| Clone Name | rbaet62g11 |
|---|---|
| Clone Library Name | barley_pub |
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 68.6 bits (166), Expect = 4e-12 Identities = 31/33 (93%), Positives = 31/33 (93%) Frame = -3 Query: 330 AVQAAATGKGPLNNWATHLSDPLHTTIFDTFGS 232 AVQAAATGKGPLNNWATHLSDPLHTTI DTF S Sbjct: 254 AVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 286
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 68.6 bits (166), Expect = 4e-12 Identities = 31/33 (93%), Positives = 31/33 (93%) Frame = -3 Query: 330 AVQAAATGKGPLNNWATHLSDPLHTTIFDTFGS 232 AVQAAATGKGPLNNWATHLSDPLHTTI DTF S Sbjct: 257 AVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 289
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 39.3 bits (90), Expect = 0.002 Identities = 18/30 (60%), Positives = 18/30 (60%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIFDTF 238 VQ TGKGP N HLSDP H TI TF Sbjct: 221 VQHNVTGKGPFENLLQHLSDPWHNTIVQTF 250
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 37.0 bits (84), Expect = 0.012 Identities = 17/33 (51%), Positives = 21/33 (63%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIFDTFGSF 229 VQA TGKGPL N A HLSDP++ + +F Sbjct: 232 VQAIVTGKGPLENLADHLSDPVNNNAWSYATNF 264
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 36.2 bits (82), Expect = 0.021 Identities = 16/33 (48%), Positives = 22/33 (66%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIFDTFGSF 229 VQA TGKGPL N A HL+DP++ ++ +F Sbjct: 231 VQAIVTGKGPLENLADHLADPVNNNAWNFATNF 263
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 35.8 bits (81), Expect = 0.027 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIFDTFGSF 229 VQA TGKGPL N A HL+DP++ + +F Sbjct: 231 VQAIVTGKGPLENLADHLADPVNNNAWSYATNF 263
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 35.8 bits (81), Expect = 0.027 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIFDTFGSF 229 VQA TGKGPL N A HL+DP++ + +F Sbjct: 231 VQAIVTGKGPLENLADHLADPVNNNAWSYATNF 263
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 35.8 bits (81), Expect = 0.027 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIFDTFGSF 229 VQA TGKGPL N A HL+DP++ + +F Sbjct: 231 VQAIVTGKGPLENLADHLADPVNNNAWSYATNF 263
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 35.8 bits (81), Expect = 0.027 Identities = 16/27 (59%), Positives = 18/27 (66%) Frame = -3 Query: 324 QAAATGKGPLNNWATHLSDPLHTTIFD 244 Q+A G GPL N ATHL+DP H I D Sbjct: 210 QSAYLGTGPLENLATHLADPWHNNIGD 236
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 35.8 bits (81), Expect = 0.027 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIFDTFGSF 229 VQA TGKGPL N A HL+DP++ + +F Sbjct: 233 VQAIVTGKGPLENLADHLADPVNNNAWSYATNF 265
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 35.8 bits (81), Expect = 0.027 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIFDTFGSF 229 VQA TGKGPL N A HL+DP++ + +F Sbjct: 230 VQALVTGKGPLENLADHLADPVNNNAWSYATNF 262
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 35.8 bits (81), Expect = 0.027 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIFDTFGSF 229 VQA TGKGPL N A HL+DP++ + +F Sbjct: 230 VQAIVTGKGPLENLADHLADPVNNNAWSYATNF 262
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 35.8 bits (81), Expect = 0.027 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIFDTFGSF 229 VQA TGKGPL N A HL+DP++ + +F Sbjct: 80 VQAIVTGKGPLENLADHLADPVNNNAWSYATNF 112
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 231 VQAIVTGKGPLENLADHLADPVN 253
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 231 VQAIVTGKGPLENLADHLADPVN 253
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 231 VQAIVTGKGPLENLADHLADPVN 253
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 170 VQAIVTGKGPLENLADHLADPVN 192
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 219 VQAIVTGKGPLENLADHLADPVN 241
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 229 VQAIVTGKGPLENLADHLADPVN 251
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 229 VQAIVTGKGPLENLADHLADPVN 251
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 229 VQAIVTGKGPLENLADHLADPVN 251
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 229 VQAIVTGKGPLENLADHLADPVN 251
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 228 VQAIVTGKGPLENLADHLADPVN 250
