ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet63d03 |
|---|---|
| Clone Library Name | barley_pub |
>CBIO2_LISMO (Q8Y454) Cobalt import ATP-binding protein cbiO 2| Length = 279 Score = 31.2 bits (69), Expect = 0.71 Identities = 16/60 (26%), Positives = 27/60 (45%) Frame = +1 Query: 4 QQYQRLEKIMTGYNTVQRYRYKI*RTETQTVEYISISIHQGSNHAVAVHQLHPSLFPGHG 183 + + RLE + Y ++Y K Q E++++ H GS + L+ LFP G Sbjct: 3 ESFVRLEHVFYKYEDTEKYAVKDVSISAQKGEWVALVGHNGSGKSTIAKLLNGLLFPEDG 62
>CBIO2_LISMF (Q71WH7) Cobalt import ATP-binding protein cbiO 2| Length = 279 Score = 31.2 bits (69), Expect = 0.71 Identities = 16/60 (26%), Positives = 27/60 (45%) Frame = +1 Query: 4 QQYQRLEKIMTGYNTVQRYRYKI*RTETQTVEYISISIHQGSNHAVAVHQLHPSLFPGHG 183 + + RLE + Y ++Y K Q E++++ H GS + L+ LFP G Sbjct: 3 ESFVRLEHVFYKYEDTEKYAVKDVSISAQKGEWVALVGHNGSGKSTIAKLLNGLLFPEDG 62
>CBIO2_LISIN (Q927N8) Cobalt import ATP-binding protein cbiO 2| Length = 279 Score = 31.2 bits (69), Expect = 0.71 Identities = 16/60 (26%), Positives = 27/60 (45%) Frame = +1 Query: 4 QQYQRLEKIMTGYNTVQRYRYKI*RTETQTVEYISISIHQGSNHAVAVHQLHPSLFPGHG 183 + + RLE + Y ++Y K Q E++++ H GS + L+ LFP G Sbjct: 3 ESFVRLEHVFYKYEDTEKYAVKDVSISAQKGEWVALVGHNGSGKSTIAKLLNGLLFPEDG 62
>PERN_IPOBA (O04796) Neutral peroxidase precursor (EC 1.11.1.7) (SwPN1)| Length = 348 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Frame = -3 Query: 172 ETRKGAADARL-LHDCFLDEC 113 ETR GA+ RL HDCF+D C Sbjct: 87 ETRMGASLIRLHFHDCFVDGC 107
>YQJA_BACSU (P54538) Hypothetical protein yqjA| Length = 322 Score = 27.7 bits (60), Expect = 7.8 Identities = 16/65 (24%), Positives = 32/65 (49%) Frame = +1 Query: 16 RLEKIMTGYNTVQRYRYKI*RTETQTVEYISISIHQGSNHAVAVHQLHPSLFPGHGSKSG 195 R E + Y ++ +++I V ISI++ QG A +H L ++ PG+ + Sbjct: 207 RYENLHYHYFKMREKQFEIIERLLPKVTSISITVDQGKMIAEFIHDLREAIHPGNTAYKF 266 Query: 196 LSKVS 210 L +++ Sbjct: 267 LKRLA 271
>PERX_SOLTU (P12437) Suberization-associated anionic peroxidase (EC 1.11.1.7)| (POPA) (Fragment) Length = 351 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Frame = -3 Query: 172 ETRKGAADARL-LHDCFLDEC 113 ETR GA+ RL HDCF+D C Sbjct: 84 ETRMGASLIRLHFHDCFVDGC 104
>PER1_LYCES (P15003) Suberization-associated anionic peroxidase 1 precursor (EC| 1.11.1.7) (TMP1) Length = 364 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Frame = -3 Query: 172 ETRKGAADARL-LHDCFLDEC 113 ETR GA+ RL HDCF+D C Sbjct: 97 ETRMGASLIRLHFHDCFVDGC 117
>PER2_LYCES (P15004) Suberization-associated anionic peroxidase 2 precursor (EC| 1.11.1.7) (TMP2) Length = 363 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Frame = -3 Query: 172 ETRKGAADARL-LHDCFLDEC 113 ETR GA+ RL HDCF+D C Sbjct: 96 ETRMGASLIRLHFHDCFVDGC 116 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,942,874 Number of Sequences: 219361 Number of extensions: 709751 Number of successful extensions: 1935 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1912 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1934 length of database: 80,573,946 effective HSP length: 72 effective length of database: 64,779,954 effective search space used: 1554718896 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
