>gb|AC129019.4| Mus musculus BAC clone RP24-541L1 from chromosome 13, complete sequence
          Length = 190792

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 294   tattagcaatggtcccaagctg 315
             ||||||||||||||||||||||
Sbjct: 94049 tattagcaatggtcccaagctg 94028

>gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome 12, complete sequence
          Length = 207840

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 184   cagcagtacaagagcagcaca 204
             |||||||||||||||||||||
Sbjct: 13963 cagcagtacaagagcagcaca 13983

>gb|AC159282.2| Mus musculus BAC clone RP23-329M17 from chromosome 12, complete sequence
          Length = 210571

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 184    cagcagtacaagagcagcaca 204
              |||||||||||||||||||||
Sbjct: 171047 cagcagtacaagagcagcaca 171067

>gb|AC164611.3| Mus musculus BAC clone RP23-421C2 from chromosome 8, complete sequence
          Length = 188068

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 28     caaaaacaaaatccaaatcaggaac 52
              ||||||||||||| |||||||||||
Sbjct: 150310 caaaaacaaaatcaaaatcaggaac 150286

>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0063D09 map S1559, complete sequence
          Length = 190721

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    caaaaacaaaatccaaatca 47
             ||||||||||||||||||||
Sbjct: 80009 caaaaacaaaatccaaatca 80028

>gb|CP000121.1| Anabaena variabilis ATCC 29413 plasmid C, complete sequence
          Length = 300758

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    gttcttcatccaagctacaa 174
              ||||||||||||||||||||
Sbjct: 177512 gttcttcatccaagctacaa 177531

>gb|AC102102.7| Mus musculus chromosome 16, clone RP23-79F12, complete sequence
          Length = 194828

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    caaaaacaaaatccaaatca 47
             ||||||||||||||||||||
Sbjct: 69531 caaaaacaaaatccaaatca 69512

>emb|AL513543.14| Human DNA sequence from clone RP11-343J24 on chromosome 1 Contains
            part of the CHRM3 gene for cholinergic receptor
            muscarinic 3 and a novel gene (DKFZp667K2218), complete
            sequence
          Length = 90907

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 30   aaaacaaaatccaaatcaggaaca 53
            |||| |||||||||||||||||||
Sbjct: 2944 aaaagaaaatccaaatcaggaaca 2967

>emb|AJ937320.1| Trypanosoma brucei brucei mRNA for variant surface glycoprotein Mul
           3 (VSG Mul 3 gene)
          Length = 1501

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  gctggcaaaaacaaaatcca 42
           ||||||||||||||||||||
Sbjct: 95  gctggcaaaaacaaaatcca 114

>emb|CR392009.5| Mouse DNA sequence from clone RP24-250C1 on chromosome X, complete
             sequence
          Length = 106098

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    caaaaacaaaatccaaatca 47
             ||||||||||||||||||||
Sbjct: 78942 caaaaacaaaatccaaatca 78961

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 28      caaaaacaaaatccaaatca 47
               ||||||||||||||||||||
Sbjct: 3712337 caaaaacaaaatccaaatca 3712356

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 187     cagtacaagagcagcacatgccatcagc 214
               ||||||| ||||||||||||||| ||||
Sbjct: 2167254 cagtacatgagcagcacatgccaccagc 2167281

>gb|AC005007.1|AC005007 Homo sapiens BAC clone GS1-51M12 from 7p21-p22, complete sequence
          Length = 136862

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    caaaaacaaaatccaaatca 47
             ||||||||||||||||||||
Sbjct: 91013 caaaaacaaaatccaaatca 91032

>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_D01
          Length = 97862

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 187   cagtacaagagcagcacatgccatcagc 214
             ||||||| ||||||||||||||| ||||
Sbjct: 45516 cagtacatgagcagcacatgccaccagc 45543

>dbj|AK070704.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056N10, full
            insert sequence
          Length = 2476

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 187  cagtacaagagcagcacatgccatcagc 214
            ||||||| ||||||||||||||| ||||
Sbjct: 2430 cagtacatgagcagcacatgccaccagc 2403

>emb|BX530058.4| Zebrafish DNA sequence from clone DKEYP-89D7 in linkage group 19,
              complete sequence
          Length = 199529

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     ggcaaaaacaaaatccaaat 45
              ||||||||||||||||||||
Sbjct: 100051 ggcaaaaacaaaatccaaat 100070

>dbj|AP001876.5| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2544I7, complete
             sequence
          Length = 197086

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 286   caagacattattagcaatgg 305
             ||||||||||||||||||||
Sbjct: 16332 caagacattattagcaatgg 16313

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 28      caaaaacaaaatccaaatca 47
               ||||||||||||||||||||
Sbjct: 3721031 caaaaacaaaatccaaatca 3721050

>gb|CP000224.1| Drosophila melanogaster genomic scaffold 211000022280794
          Length = 474727

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ataagctggcaaaaacaaaa 38
             ||||||||||||||||||||
Sbjct: 16557 ataagctggcaaaaacaaaa 16576

>gb|AC154292.1| Mus musculus BAC clone RP24-488N1 from 16, complete sequence
          Length = 192613

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    caaaaacaaaatccaaatca 47
             ||||||||||||||||||||
Sbjct: 15930 caaaaacaaaatccaaatca 15949


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,761,260
Number of Sequences: 3902068
Number of extensions: 3761260
Number of successful extensions: 66889
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66767
Number of HSP's gapped (non-prelim): 122
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)