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 229 VQAIVTGKGPLENLADHLADPVN 251
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 228 VQAIVTGKGPLENLADHLADPVN 250
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 88 VQAIVTGKGPLENLADHLADPVN 110
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 229 VQAIVTGKGPLENLADHLADPVN 251
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 220 VQAIVTGKGPLENLADHLADPVN 242
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 225 VQAIVTGKGPLENLADHLADPVN 247
>GAG_HTL1C (P14076) Gag polyprotein [Contains: Major core protein p19; Major| core protein p24; Nucleic acid-binding protein p15] Length = 429 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 P RP PP ST PP S + PP++ P+AP Sbjct: 95 PSRPAPPPPSSSTHDPPDSDPQIPPPYVEPTAP 127
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 230 VQAIVTGKGPLENLADHLADPVN 252
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 230 VQAIVTGKGPLENLADHLADPVN 252
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 35.4 bits (80), Expect = 0.036 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+DP++ Sbjct: 230 VQAIVTGKGPLENLADHLADPVN 252
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 34.7 bits (78), Expect = 0.061 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A H++DP++ Sbjct: 231 VQAIVTGKGPLENLADHIADPVN 253
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 34.7 bits (78), Expect = 0.061 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A H++DP++ Sbjct: 231 VQAIVTGKGPLENLADHIADPVN 253
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 34.7 bits (78), Expect = 0.061 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGP+ N A HL+DP++ Sbjct: 231 VQAIVTGKGPIENLADHLADPVN 253
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 34.7 bits (78), Expect = 0.061 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGP+ N A HL+DP++ Sbjct: 231 VQAIVTGKGPIENLADHLADPVN 253
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 34.7 bits (78), Expect = 0.061 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGP+ N A HL+DP++ Sbjct: 228 VQAIVTGKGPIENLADHLTDPVN 250
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 34.7 bits (78), Expect = 0.061 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGP+ N A HL+DP++ Sbjct: 242 VQAIVTGKGPIENLADHLADPVN 264
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 34.7 bits (78), Expect = 0.061 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGP+ N A HL+DP++ Sbjct: 242 VQAIVTGKGPIENLADHLADPVN 264
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 34.7 bits (78), Expect = 0.061 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A H++DP++ Sbjct: 229 VQAIVTGKGPLENLADHIADPVN 251
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 34.7 bits (78), Expect = 0.061 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A H++DP++ Sbjct: 226 VQAIVTGKGPLENLADHIADPVN 248
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 34.7 bits (78), Expect = 0.061 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGP+ N A HL+DP++ Sbjct: 238 VQAIVTGKGPIENLADHLADPVN 260
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 34.3 bits (77), Expect = 0.080 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL+N HL+DP++ Sbjct: 231 VQAIVTGKGPLDNLVDHLADPVN 253
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 34.3 bits (77), Expect = 0.080 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIFDTFGSF 229 +QA TGKGPL N A HL DP++ + +F Sbjct: 231 IQAIVTGKGPLENLADHLVDPVNNNAWSYATNF 263
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 34.3 bits (77), Expect = 0.080 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -3 Query: 312 TGKGPLNNWATHLSDPLHTTIFDTF 238 TG GP++N HL+DP H TIF F Sbjct: 243 TGTGPIDNLFAHLADPGHATIFAAF 267
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 34.3 bits (77), Expect = 0.080 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -3 Query: 312 TGKGPLNNWATHLSDPLHTTIFDTF 238 TG GP++N HL+DP H TIF F Sbjct: 243 TGTGPIDNLFAHLADPGHATIFAAF 267
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 33.9 bits (76), Expect = 0.10 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL++P++ Sbjct: 209 VQAIVTGKGPLENLADHLAEPVN 231
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 33.9 bits (76), Expect = 0.10 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDP 265 VQA TGKGP+ N A HL+DP Sbjct: 220 VQAIVTGKGPIQNLADHLADP 240
>LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large| tumor suppressor homolog 1) (WARTS protein kinase) Length = 1129 Score = 33.9 bits (76), Expect = 0.10 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = -1 Query: 320 PPPPARVRSTTGPPTSATRCTPPFLTPSAPFKWSVVEQ 207 PPPP +VRS T PP + PP T P W Q Sbjct: 236 PPPPPQVRSVTPPPPPRGQTPPPRGTTPPPPSWEPSSQ 273
>LATS1_HUMAN (O95835) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large| tumor suppressor homolog 1) (WARTS protein kinase) (h-warts) Length = 1130 Score = 33.5 bits (75), Expect = 0.14 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = -1 Query: 320 PPPPARVRSTTGPPTSATRCTPPFLTPSAPFKW 222 PPPP +VRS T PP + PP T P W Sbjct: 236 PPPPPQVRSVTPPPPPRGQTPPPRGTTPPPPSW 268
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 33.5 bits (75), Expect = 0.14 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPL 262 VQA TGKGP+ N A H++DP+ Sbjct: 228 VQAIVTGKGPIENLADHIADPV 249
>GAG_HTL1A (P03345) Gag polyprotein [Contains: Major core protein p19; Major| core protein p24; Nucleic acid-binding protein p15] Length = 429 Score = 33.5 bits (75), Expect = 0.14 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 P RP PP T PP S + PP++ P+AP Sbjct: 95 PSRPAPPPPSSPTHDPPDSDPQIPPPYVEPTAP 127
>GAG_HTL1M (P14077) Gag polyprotein [Contains: Major core protein p19; Major| core protein p24; Nucleic acid-binding protein p15] Length = 428 Score = 33.5 bits (75), Expect = 0.14 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 P RP PP T PP S + PP++ P+AP Sbjct: 94 PSRPAPPPPSSPTHDPPDSDPQIPPPYVEPTAP 126
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 33.5 bits (75), Expect = 0.14 Identities = 15/33 (45%), Positives = 20/33 (60%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIFDTFGSF 229 V A TGKGPL N A HL+DP++ + +F Sbjct: 192 VPAIVTGKGPLENLADHLADPVNNNAWSYATNF 224
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 32.7 bits (73), Expect = 0.23 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDP 265 VQA TGKGP+ N + HL+DP Sbjct: 229 VQAIVTGKGPIENLSDHLADP 249
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 32.7 bits (73), Expect = 0.23 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL + A H++DP++ Sbjct: 230 VQAIVTGKGPLEDLADHIADPVN 252
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 32.7 bits (73), Expect = 0.23 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPL 262 VQA TGKGPL N HL+DP+ Sbjct: 232 VQAIVTGKGPLENLNDHLADPV 253
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 32.7 bits (73), Expect = 0.23 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLH 259 VQA TGKGPL N A HL+ P++ Sbjct: 227 VQAIVTGKGPLENLADHLAGPVN 249
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 32.7 bits (73), Expect = 0.23 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPPFLTPSAPFKWS 219 P PPPP R RS T PP T PP +P ++S Sbjct: 580 PPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYS 616
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 32.7 bits (73), Expect = 0.23 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -3 Query: 324 QAAATGKGPLNNWATHLSDP 265 QA TG+GP+ NW HL DP Sbjct: 87 QAIVTGEGPVENWLYHLQDP 106
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 32.3 bits (72), Expect = 0.30 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIFDTFGSF 229 VQA TGKGP+ N HL+DP F + F Sbjct: 217 VQAIVTGKGPVQNLTDHLADPTVNKAFASATKF 249
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 32.3 bits (72), Expect = 0.30 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPL 262 VQA TGKGP+ N + H++DP+ Sbjct: 229 VQAIVTGKGPIENLSDHINDPV 250
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 32.3 bits (72), Expect = 0.30 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPL 262 VQA TGKGPL N HL DP+ Sbjct: 232 VQAIVTGKGPLENLFDHLDDPV 253
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 32.3 bits (72), Expect = 0.30 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDP 265 +QA TG+GP+ N A HLSDP Sbjct: 241 IQAYVTGEGPVENLAKHLSDP 261
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 32.3 bits (72), Expect = 0.30 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPL 262 VQA TGKGP+ N + H++DP+ Sbjct: 201 VQAIVTGKGPIENLSDHIADPV 222
>CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity factor 6| Length = 551 Score = 32.0 bits (71), Expect = 0.39 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%) Frame = -1 Query: 329 PCRPPPPARVRST--TGPPTSATRCTPPFLTPSAPF 228 P PPPP +V GPP R PP L P PF Sbjct: 249 PPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPF 284
>CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity factor 6| (Cleavage and polyadenylation specificity factor 68 kDa subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor Im 68-kDa subunit) (Protein HPBRII-4/7) Length = 551 Score = 32.0 bits (71), Expect = 0.39 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%) Frame = -1 Query: 329 PCRPPPPARVRST--TGPPTSATRCTPPFLTPSAPF 228 P PPPP +V GPP R PP L P PF Sbjct: 249 PPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPF 284
>CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity factor 6| Length = 551 Score = 32.0 bits (71), Expect = 0.39 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%) Frame = -1 Query: 329 PCRPPPPARVRST--TGPPTSATRCTPPFLTPSAPF 228 P PPPP +V GPP R PP L P PF Sbjct: 249 PPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPF 284
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 32.0 bits (71), Expect = 0.39 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPL 262 VQA TGKGP+ N HL+DP+ Sbjct: 229 VQAIVTGKGPIENLFDHLADPV 250
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 32.0 bits (71), Expect = 0.39 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPL 262 VQA TGKGP+ N HL+DP+ Sbjct: 230 VQAIVTGKGPIENLYDHLADPV 251
>SGS3_DROER (P13730) Salivary glue protein Sgs-3 precursor| Length = 328 Score = 32.0 bits (71), Expect = 0.39 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 6/63 (9%) Frame = -1 Query: 329 PCRPPPP--ARVRSTTGPPTSATRCTPPFLT----PSAPFKWSVVEQFLSAQLQNGRTRV 168 PC P A V +TT P + TRC PP T P+ P + + + +A+ RT V Sbjct: 36 PCTTARPTCAPVTTTTCRPPTTTRCPPPTTTRCPPPTRPAECTATTKRPTARPTTRRTTV 95 Query: 167 RVT 159 R T Sbjct: 96 RAT 98
>ENV2_MOUSE (P11370) Retrovirus-related Env polyprotein from Fv-4 locus| Length = 679 Score = 32.0 bits (71), Expect = 0.39 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 4/71 (5%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPPFLTPSAPFKWSVVEQFLS----AQLQNGRTRVRV 162 P RPPPP+ + TG P + P LTP+ P + ++ L+ A L T Sbjct: 285 PARPPPPSN-STPTGDPLTPPTGDP--LTPTKPPQAGTGDRLLNLVQGAYLALNMTNPTK 341 Query: 161 TNVLWFCMTSD 129 T W C+ S+ Sbjct: 342 TQECWLCLVSE 352
>CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity factor 6| Length = 552 Score = 32.0 bits (71), Expect = 0.39 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%) Frame = -1 Query: 329 PCRPPPPARVRST--TGPPTSATRCTPPFLTPSAPF 228 P PPPP +V GPP R PP L P PF Sbjct: 249 PPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPF 284
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 32.0 bits (71), Expect = 0.39 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPL 262 VQA TGKGP+ N HL+DP+ Sbjct: 114 VQAIVTGKGPIENLYDHLADPV 135
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 32.0 bits (71), Expect = 0.39 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIF 247 VQA TGKGP+ N HL++P F Sbjct: 238 VQAIVTGKGPIENLTDHLANPAENNAF 264
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 30.8 bits (68), Expect = 0.88 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = -1 Query: 332 SPCRPPPPARVRSTTGPPTSATRCTPPFLTPSAPFKWS 219 SP PPP R R+ T PP T PP +P ++S Sbjct: 560 SPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYS 597
>MAP1A_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A)| (Proliferation-related protein p80) [Contains: MAP1 light chain LC2] Length = 2805 Score = 30.8 bits (68), Expect = 0.88 Identities = 16/38 (42%), Positives = 17/38 (44%) Frame = -1 Query: 323 RPPPPARVRSTTGPPTSATRCTPPFLTPSAPFKWSVVE 210 RP PPA + GPPT A P APF W E Sbjct: 1850 RPLPPAPLSPAPGPPTPAPESHTP-----APFSWGTPE 1882
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.88 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPL 262 VQA TGKGP+ N H++DP+ Sbjct: 229 VQAIVTGKGPIENLYDHVADPV 250
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.88 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPL 262 VQA TGKGP+ N H++DP+ Sbjct: 229 VQAIVTGKGPIENLFDHVADPV 250
