ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet63f01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 176 bits (89), Expect = 4e-41 Identities = 152/173 (87%) Strand = Plus / Plus Query: 292 ttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacc 351 ||||||| ||| ||||||| ||| | |||||| |||| |||||||||||||||| | || Sbjct: 27662685 ttagcaatagacatggctttccaccaaagatcaattagcttgccttctaggcctctctcc 27662744 Query: 352 aaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatg 411 || ||||||||||||||||||||| |||||||| ||||||| ||||||||| | ||||| Sbjct: 27662745 aaagttgaagaggagctgcacagcatagaggcatgcatctcctcaccctccctgaccatc 27662804 Query: 412 gagacaatctctgatggtttgaggaggcttggagacatctacagtaccattga 464 ||||| |||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 27662805 gagacgatctctgatggtttgaggaggcttggggacatctacagctccattga 27662857 Score = 161 bits (81), Expect = 3e-36 Identities = 150/173 (86%) Strand = Plus / Plus Query: 292 ttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacc 351 ||||||||||| ||||||| ||| | |||||| |||| |||||||| |||||| | || Sbjct: 27650345 ttagcaacagacatggctttccaccaaagatcaattagcttgccttccaggcctatctcc 27650404 Query: 352 aaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatg 411 || ||||||||||||||||||||| | |||||| | ||||||||||||||| | ||||| Sbjct: 27650405 aaagttgaagaggagctgcacagcattgaggcatggatctcttcaccctccctgaccatc 27650464 Query: 412 gagacaatctctgatggtttgaggaggcttggagacatctacagtaccattga 464 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 27650465 gagacaatctctgatggtttcaggaggcttggggacatctacagctccattga 27650517 Score = 161 bits (81), Expect = 3e-36 Identities = 150/173 (86%) Strand = Plus / Plus Query: 292 ttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacc 351 ||||| ||||| ||||||| ||| | |||||| |||| |||||||||||||||| | || Sbjct: 27646244 ttagccacagacatggctttccaccaaagatcaattagcttgccttctaggcctctctcc 27646303 Query: 352 aaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatg 411 || |||||||||||||| |||||| |||||||| ||||||||||||||||| | ||||| Sbjct: 27646304 aaagttgaagaggagcttcacagcatagaggcatgcatctcttcaccctccctgaccatt 27646363 Query: 412 gagacaatctctgatggtttgaggaggcttggagacatctacagtaccattga 464 |||| ||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 27646364 gagatgatctctgatggtttgaggaggcttgaggacatctacagctccattga 27646416 Score = 159 bits (80), Expect = 1e-35 Identities = 146/168 (86%) Strand = Plus / Plus Query: 297 aacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacaccaaggt 356 |||||| ||||||| ||| | |||||| ||||||||||||||||||||| | |||| || Sbjct: 27648690 aacagacatggctttccaccaaagatcaattagtttgccttctaggcctctctccaaagt 27648749 Query: 357 tgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatggagac 416 |||||||||||| |||||| |||||||| ||||||||||||||| | | ||||| |||| Sbjct: 27648750 tgaagaggagcttcacagcatagaggcatgcatctcttcacccttcctgaccattgagat 27648809 Query: 417 aatctctgatggtttgaggaggcttggagacatctacagtaccattga 464 ||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 27648810 gatctctgatggtttgaggaggcttgaggacatctacagctccattga 27648857 Score = 141 bits (71), Expect = 2e-30 Identities = 140/163 (85%) Strand = Plus / Plus Query: 291 cttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacac 350 |||||||||| | ||||||| ||| | ||||||||||| |||| ||| ||||||| | | Sbjct: 27651970 cttagcaacacacatggctttccaccaaagatcagttagcttgcgttccaggcctctctc 27652029 Query: 351 caaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccat 410 ||| ||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||| Sbjct: 27652030 caaagttgaagaggagctgcacagcgtagaggcatgcatctcttcaccctccctgaccat 27652089 Query: 411 ggagacaatctctgatggtttgaggaggcttggagacatctac 453 ||| ||||||| |||||| ||||| |||| || ||||||||| Sbjct: 27652090 cgaggcaatctccgatggtctgagggggctcggggacatctac 27652132 Score = 133 bits (67), Expect = 6e-28 Identities = 139/163 (85%) Strand = Plus / Plus Query: 293 tagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacca 352 |||||||||| ||||||| ||| | |||||| |||| |||||||||||||||| | ||| Sbjct: 27677542 tagcaacagacatggctttccaccaaagatcaattagcttgccttctaggcctctctcca 27677601 Query: 353 aggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatgg 412 | |||||||| ||| |||||||| |||||||| ||||||| |||||||||| ||||| | Sbjct: 27677602 aagttgaagatgagttgcacagcatagaggcatgcatctcatcaccctccacgaccatcg 27677661 Query: 413 agacaatctctgatggtttgaggaggcttggagacatctacag 455 || ||||||||||||||||| ||||||| ||||||||||| Sbjct: 27677662 aggtggtctctgatggtttgaggcggcttggggacatctacag 27677704 Score = 133 bits (67), Expect = 6e-28 Identities = 139/163 (85%) Strand = Plus / Plus Query: 292 ttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacc 351 |||||||||| ||||||| ||| | |||||| |||| |||||||||||||||| | || Sbjct: 27659355 ttagcaacaggcatggctttccaccaaagatcaattagcttgccttctaggcctctctcc 27659414 Query: 352 aaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatg 411 || |||||||||||||||||||||||||| ||| || |||| ||||| ||||| ||||| Sbjct: 