| Clone Name | rbaet63e02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL161612.13| Human DNA sequence from clone RP11-196P2 on chromosome 13 Contains a novel gene, complete sequence Length = 160145 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 agcatcttataaattacaactta 154 ||||||||||||||||||||||| Sbjct: 32671 agcatcttataaattacaactta 32649
>gb|AC058784.17|AC058784 Homo sapiens chromosome 13 clone RP11-288O16, complete sequence Length = 163781 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Plus Query: 132 agcatcttataaattacaactta 154 ||||||||||||||||||||||| Sbjct: 24011 agcatcttataaattacaactta 24033
>gb|AC108101.2| Homo sapiens chromosome 5 clone RP11-125H10, complete sequence Length = 144841 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 atgcttctagaactgatgtgca 27 |||||||||||||||||||||| Sbjct: 26564 atgcttctagaactgatgtgca 26585
>gb|AC092280.2| Homo sapiens chromosome 5 clone CTD-2028M21, complete sequence Length = 101502 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 atgcttctagaactgatgtgca 27 |||||||||||||||||||||| Sbjct: 22226 atgcttctagaactgatgtgca 22247
>gb|AC106803.3| Homo sapiens chromosome 5 clone RP11-478A7, complete sequence Length = 169122 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 atgcttctagaactgatgtgca 27 |||||||||||||||||||||| Sbjct: 160329 atgcttctagaactgatgtgca 160350
>ref|XM_451320.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A07216g predicted mRNA Length = 561 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 gtaaggctccaagaatccaat 337 ||||||||||||||||||||| Sbjct: 143 gtaaggctccaagaatccaat 123
>ref|XM_451321.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A07227g predicted mRNA Length = 561 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 gtaaggctccaagaatccaat 337 ||||||||||||||||||||| Sbjct: 479 gtaaggctccaagaatccaat 499
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 gtaaggctccaagaatccaat 337 ||||||||||||||||||||| Sbjct: 648513 gtaaggctccaagaatccaat 648493
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 acaccttcaggcctttcaaa 173 |||||||||||||||||||| Sbjct: 1338386 acaccttcaggcctttcaaa 1338367
>gb|AC167018.4| Mus musculus BAC clone RP23-354F11 from chromosome 16, complete sequence Length = 199488 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 acaacatagcttcagccttc 223 |||||||||||||||||||| Sbjct: 56368 acaacatagcttcagccttc 56387
>gb|AC124445.4| Mus musculus BAC clone RP24-191B18 from chromosome 10, complete sequence Length = 190295 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 caatgaacctgtaacaggtg 353 |||||||||||||||||||| Sbjct: 1729 caatgaacctgtaacaggtg 1710
>gb|AC090821.13| Homo sapiens chromosome 8, clone CTD-2309H9, complete sequence Length = 166843 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 tcaaatgacatttccttgga 188 |||||||||||||||||||| Sbjct: 50593 tcaaatgacatttccttgga 50612
>emb|Z73896.1|CEF09E8 Caenorhabditis elegans Cosmid F09E8, complete sequence Length = 40124 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ttttggaaaaagaattggaa 124 |||||||||||||||||||| Sbjct: 25280 ttttggaaaaagaattggaa 25299
>gb|DQ366729.1| Uncultured Prochlorococcus marinus clone HF10-88H9 genomic sequence Length = 34302 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 acaccttcaggcctttcaaa 173 |||||||||||||||||||| Sbjct: 24262 acaccttcaggcctttcaaa 24281
>emb|AL354653.26| Human DNA sequence from clone RP11-326A14 on chromosome Xq13.3-21.2 Contains the 3' end of the RPS6KA6 gene for ribosomal protein S6 kinase, complete sequence Length = 173760 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 tttcaaatgacatttccttg 186 |||||||||||||||||||| Sbjct: 6492 tttcaaatgacatttccttg 6473
>dbj|AK135233.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720441I06 product:unclassifiable, full insert sequence Length = 2303 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 acaacatagcttcagccttc 223 |||||||||||||||||||| Sbjct: 690 acaacatagcttcagccttc 671
>gb|AC008948.8| Homo sapiens chromosome 5 clone CTD-2333K2, complete sequence Length = 176656 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 agaattggaagtactggagcatct 138 |||||||||||||| ||||||||| Sbjct: 65154 agaattggaagtacaggagcatct 65131
>gb|AC122360.4| Mus musculus BAC clone RP23-428P21 from chromosome 10, complete sequence Length = 210757 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 caatgaacctgtaacaggtg 353 |||||||||||||||||||| Sbjct: 170751 caatgaacctgtaacaggtg 170732
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 acatttgaactagtgtacat 265 |||||||||||||||||||| Sbjct: 205507 acatttgaactagtgtacat 205488
>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0066B16 Length = 190143 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 acatttgaactagtgtacat 265 |||||||||||||||||||| Sbjct: 101005 acatttgaactagtgtacat 100986
>emb|AL805930.16| Mouse DNA sequence from clone RP23-455B8 on chromosome 4, complete sequence Length = 174746 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 cctttcaaatgacatttcct 184 |||||||||||||||||||| Sbjct: 14335 cctttcaaatgacatttcct 14354 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,686,821 Number of Sequences: 3902068 Number of extensions: 3686821 Number of successful extensions: 93449 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93381 Number of HSP's gapped (non-prelim): 68 length of query: 426 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 404 effective length of database: 17,147,199,772 effective search space: 6927468707888 effective search space used: 6927468707888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)