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.88 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPL 262 VQA TGKGP+ N H++DP+ Sbjct: 229 VQAIVTGKGPIQNLYDHVADPV 250
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 30.8 bits (68), Expect = 0.88 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPL 262 VQA TGKGPL N HL +P+ Sbjct: 229 VQAIVTGKGPLENLLDHLDNPV 250
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 30.8 bits (68), Expect = 0.88 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = -1 Query: 332 SPCRPPPPARVRSTTGPPTSATRCTPPFLTPSAPFKWS 219 SP PPP R R+ T PP T PP +P ++S Sbjct: 574 SPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYS 611
>APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa precursor| (45/47 kDa antigen) (Fibronectin attachment protein) (FAP-A) Length = 381 Score = 30.8 bits (68), Expect = 0.88 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 P R PPPA PP + PP + P+AP Sbjct: 93 PTRAPPPAGAPPNGAPPAAPNGAPPPPVDPNAP 125
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 30.8 bits (68), Expect = 0.88 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPL 262 VQA TGKGP+ N H++DP+ Sbjct: 227 VQAIVTGKGPIENLFDHVADPV 248
>GAH6_HUMAN (Q8N8A4) HERV-H_22q11.2 provirus ancestral Gag polyprotein (Gag| polyprotein) Length = 273 Score = 30.8 bits (68), Expect = 0.88 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Frame = -1 Query: 332 SPCRPPPPARVRSTTGPPTSATRCTPPFLTP---SAPFKWSVVEQFLSA 195 S PPP A R T P +++ TPP P S P WS + QF SA Sbjct: 135 SDLSPPPQAACRQTELSPNTSSASTPPPYNPSITSPPHTWSGL-QFSSA 182
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -1 Query: 317 PPPARVRSTTGPPTSATRCTPPFLTPSAP 231 PPP +T PPT+ T PP TPS P Sbjct: 1596 PPPT---TTPSPPTTTTTTPPPTTTPSPP 1621 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -1 Query: 320 PPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 P PP +T PPT+ T PP TPS P Sbjct: 1477 PSPPT---TTPSPPTTTTTTPPPTTTPSPP 1503 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = -1 Query: 320 PPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 P PP +T PPT T PP TPS P Sbjct: 1578 PSPPTT--TTPSPPTITTTTPPPTTTPSPP 1605 Score = 28.9 bits (63), Expect = 3.3 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Frame = -1 Query: 332 SPCRPP------PPARVRSTTGPPTSATRCTPPFLTPSAP 231 +P PP PP +T PPT+ T PP TPS P Sbjct: 1506 TPITPPASTTTLPPT---TTPSPPTTTTTTPPPTTTPSPP 1542 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 5/34 (14%) Frame = -1 Query: 317 PPPARVRS-----TTGPPTSATRCTPPFLTPSAP 231 PPP + T PPT+ T PP TPS P Sbjct: 1408 PPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSPP 1441 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -1 Query: 320 PPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 P PP +T PP + T PP TPS+P Sbjct: 1657 PSPPTT--TTPSPPITTTTTPPPTTTPSSP 1684 Score = 27.7 bits (60), Expect = 7.4 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 P P P +TT PPT T +PP TPS P Sbjct: 1450 PTTTPSPPISTTTTPPPT--TTPSPPTTTPSPP 1480 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -1 Query: 320 PPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 P PP +T PP + T PP TPS P Sbjct: 1399 PSPPT---TTPSPPPTTTTTLPPTTTPSPP 1425 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 P P P +TT PPT T +PP TP P Sbjct: 1598 PTTTPSPPTTTTTTPPPT--TTPSPPTTTPITP 1628
>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 501 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = -1 Query: 320 PPPPARVRSTTGPPTS-ATRCTPPFLTPSAP 231 PPPPAR R PP S A PP PS P Sbjct: 297 PPPPARGRGAPPPPPSRAPTAAPPPPPPSRP 327
>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 501 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = -1 Query: 320 PPPPARVRSTTGPPTS-ATRCTPPFLTPSAP 231 PPPPAR R PP S A PP PS P Sbjct: 297 PPPPARGRGAPPPPPSRAPTAAPPPPPPSRP 327
>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = -1 Query: 320 PPPPARVRSTTGPPTS-ATRCTPPFLTPSAP 231 PPPPAR R PP S A PP PS P Sbjct: 300 PPPPARGRGAPPPPPSRAPTAAPPPPPPSRP 330
>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = -1 Query: 320 PPPPARVRSTTGPPTS-ATRCTPPFLTPSAP 231 PPPPAR R PP S A PP PS P Sbjct: 300 PPPPARGRGAPPPPPSRAPTAAPPPPPPSRP 330
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTIF 247 VQA TGKGP+ N HL++P F Sbjct: 217 VQAIVTGKGPVQNLDDHLANPTVNNAF 243