27659415 aaagttgaagaggagctgcacagcctagaagcatgcgtctcatcaccgtccatgaccatc 27659474 Query: 412 gagacaatctctgatggtttgaggaggcttggagacatctaca 454 |||| || ||||||| |||||||||||||| |||||||||| Sbjct: 27659475 gagatgatttctgatgttttgaggaggcttgatgacatctaca 27659517 Score = 125 bits (63), Expect = 1e-25 Identities = 129/151 (85%) Strand = Plus / Plus Query: 293 tagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacca 352 |||||||||| ||||||| ||| | |||||| |||| |||||||| ||||||| | ||| Sbjct: 27675813 tagcaacagacatggctttccaccaaagatcaattagcttgccttcaaggcctctctcca 27675872 Query: 353 aggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatgg 412 |||||||||| ||| |||||||| |||||||| | |||| |||||||||| ||||| | Sbjct: 27675873 aggttgaagatgagttgcacagcatagaggcatgtgtctcatcaccctccaagaccatcg 27675932 Query: 413 agacaatctctgatggtttgaggaggcttgg 443 ||| |||||||||||||||||||||||||| Sbjct: 27675933 agatgatctctgatggtttgaggaggcttgg 27675963 Score = 119 bits (60), Expect = 9e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 319 agatcagttagtttgccttctaggcctcacaccaaggttgaagaggagctgcacagccta 378 |||||| ||||||||||||||||||||||| | |||||||||||||||||| || |||| Sbjct: 27679191 agatcaattagtttgccttctaggcctcactctaaggttgaagaggagctgtgcatccta 27679250 Query: 379 gaggcaagcatctcttcaccctccatcaccatggagacaatctctgatggtttgaggagg 438 || ||| |||||||||||||||||| ||| | || ||||| | ||| |||||||||||| Sbjct: 27679251 gatgcatgcatctcttcaccctccacgacccttgatacaatgtgtgagggtttgaggagg 27679310 Query: 439 cttg 442 |||| Sbjct: 27679311 cttg 27679314 Score = 113 bits (57), Expect = 5e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 292 ttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacc 351 ||||||| ||| ||||||| ||| | |||||| |||||| |||||||| |||| | || Sbjct: 27661082 ttagcaatagacatggctttccaccaaagatcaactagtttaccttctagacctctctcc 27661141 Query: 352 aaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatg 411 | ||||||||||||||||||||| | |||||| | ||||||||||||||| | ||||| Sbjct: 27661142 agagttgaagaggagctgcacagcattgaggcatggatctcttcaccctccctgaccatc 27661201 Query: 412 gagacaatctctgatggtttgaggaggcttggagacatctacagtaccattga 464 |||| |||||| ||||||||||||| |||| ||||||||||| || ||||| Sbjct: 27661202 gagatgatctctcatggtttgaggagccttgtggacatctacagcactattga 27661254 Score = 111 bits (56), Expect = 2e-21 Identities = 131/156 (83%) Strand = Plus / Plus Query: 293 tagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacca 352 |||||||||| ||||||| ||| | |||||| |||| |||||||| ||||||| | ||| Sbjct: 27674053 tagcaacagacatggctttccaccaaagatcaattagcttgccttcaaggcctctctcca 27674112 Query: 353 aggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatgg 412 |||||||||| ||| |||||||| |||||||| | |||| |||||||||| |||| Sbjct: 27674113 aggttgaagatgagttgcacagcatagaggcatacgtctcatcaccctccaagaccacca 27674172 Query: 413 agacaatctctgatggtttgaggaggcttggagaca 448 ||| |||||||||||||||||||||||||| |||| Sbjct: 27674173 agatgatctctgatggtttgaggaggcttggtgaca 27674208 Score = 103 bits (52), Expect = 5e-19 Identities = 133/160 (83%) Strand = Plus / Plus Query: 296 caacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacaccaagg 355 ||||||||||||||||||| | |||||| |||| |||||||||||| ||||| |||| | Sbjct: 27688336 caacagatatggcttgccaccaaagatcaattagcttgccttctaggactcactccaaag 27688395 Query: 356 ttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatggaga 415 ||||||| ||||| |||| | |||||||| |||||||||| |||| || ||||| |||| Sbjct: 27688396 ttgaagaagagcttcacatcgtagaggcatccatctcttcaacctcgatgaccattgaga 27688455 Query: 416 caatctctgatggtttgaggaggcttggagacatctacag 455 |||| |||||||| | |||||||| || |||||||| Sbjct: 27688456 tcctctccgatggtttaaagaggcttgaggatatctacag 27688495 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 364 gagctgcacagcctagaggcaagcatctcttcaccctcca 403 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 27639765 gagctgcaaagcctagaggcaagcatctcttcaccctcca 27639804 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 180 cagttcctcggtataaataggccccagaagaaggctaaacacatcaaacc 229 ||||||||| ||||||||||||| | ||||||| |||||||||||||| Sbjct: 27688232 cagttcctctgtataaataggccttggcagaaggccaaacacatcaaacc 27688281 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 424 gatggtttgaggaggcttggagacatctaca 454 ||||||||||||| ||||||||| ||||||| Sbjct: 27638095 gatggtttgaggaagcttggagatatctaca 27638125 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 tggaacatgacaatgtgatatctcat 28 |||||||||||||||||||| ||||| Sbjct: 27645717 tggaacatgacaatgtgatagctcat 27645742 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 tggaacatgacaatgtgatatctcattgg 31 |||||||||||||||||||| ||||||| Sbjct: 27688050 tggaacatgacaatgtgatagttcattgg 27688078 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 acatgacaatgtgatatctc 26 |||||||||||||||||||| Sbjct: 27650060 acatgacaatgtgatatctc 27650079 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 tgatggtttgaggaggcttggaga 446 ||||||| |||||||||||||||| Sbjct: 27639812 tgatggtctgaggaggcttggaga 27639835 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 304 atggcttgccatcttagatcagttagtttgcc 335 ||||||||||| || |||||||| |||||||| Sbjct: 27639696 atggcttgccacctaagatcagtcagtttgcc 27639727
>dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0011H15 Length = 130146 Score = 176 bits (89), Expect = 4e-41 Identities = 152/173 (87%) Strand = Plus / Plus Query: 292 ttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacc 351 ||||||| ||| ||||||| ||| | |||||| |||| |||||||||||||||| | || Sbjct: 60029 ttagcaatagacatggctttccaccaaagatcaattagcttgccttctaggcctctctcc 60088 Query: 352 aaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatg 411 || ||||||||||||||||||||| |||||||| ||||||| ||||||||| | ||||| Sbjct: 60089 aaagttgaagaggagctgcacagcatagaggcatgcatctcctcaccctccctgaccatc 60148 Query: 412 gagacaatctctgatggtttgaggaggcttggagacatctacagtaccattga 464 ||||| |||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 60149 gagacgatctctgatggtttgaggaggcttggggacatctacagctccattga 60201 Score = 161 bits (81), Expect = 3e-36 Identities = 150/173 (86%) Strand = Plus / Plus Query: 292 ttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacc 351 ||||||||||| ||||||| ||| | |||||| |||| |||||||| |||||| | || Sbjct: 47689 ttagcaacagacatggctttccaccaaagatcaattagcttgccttccaggcctatctcc 47748 Query: 352 aaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatg 411 || ||||||||||||||||||||| | |||||| | ||||||||||||||| | ||||| Sbjct: 47749 aaagttgaagaggagctgcacagcattgaggcatggatctcttcaccctccctgaccatc 47808 Query: 412 gagacaatctctgatggtttgaggaggcttggagacatctacagtaccattga 464 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 47809 gagacaatctctgatggtttcaggaggcttggggacatctacagctccattga 47861 Score = 161 bits (81), Expect = 3e-36 Identities = 150/173 (86%) Strand = Plus / Plus Query: 292 ttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacc 351 ||||| ||||| ||||||| ||| | |||||| |||| |||||||||||||||| | || Sbjct: 43588 ttagccacagacatggctttccaccaaagatcaattagcttgccttctaggcctctctcc 43647 Query: 352 aaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatg 411 || |||||||||||||| |||||| |||||||| ||||||||||||||||| | ||||| Sbjct: 43648 aaagttgaagaggagcttcacagcatagaggcatgcatctcttcaccctccctgaccatt 43707 Query: 412 gagacaatctctgatggtttgaggaggcttggagacatctacagtaccattga 464 |||| ||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 43708 gagatgatctctgatggtttgaggaggcttgaggacatctacagctccattga 43760 Score = 159 bits (80), Expect = 1e-35 Identities = 146/168 (86%) Strand = Plus / Plus Query: 297 aacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacaccaaggt 356 |||||| ||||||| ||| | |||||| ||||||||||||||||||||| | |||| || Sbjct: 46034 aacagacatggctttccaccaaagatcaattagtttgccttctaggcctctctccaaagt 46093 Query: 357 tgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatggagac 416 |||||||||||| |||||| |||||||| ||||||||||||||| | | ||||| |||| Sbjct: 46094 tgaagaggagcttcacagcatagaggcatgcatctcttcacccttcctgaccattgagat 46153 Query: 417 aatctctgatggtttgaggaggcttggagacatctacagtaccattga 464 ||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 46154 gatctctgatggtttgaggaggcttgaggacatctacagctccattga 46201 Score = 141 bits (71), Expect = 2e-30 Identities = 140/163 (85%) Strand = Plus / Plus Query: 291 cttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacac 350 |||||||||| | ||||||| ||| | ||||||||||| |||| ||| ||||||| | | Sbjct: 49314 cttagcaacacacatggctttccaccaaagatcagttagcttgcgttccaggcctctctc 49373 Query: 351 caaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccat 410 ||| ||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||| Sbjct: 49374 caaagttgaagaggagctgcacagcgtagaggcatgcatctcttcaccctccctgaccat 49433 Query: 411 ggagacaatctctgatggtttgaggaggcttggagacatctac 453 ||| ||||||| |||||| ||||| |||| || ||||||||| Sbjct: 49434 cgaggcaatctccgatggtctgagggggctcggggacatctac 49476 Score = 133 bits (67), Expect = 6e-28 Identities = 139/163 (85%) Strand = Plus / Plus Query: 293 tagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacca 352 |||||||||| ||||||| ||| | |||||| |||| |||||||||||||||| | ||| Sbjct: 74886 tagcaacagacatggctttccaccaaagatcaattagcttgccttctaggcctctctcca 74945 Query: 353 aggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatgg 412 | |||||||| ||| |||||||| |||||||| ||||||| |||||||||| ||||| | Sbjct: 74946 aagttgaagatgagttgcacagcatagaggcatgcatctcatcaccctccacgaccatcg 75005 Query: 413 agacaatctctgatggtttgaggaggcttggagacatctacag 455 || ||||||||||||||||| ||||||| ||||||||||| Sbjct: 75006 aggtggtctctgatggtttgaggcggcttggggacatctacag 75048 Score = 133 bits (67), Expect = 6e-28 Identities = 139/163 (85%) Strand = Plus / Plus Query: 292 ttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacc 351 |||||||||| ||||||| ||| | |||||| |||| |||||||||||||||| | || Sbjct: 56699 ttagcaacaggcatggctttccaccaaagatcaattagcttgccttctaggcctctctcc 56758 Query: 352 aaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatg 411 || |||||||||||||||||||||||||| ||| || |||| ||||| ||||| ||||| Sbjct: 56759 aaagttgaagaggagctgcacagcctagaagcatgcgtctcatcaccgtccatgaccatc 56818 Query: 412 gagacaatctctgatggtttgaggaggcttggagacatctaca 454 |||| || ||||||| |||||||||||||| |||||||||| Sbjct: 56819 gagatgatttctgatgttttgaggaggcttgatgacatctaca 56861 Score = 125 bits (63), Expect = 1e-25 Identities = 129/151 (85%) Strand = Plus / Plus Query: 293 tagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacca 352 |||||||||| ||||||| ||| | |||||| |||| |||||||| ||||||| | ||| Sbjct: 73157 tagcaacagacatggctttccaccaaagatcaattagcttgccttcaaggcctctctcca 73216 Query: 353 aggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatgg 412 |||||||||| ||| |||||||| |||||||| | |||| |||||||||| ||||| | Sbjct: 73217 aggttgaagatgagttgcacagcatagaggcatgtgtctcatcaccctccaagaccatcg 73276 Query: 413 agacaatctctgatggtttgaggaggcttgg 443 ||| |||||||||||||||||||||||||| Sbjct: 73277 agatgatctctgatggtttgaggaggcttgg 73307 Score = 119 bits (60), Expect = 9e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 319 agatcagttagtttgccttctaggcctcacaccaaggttgaagaggagctgcacagccta 378 |||||| ||||||||||||||||||||||| | |||||||||||||||||| || |||| Sbjct: 76535 agatcaattagtttgccttctaggcctcactctaaggttgaagaggagctgtgcatccta 76594 Query: 379 gaggcaagcatctcttcaccctccatcaccatggagacaatctctgatggtttgaggagg 438 || ||| |||||||||||||||||| ||| | || ||||| | ||| |||||||||||| Sbjct: 76595 gatgcatgcatctcttcaccctccacgacccttgatacaatgtgtgagggtttgaggagg 76654 Query: 439 cttg 442 |||| Sbjct: 76655 cttg 76658 Score = 113 bits (57), Expect = 5e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 292 ttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacc 351 ||||||| ||| ||||||| ||| | |||||| |||||| |||||||| |||| | || Sbjct: 58426 ttagcaatagacatggctttccaccaaagatcaactagtttaccttctagacctctctcc 58485 Query: 352 aaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatg 411 | ||||||||||||||||||||| | |||||| | ||||||||||||||| | ||||| Sbjct: 58486 agagttgaagaggagctgcacagcattgaggcatggatctcttcaccctccctgaccatc 58545 Query: 412 gagacaatctctgatggtttgaggaggcttggagacatctacagtaccattga 464 |||| |||||| ||||||||||||| |||| ||||||||||| || ||||| Sbjct: 58546 gagatgatctctcatggtttgaggagccttgtggacatctacagcactattga 58598 Score = 111 bits (56), Expect = 2e-21 Identities = 131/156 (83%) Strand = Plus / Plus Query: 293 tagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacca 352 |||||||||| ||||||| ||| | |||||| |||| |||||||| ||||||| | ||| Sbjct: 71397 tagcaacagacatggctttccaccaaagatcaattagcttgccttcaaggcctctctcca 71456 Query: 353 aggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatgg 412 |||||||||| ||| |||||||| |||||||| | |||| |||||||||| |||| Sbjct: 71457 aggttgaagatgagttgcacagcatagaggcatacgtctcatcaccctccaagaccacca 71516 Query: 413 agacaatctctgatggtttgaggaggcttggagaca 448 ||| |||||||||||||||||||||||||| |||| Sbjct: 71517 agatgatctctgatggtttgaggaggcttggtgaca 71552 Score = 103 bits (52), Expect = 5e-19 Identities = 133/160 (83%) Strand = Plus / Plus Query: 296 caacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacaccaagg 355 ||||||||||||||||||| | |||||| |||| |||||||||||| ||||| |||| | Sbjct: 85680 caacagatatggcttgccaccaaagatcaattagcttgccttctaggactcactccaaag 85739 Query: 356 ttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatggaga 415 ||||||| ||||| |||| | |||||||| |||||||||| |||| || ||||| |||| Sbjct: 85740 ttgaagaagagcttcacatcgtagaggcatccatctcttcaacctcgatgaccattgaga 85799 Query: 416 caatctctgatggtttgaggaggcttggagacatctacag 455 |||| |||||||| | |||||||| || |||||||| Sbjct: 85800 tcctctccgatggtttaaagaggcttgaggatatctacag 85839 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 364 gagctgcacagcctagaggcaagcatctcttcaccctcca 403 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 37109 gagctgcaaagcctagaggcaagcatctcttcaccctcca 37148 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 180 cagttcctcggtataaataggccccagaagaaggctaaacacatcaaacc 229 ||||||||| ||||||||||||| | ||||||| |||||||||||||| Sbjct: 85576 cagttcctctgtataaataggccttggcagaaggccaaacacatcaaacc 85625 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 424 gatggtttgaggaggcttggagacatctaca 454 ||||||||||||| ||||||||| ||||||| Sbjct: 35439 gatggtttgaggaagcttggagatatctaca 35469 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 tggaacatgacaatgtgatatctcat 28 |||||||||||||||||||| ||||| Sbjct: 43061 tggaacatgacaatgtgatagctcat 43086 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 tggaacatgacaatgtgatatctcattgg 31 |||||||||||||||||||| ||||||| Sbjct: 85394 tggaacatgacaatgtgatagttcattgg 85422 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 acatgacaatgtgatatctc 26 |||||||||||||||||||| Sbjct: 47404 acatgacaatgtgatatctc 47423 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 tgatggtttgaggaggcttggaga 446 ||||||| |||||||||||||||| Sbjct: 37156 tgatggtctgaggaggcttggaga 37179 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 304 atggcttgccatcttagatcagttagtttgcc 335 ||||||||||| || |||||||| |||||||| Sbjct: 37040 atggcttgccacctaagatcagtcagtttgcc 37071
