ggaccggacgtggccttggtgacgccggtgaactcaaccttggtgcccagcaggtcgacc 1415

                                                                        
Query: 238  ccgacgtcggcggtaaaggtgtcgtacc-ggaggaacaattcgacgaccaggagcctgcc 296
            |||||||||||||| ||||||||||||| |||||||||  || || ||||||||||||||
Sbjct: 1414 ccgacgtcggcggtgaaggtgtcgtaccgggaggaacagctccaccaccaggagcctgcc 1355

                                                                     
Query: 297  gacgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
             |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1354 cacgagcacgaccaggttcttgcctgggcactgcttgttgtccacgctggggctctc 1298

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>emb|AJ250864.1|HVU250864 Hordeum vulgare mRNA for allene oxide synthase (aos gene)
          Length = 1819

 Score =  194 bits (98), Expect = 1e-46
 Identities = 155/174 (89%)
 Strand = Plus / Minus

                                                                        
Query: 180  accggatgtggccttggtgacaccggtgaattcaaccttggggccgagcaggtcgacgcc 239
            |||||| || ||||||||||| |||||||| |||||||||| |||||| ||||||| |||
Sbjct: 1529 accggacgttgccttggtgacgccggtgaactcaaccttggtgccgagaaggtcgaggcc 1470

                                                                        
Query: 240  gacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgac 299
            ||| | ||| || ||||||||||||||||||||||  || || |||||||||| ||||||
Sbjct: 1469 gactttggccgtgaaggtgtcgtaccggaggaacagctccaccaccaggagccggccgac 1410

                                                                  
Query: 300  gagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
            |||||||||||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct: 1409 gagcacgaccaggttcttgcctgggcactgcttgttgtgcacgctggggctctc 1356

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>ref|NM_187610.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1437

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                        
Query: 244  tcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgacgagc 303
            |||||||| |||||||||||||||||||| |  ||||||| ||  ||||| |||||||||
Sbjct: 1367 tcggcggtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagc 1308

                                                              
Query: 304  acgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
            || ||||| |||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 1307 accaccaggttcttgccggggcactgcttgttgtcaacgctagggttctc 1258

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                           
Query: 244     tcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgacgagc 303
               |||||||| |||||||||||||||||||| |  ||||||| ||  ||||| |||||||||
Sbjct: 6578486 tcggcggtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagc 6578427

                                                                 
Query: 304     acgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
               || ||||| |||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 6578426 accaccaggttcttgccggggcactgcttgttgtcaacgctagggttctc 6578377

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>gb|AY062258.1| Oryza sativa (japonica cultivar-group) dev-stage seedling allene
            oxide synthase (AOS) gene, complete cds
          Length = 2465

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                        
Query: 244  tcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgacgagc 303
            |||||||| |||||||||||||||||||| |  ||||||| ||  ||||| |||||||||
Sbjct: 1762 tcggcggtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagc 1703

                                                              
Query: 304  acgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
            || ||||| |||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 1702 accaccaggttcttgccggggcactgcttgttgtcaacgctagggttctc 1653

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>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02,
              complete sequence
          Length = 162425

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                          
Query: 244    tcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgacgagc 303
              |||||||| |||||||||||||||||||| |  ||||||| ||  ||||| |||||||||
Sbjct: 121248 tcggcggtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagc 121189

                                                                
Query: 304    acgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
              || ||||| |||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 121188 accaccaggttcttgccggggcactgcttgttgtcaacgctagggttctc 121139

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>gb|AY310358.1| Oryza sativa (japonica cultivar-group) allene oxide synthase mRNA,
            complete cds
          Length = 1775

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                        
Query: 244  tcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgacgagc 303
            |||||||| |||||||||||||||||||| |  ||||||| ||  ||||| |||||||||
Sbjct: 1484 tcggcggtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagc 1425

                                                              
Query: 304  acgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
            || ||||| |||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 1424 accaccaggttcttgccggggcactgcttgttgtcaacgctagggttctc 1375

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                           
Query: 244     tcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgacgagc 303
               |||||||| |||||||||||||||||||| |  ||||||| ||  ||||| |||||||||
Sbjct: 6577699 tcggcggtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagc 6577640

                                                                 
Query: 304     acgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
               || ||||| |||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 6577639 accaccaggttcttgccggggcactgcttgttgtcaacgctagggttctc 6577590

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>gb|AY055775.1| Oryza sativa allene oxide synthase (AOS) mRNA, complete cds
          Length = 1809

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                        
Query: 244  tcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgacgagc 303
            |||||||| |||||||||||||||||||| |  ||||||| ||  ||||| |||||||||
Sbjct: 1493 tcggcggtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagc 1434

                                                              
Query: 304  acgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
            || ||||| |||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 1433 accaccaggttcttgccggggcactgcttgttgtcaacgctagggttctc 1384

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>dbj|AK066138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052K11, full
            insert sequence
          Length = 1974

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                        
Query: 244  tcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgacgagc 303
            |||||||| |||||||||||||||||||| |  ||||||| ||  ||||| |||||||||
Sbjct: 1630 tcggcggtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagc 1571