>Y1583_RHOPA (Q6N9G6) UPF0283 membrane protein RPA1583| Length = 369 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 4/40 (10%) Frame = -1 Query: 320 PPPPARVRSTTG----PPTSATRCTPPFLTPSAPFKWSVV 213 PPPP R R PP SA + + P F+W V Sbjct: 54 PPPPPRARVELAREAEPPISAPKAPKSVINPKKGFRWGTV 93
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 29.6 bits (65), Expect = 2.0 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -3 Query: 327 VQAAATGKGPLNNWATHLSDPLHTTI 250 +QA TG GP N HL+DP++ + Sbjct: 241 IQALVTGVGPYQNLLDHLADPVNNNV 266
>TNR1A_BOVIN (O19131) Tumor necrosis factor receptor superfamily member 1A| precursor (p60) (TNF-R1) (TNF-RI) (TNFR-I) (p55) Length = 471 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 5/37 (13%) Frame = -1 Query: 326 CRPPPPARVR-STTGPPTSATRCTP----PFLTPSAP 231 C P PPA T GPP S CTP PSAP Sbjct: 328 CTPGPPASTHLCTPGPPASTHLCTPVQKWEASAPSAP 364
>CSKI1_RAT (Q8VHK2) Caskin-1 (CASK-interacting protein 1)| Length = 1430 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = -1 Query: 332 SPCRPPPPARVRSTTGPPT-SATRCTPPFLTPSAP 231 SP R PP A ++ + PP+ SA+ PP +P AP Sbjct: 1303 SPARQPPAALIKPASSPPSQSASPAKPP--SPGAP 1335
>KCNN1_HUMAN (Q92952) Small conductance calcium-activated potassium channel| protein 1 (SK1) Length = 561 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = -1 Query: 320 PPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 PPPP R GP A R +P TP AP Sbjct: 528 PPPPLPPRPGPGPQDQAARSSPCRWTPVAP 557
>LAD1_MOUSE (P57016) Ladinin 1 (Lad-1) (Linear IgA disease autoantigen)| Length = 528 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPPFLTPSAPFK 225 P + PP + +ST PPT A+R P L P K Sbjct: 325 PDKSPPSSAEQSTPAPPTKASRFPPITLQVKIPSK 359
>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)| (Trinucleotide repeat-containing gene 13 protein) Length = 1312 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 5/39 (12%) Frame = -1 Query: 332 SPCRPP---PPARVRSTTG--PPTSATRCTPPFLTPSAP 231 SPC P PP+R +S PP +AT PP PS P Sbjct: 553 SPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRP 591
>SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-related protein A)| Length = 1090 Score = 28.5 bits (62), Expect = 4.4 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = -1 Query: 317 PPPARVRSTTGPPTS---ATRCTPPFLTPSAPFKWSVVEQFLSAQLQNGRTRVRVT 159 PPPA GPP S A + TPP P F +V ++ +++ NG T T Sbjct: 210 PPPAG-----GPPPSRGPAPQKTPPRAAPPPSFNSAVNQEGITSNANNGSTAAHNT 260
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -1 Query: 332 SPCRPPPPARVRSTTGPPTSATRCTPPFLTPSA 234 +P RPPPPA V + P A +PP PS+ Sbjct: 19 APARPPPPAAVPAPAAGPAPAAG-SPPKRNPSS 50
>MURE_WOLSU (Q7M8F9) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 434 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +2 Query: 17 H*VTIGSYFTNHQVPAALLCDRTSIIIN-KGSLRYPLIHHSSYKTKARSLHG 169 H + + F + P + D + N + +L Y + H SSY KA SLHG Sbjct: 173 HYIQTKNSFFDDSTPKLINKDESKAKFNLQNALSYGIEHPSSYHVKAYSLHG 224
>PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor| Length = 1943 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%) Frame = -1 Query: 332 SPCRPPPPARVRST---TGPPTSATRCTPPFLTPSAP 231 SP PPPP V + + PPTS+ PP P P Sbjct: 1771 SPPNPPPPQLVTFSLPISTPPTSSLPLPPPLSLPPPP 1807
>MMPS3_MYCTU (P65378) Putative membrane protein mmpS3| Length = 299 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 4/34 (11%) Frame = -1 Query: 320 PPPPARVRSTTGPP--TSATRCTPP--FLTPSAP 231 PPPP +TT PP T+ T PP TP+ P Sbjct: 178 PPPPPPPATTTAPPPATTTTAAAPPPTTTTPTGP 211
>MMPS3_MYCBO (P65379) Putative membrane protein mmpS3| Length = 299 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 4/34 (11%) Frame = -1 Query: 320 PPPPARVRSTTGPP--TSATRCTPP--FLTPSAP 231 PPPP +TT PP T+ T PP TP+ P Sbjct: 178 PPPPPPPATTTAPPPATTTTAAAPPPTTTTPTGP 211
>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 543 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = -1 Query: 332 SPCRPPP---PARVRSTTGPPTSATRCTPPFLTPS 237 SP R PP PAR PP ++ TPP +P+ Sbjct: 10 SPARTPPQASPARTSPARAPPQASPARTPPQASPA 44
>MILK1_MOUSE (Q8BGT6) Molecule interacting with Rab13 (MIRab13) (MICAL-like| protein 1) Length = 870 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 12/64 (18%) Frame = -1 Query: 332 SPCRPPPPARVRSTTGPP-----------TSATRCTPPFLTPSAPFKW-SVVEQFLSAQL 189 +P +PP P++ + PP + ++ TPP P + + VEQ +S+ L Sbjct: 276 TPTKPPLPSKPQELASPPGGRPTPAPRKASESSALTPPTPRPRSSLQQDGTVEQSVSSGL 335 Query: 188 QNGR 177 NGR Sbjct: 336 VNGR 339