>ref|XM_483695.1| Oryza sativa (japonica cultivar-group), mRNA Length = 705 Score = 170 bits (86), Expect = 3e-39 Identities = 131/146 (89%) Strand = Plus / Plus Query: 319 agatcagttagtttgccttctaggcctcacaccaaggttgaagaggagctgcacagccta 378 |||||| |||| |||||||||||||||| | |||| ||||||||||||||||||||| || Sbjct: 16 agatcaattagcttgccttctaggcctctctccaaagttgaagaggagctgcacagcata 75 Query: 379 gaggcaagcatctcttcaccctccatcaccatggagacaatctctgatggtttgaggagg 438 |||||| ||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||| Sbjct: 76 gaggcatgcatctcctcaccctccctgaccatcgagacgatctctgatggtttgaggagg 135 Query: 439 cttggagacatctacagtaccattga 464 ||||| ||||||||||| ||||||| Sbjct: 136 cttggggacatctacagctccattga 161
>dbj|AK120301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052H03, full insert sequence Length = 2582 Score = 161 bits (81), Expect = 3e-36 Identities = 150/173 (86%) Strand = Plus / Minus Query: 292 ttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacc 351 ||||||||||| ||||||| ||| | |||||| |||| |||||||| |||||| | || Sbjct: 2040 ttagcaacagacatggctttccaccaaagatcaattagcttgccttccaggcctatctcc 1981 Query: 352 aaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatg 411 || ||||||||||||||||||||| | |||||| | ||||||||||||||| | ||||| Sbjct: 1980 aaagttgaagaggagctgcacagcattgaggcatggatctcttcaccctccctgaccatc 1921 Query: 412 gagacaatctctgatggtttgaggaggcttggagacatctacagtaccattga 464 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1920 gagacaatctctgatggtttcaggaggcttggggacatctacagctccattga 1868 Score = 141 bits (71), Expect = 2e-30 Identities = 140/163 (85%) Strand = Plus / Minus Query: 291 cttagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacac 350 |||||||||| | ||||||| ||| | ||||||||||| |||| ||| ||||||| | | Sbjct: 999 cttagcaacacacatggctttccaccaaagatcagttagcttgcgttccaggcctctctc 940 Query: 351 caaggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccat 410 ||| ||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||| Sbjct: 939 caaagttgaagaggagctgcacagcgtagaggcatgcatctcttcaccctccctgaccat 880 Query: 411 ggagacaatctctgatggtttgaggaggcttggagacatctac 453 ||| ||||||| |||||| ||||| |||| || ||||||||| Sbjct: 879 cgaggcaatctccgatggtctgagggggctcggggacatctac 837 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acatgacaatgtgatatctc 26 |||||||||||||||||||| Sbjct: 2325 acatgacaatgtgatatctc 2306
>ref|XM_483691.1| Oryza sativa (japonica cultivar-group), mRNA Length = 708 Score = 155 bits (78), Expect = 2e-34 Identities = 129/146 (88%) Strand = Plus / Plus Query: 319 agatcagttagtttgccttctaggcctcacaccaaggttgaagaggagctgcacagccta 378 |||||| ||||||||||||||||||||| | |||| |||||||||||||| |||||| || Sbjct: 16 agatcaattagtttgccttctaggcctctctccaaagttgaagaggagcttcacagcata 75 Query: 379 gaggcaagcatctcttcaccctccatcaccatggagacaatctctgatggtttgaggagg 438 |||||| ||||||||||||||| | | ||||| |||| ||||||||||||||||||||| Sbjct: 76 gaggcatgcatctcttcacccttcctgaccattgagatgatctctgatggtttgaggagg 135 Query: 439 cttggagacatctacagtaccattga 464 |||| ||||||||||| ||||||| Sbjct: 136 cttgaggacatctacagctccattga 161
>ref|XM_483690.1| Oryza sativa (japonica cultivar-group), mRNA Length = 705 Score = 155 bits (78), Expect = 2e-34 Identities = 129/146 (88%) Strand = Plus / Plus Query: 319 agatcagttagtttgccttctaggcctcacaccaaggttgaagaggagctgcacagccta 378 |||||| |||| |||||||||||||||| | |||| |||||||||||||| |||||| || Sbjct: 16 agatcaattagcttgccttctaggcctctctccaaagttgaagaggagcttcacagcata 75 Query: 379 gaggcaagcatctcttcaccctccatcaccatggagacaatctctgatggtttgaggagg 438 |||||| ||||||||||||||||| | ||||| |||| ||||||||||||||||||||| Sbjct: 76 gaggcatgcatctcttcaccctccctgaccattgagatgatctctgatggtttgaggagg 135 Query: 439 cttggagacatctacagtaccattga 464 |||| ||||||||||| ||||||| Sbjct: 136 cttgaggacatctacagctccattga 161
>dbj|AP004044.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1125_C01 Length = 123849 Score = 133 bits (67), Expect = 6e-28 Identities = 139/163 (85%) Strand = Plus / Plus Query: 293 tagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacca 352 |||||||||| ||||||| ||| | |||||| |||| |||||||||||||||| | ||| Sbjct: 10464 tagcaacagacatggctttccaccaaagatcaattagcttgccttctaggcctctctcca 10523 Query: 353 aggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatgg 412 | |||||||| ||| |||||||| |||||||| ||||||| |||||||||| ||||| | Sbjct: 10524 aagttgaagatgagttgcacagcatagaggcatgcatctcatcaccctccacgaccatcg 10583 Query: 413 agacaatctctgatggtttgaggaggcttggagacatctacag 455 || ||||||||||||||||| ||||||| ||||||||||| Sbjct: 10584 aggtggtctctgatggtttgaggcggcttggggacatctacag 10626 Score = 125 bits (63), Expect = 1e-25 Identities = 129/151 (85%) Strand = Plus / Plus Query: 293 tagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacca 352 |||||||||| ||||||| ||| | |||||| |||| |||||||| ||||||| | ||| Sbjct: 8735 tagcaacagacatggctttccaccaaagatcaattagcttgccttcaaggcctctctcca 8794 Query: 353 aggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatgg 412 |||||||||| ||| |||||||| |||||||| | |||| |||||||||| ||||| | Sbjct: 8795 aggttgaagatgagttgcacagcatagaggcatgtgtctcatcaccctccaagaccatcg 8854 Query: 413 agacaatctctgatggtttgaggaggcttgg 443 ||| |||||||||||||||||||||||||| Sbjct: 8855 agatgatctctgatggtttgaggaggcttgg 8885 Score = 119 bits (60), Expect = 9e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 319 agatcagttagtttgccttctaggcctcacaccaaggttgaagaggagctgcacagccta 378 |||||| ||||||||||||||||||||||| | |||||||||||||||||| || |||| Sbjct: 12113 agatcaattagtttgccttctaggcctcactctaaggttgaagaggagctgtgcatccta 12172 Query: 379 gaggcaagcatctcttcaccctccatcaccatggagacaatctctgatggtttgaggagg 438 || ||| |||||||||||||||||| ||| | || ||||| | ||| |||||||||||| Sbjct: 12173 gatgcatgcatctcttcaccctccacgacccttgatacaatgtgtgagggtttgaggagg 12232 Query: 439 cttg 442 |||| Sbjct: 12233 cttg 12236 Score = 111 bits (56), Expect = 2e-21 Identities = 131/156 (83%) Strand = Plus / Plus Query: 293 tagcaacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacacca 352 |||||||||| ||||||| ||| | |||||| |||| |||||||| ||||||| | ||| Sbjct: 6975 tagcaacagacatggctttccaccaaagatcaattagcttgccttcaaggcctctctcca 7034 Query: 353 aggttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatgg 412 |||||||||| ||| |||||||| |||||||| | |||| |||||||||| |||| Sbjct: 7035 aggttgaagatgagttgcacagcatagaggcatacgtctcatcaccctccaagaccacca 7094 Query: 413 agacaatctctgatggtttgaggaggcttggagaca 448 ||| |||||||||||||||||||||||||| |||| Sbjct: 7095 agatgatctctgatggtttgaggaggcttggtgaca 7130 Score = 103 bits (52), Expect = 5e-19 Identities = 133/160 (83%) Strand = Plus / Plus Query: 296 caacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacaccaagg 355 ||||||||||||||||||| | |||||| |||| |||||||||||| ||||| |||| | Sbjct: 21258 caacagatatggcttgccaccaaagatcaattagcttgccttctaggactcactccaaag 21317 Query: 356 ttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatggaga 415 ||||||| ||||| |||| | |||||||| |||||||||| |||| || ||||| |||| Sbjct: 21318 ttgaagaagagcttcacatcgtagaggcatccatctcttcaacctcgatgaccattgaga 21377 Query: 416 caatctctgatggtttgaggaggcttggagacatctacag 455 |||| |||||||| | |||||||| || |||||||| Sbjct: 21378 tcctctccgatggtttaaagaggcttgaggatatctacag 21417 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 180 cagttcctcggtataaataggccccagaagaaggctaaacacatcaaacc 229 ||||||||| ||||||||||||| | ||||||| |||||||||||||| Sbjct: 21154 cagttcctctgtataaataggccttggcagaaggccaaacacatcaaacc 21203 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 tggaacatgacaatgtgatatctcattgg 31 |||||||||||||||||||| ||||||| Sbjct: 20972 tggaacatgacaatgtgatagttcattgg 21000
>ref|XM_483702.1| Oryza sativa (japonica cultivar-group), mRNA Length = 705 Score = 121 bits (61), Expect = 2e-24 Identities = 118/137 (86%) Strand = Plus / Plus Query: 319 agatcagttagtttgccttctaggcctcacaccaaggttgaagaggagctgcacagccta 378 |||||| |||| |||||||||||||||| | |||| |||||||| ||| |||||||| || Sbjct: 16 agatcaattagcttgccttctaggcctctctccaaagttgaagatgagttgcacagcata 75 Query: 379 gaggcaagcatctcttcaccctccatcaccatggagacaatctctgatggtttgaggagg 438 |||||| ||||||| |||||||||| ||||| ||| ||||||||||||||||| || Sbjct: 76 gaggcatgcatctcatcaccctccacgaccatcgaggtggtctctgatggtttgaggcgg 135 Query: 439 cttggagacatctacag 455 ||||| ||||||||||| Sbjct: 136 cttggggacatctacag 152
>ref|XM_483703.1| Oryza sativa (japonica cultivar-group), mRNA Length = 705 Score = 119 bits (60), Expect = 9e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 319 agatcagttagtttgccttctaggcctcacaccaaggttgaagaggagctgcacagccta 378 |||||| ||||||||||||||||||||||| | |||||||||||||||||| || |||| Sbjct: 16 agatcaattagtttgccttctaggcctcactctaaggttgaagaggagctgtgcatccta 75 Query: 379 gaggcaagcatctcttcaccctccatcaccatggagacaatctctgatggtttgaggagg 438 || ||| |||||||||||||||||| ||| | || ||||| | ||| |||||||||||| Sbjct: 76 gatgcatgcatctcttcaccctccacgacccttgatacaatgtgtgagggtttgaggagg 135 Query: 439 cttg 442 |||| Sbjct: 136 cttg 139
>ref|XM_483701.1| Oryza sativa (japonica cultivar-group), mRNA Length = 708 Score = 113 bits (57), Expect = 5e-22 Identities = 108/125 (86%) Strand = Plus / Plus Query: 319 agatcagttagtttgccttctaggcctcacaccaaggttgaagaggagctgcacagccta 378 |||||| |||| |||||||| ||||||| | ||||||||||||| ||| |||||||| || Sbjct: 16 agatcaattagcttgccttcaaggcctctctccaaggttgaagatgagttgcacagcata 75 Query: 379 gaggcaagcatctcttcaccctccatcaccatggagacaatctctgatggtttgaggagg 438 |||||| | |||| |||||||||| ||||| |||| ||||||||||||||||||||| Sbjct: 76 gaggcatgtgtctcatcaccctccaagaccatcgagatgatctctgatggtttgaggagg 135 Query: 439 cttgg 443 ||||| Sbjct: 136 cttgg 140