                                                              
Query: 304  acgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
            || ||||| |||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 1570 accaccaggttcttgccggggcactgcttgttgtcaacgctagggttctc 1521

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>dbj|AK061758.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A10, full
            insert sequence
          Length = 1843

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                        
Query: 244  tcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccgacgagc 303
            |||||||| |||||||||||||||||||| |  ||||||| ||  ||||| |||||||||
Sbjct: 1507 tcggcggtgaaggtgtcgtaccggaggaagagctcgacgagcaacagccttccgacgagc 1448

                                                              
Query: 304  acgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
            || ||||| |||||||||||||||||||||||||| ||||| ||| ||||
Sbjct: 1447 accaccaggttcttgccggggcactgcttgttgtcaacgctagggttctc 1398

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>gb|DQ428532.1| Sorghum propinquum locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428531.1| Sorghum bicolor voucher PI585454 locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428530.1| Sorghum bicolor voucher PI267539 locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428529.1| Sorghum bicolor voucher PI267408 locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428528.1| Sorghum bicolor voucher PI221607 locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428527.1| Sorghum bicolor voucher PI152702 locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428525.1| Sorghum bicolor voucher NSL87902 locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428524.1| Sorghum bicolor voucher NSL87666 locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428523.1| Sorghum bicolor voucher NSL77217 locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428522.1| Sorghum bicolor voucher NSL77034 locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428519.1| Sorghum bicolor voucher NSL55243 locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428518.1| Sorghum bicolor voucher NSL51365 locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428516.1| Sorghum bicolor voucher NSL51030a locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428515.1| Sorghum bicolor voucher NSL50875 locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428514.1| Sorghum bicolor voucher BTx623 locus PRC1203 genomic sequence
          Length = 518

 Score =  109 bits (55), Expect = 6e-21
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||||||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428526.1| Sorghum bicolor voucher NSL92371 locus PRC1203 genomic sequence
          Length = 518

 Score =  101 bits (51), Expect = 1e-18
 Identities = 99/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||| ||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggacgaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428521.1| Sorghum bicolor voucher NSL56174 locus PRC1203 genomic sequence
          Length = 518

 Score =  101 bits (51), Expect = 1e-18
 Identities = 99/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||| ||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggacgaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428520.1| Sorghum bicolor voucher NSL56003 locus PRC1203 genomic sequence
          Length = 518

 Score =  101 bits (51), Expect = 1e-18
 Identities = 99/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||| ||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggacgaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|DQ428517.1| Sorghum bicolor voucher NSL51030b locus PRC1203 genomic sequence
          Length = 518

 Score =  101 bits (51), Expect = 1e-18
 Identities = 99/115 (86%)
 Strand = Plus / Minus

                                                                       
Query: 239 cgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgccga 298
           |||| |||||||| ||||||||||| |||| ||| |  |||||||  | |||||||||||
Sbjct: 335 cgacctcggcggtgaaggtgtcgtaacggacgaagagctcgacgaggaagagcctgccga 276

                                                                  
Query: 299 cgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
           ||||||| || |  |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 275 cgagcaccacaaagttcttgccggggcactgcttgttgtcgacgctggggttctc 221

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>gb|AY488135.1| Zea mays allene oxide synthase (aos) mRNA, complete cds
          Length = 1768

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 100/117 (85%)
 Strand = Plus / Minus

                                                                        
Query: 237  gccgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgcc 296
            |||||| |||||||| || |||||||| |||||||| |  |||||||  |||||||||||
Sbjct: 1488 gccgacctcggcggtgaatgtgtcgtagcggaggaagagctcgacgaggaggagcctgcc 1429

                                                                     
Query: 297  gacgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
            ||| ||||| || |  ||||| |||||||||||||||||||| ||||||||| ||||
Sbjct: 1428 gaccagcaccacgaagttcttcccggggcactgcttgttgtcgacgctggggttctc 1372

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>gb|AY104188.1| Zea mays PCO060855 mRNA sequence
          Length = 1768

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 100/117 (85%)
 Strand = Plus / Minus

                                                                        
Query: 237  gccgacgtcggcggtaaaggtgtcgtaccggaggaacaattcgacgaccaggagcctgcc 296
            |||||| |||||||| || |||||||| |||||||| |  |||||||  |||||||||||
Sbjct: 1488 gccgacctcggcggtgaatgtgtcgtagcggaggaagagctcgacgaggaggagcctgcc 1429

                                                                     
Query: 297  gacgagcacgaccagattcttgccggggcactgcttgttgtccacgctggggctctc 353
            ||| ||||| || |  ||||| |||||||||||||||||||| ||||||||| ||||
Sbjct: 1428 gaccagcaccacgaagttcttcccggggcactgcttgttgtcgacgctggggttctc 1372

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>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 222  gccgagcaggtcgacgccgacgtcggcgg 250
            ||||| ||||||| |||||||||||||||
Sbjct: 4747 gccgaccaggtcggcgccgacgtcggcgg 4775