>HXA3_HUMAN (O43365) Homeobox protein Hox-A3 (Hox-1E)| Length = 443 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 P PPPP PP A + PP TP+AP Sbjct: 89 PLHPPPPQAAPPAPQPPQPAPQ--PPAPTPAAP 119
>CABL2_HUMAN (Q9BTV7) CDK5 and ABL1 enzyme substrate 2 (Interactor with CDK3 2)| (Ik3-2) Length = 478 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/55 (32%), Positives = 21/55 (38%) Frame = -1 Query: 320 PPPPARVRSTTGPPTSATRCTPPFLTPSAPFKWSVVEQFLSAQLQNGRTRVRVTN 156 PPPPA R PP P TP+ S + L R R RVT+ Sbjct: 72 PPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGLDGQRQRKRVTS 126
>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1096 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 5/52 (9%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSAT--RCTPPFLTPSA---PFKWSVVEQFLSAQL 189 P PPPPA + TT PP S + +P L P + F SVV+ LS+ L Sbjct: 675 PPPPPPPAPEQQTTPPPGSPSGGTASPGGLGPESLPPEFFTSVVQGVLSSLL 726
>RHG06_HUMAN (O43182) Rho-GTPase-activating protein 6 (Rho-type| GTPase-activating protein RhoGAPX-1) Length = 974 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 6/39 (15%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPP------FLTPSAP 231 P P S+ GPP ATR PP F TPS P Sbjct: 71 PAESLGPRLASSSRGPPPRATRLPPPGPLCSSFSTPSTP 109
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -3 Query: 324 QAAATGKGPLNNWATHLSDPLHTTIFDTFGSF*VVGGRAVFVSSAAK 184 Q ATG+ PL N + HL++P+ I A+F SS AK Sbjct: 331 QYLATGESPLANLSAHLANPIGANITTNL---------AMFASSGAK 368
>PXK_MOUSE (Q8BX57) PX domain-containing protein kinase-like protein| (Modulator of Na,K-ATPase) (MONaKA) Length = 582 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%) Frame = -1 Query: 329 PCRPPPPARVRSTTGP-PTSATRCTPPFL 246 P PPPP GP PTSAT PFL Sbjct: 516 PPPPPPPPPPPPPAGPSPTSATEMPAPFL 544
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 6/34 (17%) Frame = -1 Query: 320 PPPPARVR----STTGPPTSATRCTP--PFLTPS 237 PPPP+ R T PP +A + TP P LTP+ Sbjct: 1212 PPPPSSPRVITPPKTSPPANAAKVTPLKPVLTPT 1245
>HLX1_MOUSE (Q61670) Homeobox protein HLX1| Length = 476 Score = 28.1 bits (61), Expect = 5.7 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%) Frame = -1 Query: 323 RPPPPARVRSTTGPPTSATRCTPPFLTPSAPFKWSV-----VEQFLSAQ----LQNGRTR 171 +PPPP R S PPTS TR P + SAP S +++ LSA+ ++ G T Sbjct: 136 QPPPPPRAVSLQ-PPTSGTRVVPHH-SGSAPAPSSKDLKFGIDRILSAEFDPKVKEGNTL 193 Query: 170 VRVTNVL 150 +T++L Sbjct: 194 RDLTSLL 200
>V70K_TYMVA (P20131) 69 kDa protein| Length = 628 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 3/30 (10%) Frame = -1 Query: 320 PPPPARVRSTTGPPTSATR---CTPPFLTP 240 PPPP R+ S PP S R TP F TP Sbjct: 436 PPPPRRLPSPATPPQSPLRDLGRTPSFPTP 465
>TSN32_HUMAN (Q96QS1) Tetraspanin-32 (Protein Phemx)| Length = 320 Score = 28.1 bits (61), Expect = 5.7 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +2 Query: 260 CSGSLRWVAQLLSGPLPVAAACTA 331 CSGSLRW+ + + PLP++ A Sbjct: 275 CSGSLRWLQESDAAPLPLSCHLAA 298
>SAM68_MOUSE (Q60749) KH domain-containing, RNA-binding, signal| transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP-associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68) Length = 443 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%) Frame = -1 Query: 332 SPCRPPPPARVRSTTGPPTSATRCTP-PFLTPSA 234 SP PPP ST GP + P P L PSA Sbjct: 58 SPATQPPPLLPPSTPGPDATVVGSAPTPLLPPSA 91
>LCE3D_HUMAN (Q9BYE3) Late cornified envelope protein 3D (Late envelope protein| 16) (Small proline-rich-like epidermal differentiation complex protein 6A) (Small proline-rich-like epidermal differentiation complex protein 6B) Length = 92 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -1 Query: 326 CRPPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 C+PPP + S PP S +C PP + AP Sbjct: 10 CQPPP--KCPSPKCPPKSPVQCLPPASSGCAP 39
>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1183 Score = 27.7 bits (60), Expect = 7.4 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 14/46 (30%) Frame = -1 Query: 320 PPPPARVRSTTGPPTSATRC--------------TPPFLTPSAPFK 225 PPPPA TTGPP +AT+ PP +PS P K Sbjct: 702 PPPPAA--PTTGPPLTATQIKQEPAEEYETPESPVPPARSPSPPPK 745
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -1 Query: 332 SPCRPPPPARVRSTTGPPTSATRCTPP 252 SP PPP S T PP A+R +PP Sbjct: 447 SPLSPPPE---ESPTSPPPEASRLSPP 470