>ref|XM_483694.1| Oryza sativa (japonica cultivar-group), mRNA Length = 708 Score = 107 bits (54), Expect = 3e-20 Identities = 117/138 (84%) Strand = Plus / Plus Query: 327 tagtttgccttctaggcctcacaccaaggttgaagaggagctgcacagcctagaggcaag 386 |||||| |||||||| |||| | ||| ||||||||||||||||||||| | |||||| | Sbjct: 24 tagtttaccttctagacctctctccagagttgaagaggagctgcacagcattgaggcatg 83 Query: 387 catctcttcaccctccatcaccatggagacaatctctgatggtttgaggaggcttggaga 446 ||||||||||||||| | ||||| |||| |||||| ||||||||||||| |||| || Sbjct: 84 gatctcttcaccctccctgaccatcgagatgatctctcatggtttgaggagccttgtgga 143 Query: 447 catctacagtaccattga 464 ||||||||| || ||||| Sbjct: 144 catctacagcactattga 161
>dbj|AK066697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073F17, full insert sequence Length = 3496 Score = 103 bits (52), Expect = 5e-19 Identities = 133/160 (83%) Strand = Plus / Minus Query: 296 caacagatatggcttgccatcttagatcagttagtttgccttctaggcctcacaccaagg 355 ||||||||||||||||||| | |||||| |||| |||||||||||| ||||| |||| | Sbjct: 3101 caacagatatggcttgccaccaaagatcaattagcttgccttctaggactcactccaaag 3042 Query: 356 ttgaagaggagctgcacagcctagaggcaagcatctcttcaccctccatcaccatggaga 415 ||||||| ||||| |||| | |||||||| |||||||||| |||| || ||||| |||| Sbjct: 3041 ttgaagaagagcttcacatcgtagaggcatccatctcttcaacctcgatgaccattgaga 2982 Query: 416 caatctctgatggtttgaggaggcttggagacatctacag 455 |||| |||||||| | |||||||| || |||||||| Sbjct: 2981 tcctctccgatggtttaaagaggcttgaggatatctacag 2942 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 180 cagttcctcggtataaataggccccagaagaaggctaaacacatcaaacc 229 ||||||||| ||||||||||||| | ||||||| |||||||||||||| Sbjct: 3205 cagttcctctgtataaataggccttggcagaaggccaaacacatcaaacc 3156 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 3 tggaacatgacaatgtgatatctcattgg 31 |||||||||||||||||||| ||||||| Sbjct: 3387 tggaacatgacaatgtgatagttcattgg 3359
>ref|XM_483700.1| Oryza sativa (japonica cultivar-group), mRNA Length = 708 Score = 99.6 bits (50), Expect = 8e-18 Identities = 110/130 (84%) Strand = Plus / Plus Query: 319 agatcagttagtttgccttctaggcctcacaccaaggttgaagaggagctgcacagccta 378 |||||| |||| |||||||| ||||||| | ||||||||||||| ||| |||||||| || Sbjct: 16 agatcaattagcttgccttcaaggcctctctccaaggttgaagatgagttgcacagcata 75 Query: 379 gaggcaagcatctcttcaccctccatcaccatggagacaatctctgatggtttgaggagg 438 |||||| | |||| |||||||||| |||| ||| ||||||||||||||||||||| Sbjct: 76 gaggcatacgtctcatcaccctccaagaccaccaagatgatctctgatggtttgaggagg 135 Query: 439 cttggagaca 448 ||||| |||| Sbjct: 136 cttggtgaca 145
>ref|XM_483688.1| Oryza sativa (japonica cultivar-group), mRNA Length = 705 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 364 gagctgcacagcctagaggcaagcatctcttcaccctcca 403 |||||||| ||||||||||||||||||||||||||||||| Sbjct: 70 gagctgcaaagcctagaggcaagcatctcttcaccctcca 109 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 tgatggtttgaggaggcttggaga 446 ||||||| |||||||||||||||| Sbjct: 117 tgatggtctgaggaggcttggaga 140 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 304 atggcttgccatcttagatcagttagtttgcc 335 ||||||||||| || |||||||| |||||||| Sbjct: 1 atggcttgccacctaagatcagtcagtttgcc 32
>ref|XM_483687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 714 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 424 gatggtttgaggaggcttggagacatctaca 454 ||||||||||||| ||||||||| ||||||| Sbjct: 130 gatggtttgaggaagcttggagatatctaca 160
>ref|XM_483693.1| Oryza sativa (japonica cultivar-group), mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 421 tctgatggtttgaggaggcttggagacatctaca 454 ||||||| |||||||||||||| |||||||||| Sbjct: 19 tctgatgttttgaggaggcttgatgacatctaca 52
>gb|AC142290.1| Pan troglodytes BAC clone RP43-180M6 from 7, complete sequence Length = 234045 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 417 aatctctgatggtttgaggagg 438 |||||||||||||||||||||| Sbjct: 32958 aatctctgatggtttgaggagg 32937
>gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204618 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 ctctctcattctcatatcttg 258 ||||||||||||||||||||| Sbjct: 112921 ctctctcattctcatatcttg 112901
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 agagtcttagcaacagatat 305 |||||||||||||||||||| Sbjct: 57085 agagtcttagcaacagatat 57066
>gb|AC154528.2| Mus musculus BAC clone RP23-460I18 from chromosome 14, complete sequence Length = 207430 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ctcaacacagaggaaagagt 290 |||||||||||||||||||| Sbjct: 59518 ctcaacacagaggaaagagt 59537
>gb|AC124977.8| Mus musculus chromosome 7, clone RP24-89J20, complete sequence Length = 239915 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 atgacaatgtgatatctcat 28 |||||||||||||||||||| Sbjct: 170773 atgacaatgtgatatctcat 170792
>gb|AC124719.3| Mus musculus BAC clone RP23-382J10 from chromosome 12, complete sequence Length = 191038 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 tcattggaagaatagctgct 44 |||||||||||||||||||| Sbjct: 77015 tcattggaagaatagctgct 77034
>gb|AY374122.1| Oryza sativa (japonica cultivar-group) SCC3 mRNA, complete cds Length = 3362 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 agagtcttagcaacagatat 305 |||||||||||||||||||| Sbjct: 363 agagtcttagcaacagatat 344