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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 222     gccgagcaggtcgacgccgacgtcggcgg 250
               ||||| ||||||| |||||||||||||||
Sbjct: 5633519 gccgaccaggtcggcgccgacgtcggcgg 5633491

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>emb|BX005481.11| Zebrafish DNA sequence from clone CH211-79C1 in linkage group 1,
             complete sequence
          Length = 170604

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    tatatactctgtactgtatat 101
             |||||||||||||||||||||
Sbjct: 97625 tatatactctgtactgtatat 97645

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>dbj|AB180905.1| Streptomyces coelicolor gene for H+-pyrophosphatase, complete cds
          Length = 2694

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 222 gccgagcaggtcgacgccgacgtcggcgg 250
           ||||| ||||||| |||||||||||||||
Sbjct: 915 gccgaccaggtcggcgccgacgtcggcgg 887

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>emb|AL591519.5| Human DNA sequence from clone RP11-160E20 on chromosome 6, complete
             sequence
          Length = 99611

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    ctataaaatagacttattta 33
             ||||||||||||||||||||
Sbjct: 38840 ctataaaatagacttattta 38821

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>emb|AL590867.10| Human DNA sequence from clone RP11-475C16 on chromosome 6 Contains a
             ribosomal protein L27a (60S ribosomal protein L27a)
             (RPL27A) pseudogene and a novel gene, complete sequence
          Length = 63621

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 7     atccatactataaaatagacttatttaa 34
             |||||||| |||||||||||||||||||
Sbjct: 51309 atccatac-ataaaatagacttatttaa 51283

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>gb|AE012349.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 257
            of 460 of the complete genome
          Length = 10575

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  ggtcgacgccgacgtcggcg 249
            ||||||||||||||||||||
Sbjct: 6008 ggtcgacgccgacgtcggcg 6027

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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 230     ggtcgacgccgacgtcggcg 249
               ||||||||||||||||||||
Sbjct: 2073396 ggtcgacgccgacgtcggcg 2073377

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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 28      tatttaagaacggaggagtg 47
               ||||||||||||||||||||
Sbjct: 6580430 tatttaagaacggaggagtg 6580449

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>gb|AC074136.4| Homo sapiens chromosome 16 clone CTD-2318B16, complete sequence
          Length = 105956

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   gttttaaacagccccaggac 181
             ||||||||||||||||||||
Sbjct: 81081 gttttaaacagccccaggac 81062

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>gb|AC007595.9| Homo sapiens chromosome 16 clone RP11-109M19, complete sequence
          Length = 186303

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    gttttaaacagccccaggac 181
              ||||||||||||||||||||
Sbjct: 160570 gttttaaacagccccaggac 160589

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>gb|AE004475.1| Pseudomonas aeruginosa PAO1, section 36 of 529 of the complete genome
          Length = 10859

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 232  tcgacgccgacgtcggcggt 251
            ||||||||||||||||||||
Sbjct: 4356 tcgacgccgacgtcggcggt 4337

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>gb|AF214677.1|AF214677 Pseudomonas aeruginosa unknown in vivo-induced protein 134-21 gene,
           partial cds
          Length = 489

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 232 tcgacgccgacgtcggcggt 251
           ||||||||||||||||||||
Sbjct: 74  tcgacgccgacgtcggcggt 55

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>gb|DQ340253.1| Glycine max cytochrome P450 monooxygenase CYP74A (CYP74A) mRNA,
            complete cds
          Length = 1756

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 301  agcacgaccagattcttgccggggcactgctt 332
            ||||| ||||||||||| ||||| ||||||||
Sbjct: 1387 agcaccaccagattcttcccgggacactgctt 1356

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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 267     gaggaacaattcgacgaccaggagcctg 294
               ||||||||| |||||| |||||||||||
Sbjct: 2157983 gaggaacaactcgacggccaggagcctg 2158010

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>gb|U39263.1|ATU39263 Agrobacterium tumefaciens plasmid pAtR10 proline dehydrogenase (putA)
            and Prp (prp) genes, complete cds
          Length = 4501

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 222  gccgagcaggtcgacgccgacgtc 245
            ||||||||||||| ||||||||||
Sbjct: 3166 gccgagcaggtcgtcgccgacgtc 3189

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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 28      tatttaagaacggaggagtg 47
               ||||||||||||||||||||
Sbjct: 6580305 tatttaagaacggaggagtg 6580324

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>emb|AL954156.3|CNS08CCU Oryza sativa chromosome 12, . BAC OSJNBa0096K13 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 138508

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     tatttaagaacggaggagtg 47
              ||||||||||||||||||||
Sbjct: 133570 tatttaagaacggaggagtg 133589

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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 323     ggcactgcttgttgtccacg 342
               ||||||||||||||||||||
Sbjct: 1639985 ggcactgcttgttgtccacg 1639966


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,151,526
Number of Sequences: 3902068
Number of extensions: 2151526
Number of successful extensions: 43494
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 43074
Number of HSP's gapped (non-prelim): 420
length of query: 353
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 331
effective length of database: 17,147,199,772
effective search space: 5675723124532
effective search space used: 5675723124532
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result