>emb|AL357136.22| Human DNA sequence from clone RP11-814L17 on chromosome 10, complete sequence Length = 44067 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 aaagataccaaatgttgcac 93 |||||||||||||||||||| Sbjct: 83 aaagataccaaatgttgcac 102
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 agagtcttagcaacagatat 305 |||||||||||||||||||| Sbjct: 55925 agagtcttagcaacagatat 55906
>gb|AC073176.8| Homo sapiens chromosome 10 clone RP11-432J9, complete sequence Length = 175610 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 aaagataccaaatgttgcac 93 |||||||||||||||||||| Sbjct: 173693 aaagataccaaatgttgcac 173712
>emb|AL732390.10| Mouse DNA sequence from clone RP23-413O19 on chromosome 11 Contains a laminin receptor 1 (ribosomal protein SA) (Lamr1) pseudogene, a novel gene, the 3' end of the Fgf18 gene for fibroblast growth factor 18 and a CpG island, complete sequence Length = 195612 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cctcaagtactcaacacaga 281 |||||||||||||||||||| Sbjct: 144251 cctcaagtactcaacacaga 144270
>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184334 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 agaagaaggctaaacacatcaaac 228 ||||| |||||||||||||||||| Sbjct: 100198 agaaggaggctaaacacatcaaac 100221
>ref|NM_132328.1| Drosophila melanogaster CG17446-RA (CG17446), mRNA Length = 1992 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 agaagaaggctaaacacatcaaac 228 ||||| |||||||||||||||||| Sbjct: 278 agaaggaggctaaacacatcaaac 301
>gb|M60043.1|HSBIE1AA Bovine herpesvirus 4 putative (IE1) and IE1 genes, complete cds Length = 3241 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tccatcaccatggagacaat 419 |||||||||||||||||||| Sbjct: 493 tccatcaccatggagacaat 512
>gb|AF318573.1|AF318573 Bovine herpesvirus 4 long unique region, complete sequence Length = 108873 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 tccatcaccatggagacaat 419 |||||||||||||||||||| Sbjct: 21203 tccatcaccatggagacaat 21184
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 agagtcttagcaacagatat 305 |||||||||||||||||||| Sbjct: 5370411 agagtcttagcaacagatat 5370392
>gb|AC068706.6| Homo sapiens BAC clone RP11-703O4 from 2, complete sequence Length = 124146 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aaactgtggagatgagttgg 137 |||||||||||||||||||| Sbjct: 74035 aaactgtggagatgagttgg 74016
>gb|AF546188.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family from Zea mays, complete sequence Length = 203363 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 cttcaccctccatcaccatggaga 415 |||||||||||| ||||||||||| Sbjct: 135162 cttcaccctccaccaccatggaga 135139
>gb|AC108443.18| Mus musculus chromosome 7, clone RP23-13J9, complete sequence Length = 198138 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 atgacaatgtgatatctcat 28 |||||||||||||||||||| Sbjct: 89770 atgacaatgtgatatctcat 89789
>dbj|AK100219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046E22, full insert sequence Length = 1653 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 agagtcttagcaacagatat 305 |||||||||||||||||||| Sbjct: 758 agagtcttagcaacagatat 739
>dbj|AK069089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008B14, full insert sequence Length = 3756 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 agagtcttagcaacagatat 305 |||||||||||||||||||| Sbjct: 704 agagtcttagcaacagatat 685
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gtgctgtatcatacagttcc 186 |||||||||||||||||||| Sbjct: 491630 gtgctgtatcatacagttcc 491611
>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete sequence Length = 290970 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 agaagaaggctaaacacatcaaac 228 ||||| |||||||||||||||||| Sbjct: 223523 agaaggaggctaaacacatcaaac 223500
>gb|AC174647.2| Mus musculus BAC clone RP23-25C24 from chromosome 14, complete sequence Length = 238300 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 ctcaacacagaggaaagagt 290 |||||||||||||||||||| Sbjct: 23085 ctcaacacagaggaaagagt 23066
>emb|AL691439.8| Mouse DNA sequence from clone RP23-263H8 on chromosome 2, complete sequence Length = 30770 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 aggaggcttggagacatcta 452 |||||||||||||||||||| Sbjct: 6752 aggaggcttggagacatcta 6771 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,094,971 Number of Sequences: 3902068 Number of extensions: 4094971 Number of successful extensions: 78737 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78524 Number of HSP's gapped (non-prelim): 205 length of query: 469 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 447 effective length of database: 17,147,199,772 effective search space: 7664798298084 effective search space used: 7664798298084 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