>TMPS9_HUMAN (Q7Z410) Transmembrane protease, serine 9 (EC 3.4.21.-)| (Polyserase-1) (Polyserase-I) (Polyserine protease 1) [Contains: Serase-1; Serase-2; Serase-3] Length = 1059 Score = 27.7 bits (60), Expect = 7.4 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 P PP R+ +TT P T+A T P TPS P Sbjct: 741 PMSPPSTTRMLATTSPRTTA-GLTVPGATPSRP 772
>HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24)| Length = 488 Score = 27.7 bits (60), Expect = 7.4 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 10/68 (14%) Frame = -1 Query: 323 RPPPPARVRSTTGPPTSATRCTP-PFLTPSAPFKWSV-----VEQFLSAQ----LQNGRT 174 +PPPP R + PP S TR P P + SAP S +++ LSA+ ++ G T Sbjct: 137 QPPPPPRAGALQ-PPASGTRVVPNPHHSGSAPAPSSKDLKFGIDRILSAEFDPKVKEGNT 195 Query: 173 RVRVTNVL 150 +T++L Sbjct: 196 LRDLTSLL 203
>SPR2H_MOUSE (O70559) Small proline-rich protein 2H| Length = 108 Score = 27.7 bits (60), Expect = 7.4 Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 3/36 (8%) Frame = -1 Query: 329 PCRPPP---PARVRSTTGPPTSATRCTPPFLTPSAP 231 PC+PPP P + PP C PP T P Sbjct: 11 PCQPPPVCPPPQCPEPCPPPKCPEPCPPPKCTEPCP 46
>DMDB_DROME (Q9VDW3) Dystrophin, isoform B| Length = 1669 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -1 Query: 320 PPPPARVRSTTGPPTSATRCTPPFLTPSAP 231 PPPP + + + +A RC+ PF P P Sbjct: 159 PPPPEKHSTLSAEGMAARRCSNPFEMPPPP 188
>FOXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) (HFK1) Length = 477 Score = 27.7 bits (60), Expect = 7.4 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = +1 Query: 217 TDHLKGAEGVKNGGVQRVAEVG--GPVVERTLAGGGG 321 TDH + G K GG R E+G GP + AG GG Sbjct: 105 TDHHRPPSGAKAGGCCRPGELGPVGPDEKEKGAGAGG 141
>PCD15_HUMAN (Q96QU1) Protocadherin-15 precursor| Length = 1955 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = -1 Query: 332 SPCRPPPPARVRSTTGPPTSATRCTPPFLTPSAPF 228 S C PPP + + PP A PP ++P + F Sbjct: 1743 SACPLPPPPPISPPSPPPAPAPLAPPPDISPFSLF 1777
>GUNB_CELFI (P26225) Endoglucanase B precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase B) (Cellulase B) Length = 1045 Score = 27.7 bits (60), Expect = 7.4 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 5/53 (9%) Frame = +2 Query: 137 SYKTKARSLHGR-----AFVHFAAELTKTARPPTT*KEPKVSKMVVCSGSLRW 280 SY KA+ + G A V F + T PPTT P S + +L W Sbjct: 717 SYVVKAKDVAGNVSAASAAVTFTTDTTGETEPPTTPGTPVASAVTSTGATLAW 769
>RGS11_HUMAN (O94810) Regulator of G-protein signaling 11 (RGS11)| Length = 467 Score = 27.7 bits (60), Expect = 7.4 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = -1 Query: 323 RPPPPARVRSTTGPPTSATRCTPPFLTPSAPFKWSVVEQFLSAQLQNGRTRVR 165 RPPP A GP + + +T SA F +E F A GRTRV+ Sbjct: 194 RPPPGAPDVLEQGPGRGSCAASRVLMTKSADFHKREIEYFRKAL---GRTRVK 243
>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1| Length = 574 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 5/35 (14%) Frame = -1 Query: 320 PPPPARVRSTTG---PPTSATRC--TPPFLTPSAP 231 PPPP R +TG PP S++R PP P+ P Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
>EXPA_DROME (Q07436) Protein expanded| Length = 1427 Score = 27.3 bits (59), Expect = 9.7 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = -1 Query: 329 PCRPP-PPARVRSTTGPPTSATRCTPPFLTPSAPFKWSVVEQFLSA 195 PC PP PPA + + PP R PP+ S P S++ SA Sbjct: 822 PCSPPVPPAPIPAP--PPAIRRRDPPPYSISSKPRPTSLISVSSSA 865
>CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity factor 6| Length = 548 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%) Frame = -1 Query: 329 PCRPPPPARVRSTT--GPPTSATRCTPPFLTPSAPF 228 P PPPP + GPP R PP + P P+ Sbjct: 250 PPGPPPPGQPLPPPLPGPPNRGERPPPPVMFPGQPY 285
>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1185 Score = 27.3 bits (59), Expect = 9.7 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 14/49 (28%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRC--------------TPPFLTPSAPFK 225 P PPPPA S GPP SAT+ PP +PS P K Sbjct: 701 PSLPPPPAAPAS--GPPLSATQIKQEPAEEYETPESPVPPARSPSPPPK 747
>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1| light chain LC2] Length = 2774 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/38 (36%), Positives = 16/38 (42%) Frame = -1 Query: 323 RPPPPARVRSTTGPPTSATRCTPPFLTPSAPFKWSVVE 210 RP PPA + PPT A P PF W + E Sbjct: 1816 RPLPPAPLSPAPAPPTPAPEPHTP-----VPFSWGLAE 1848
>CSKI1_MOUSE (Q6P9K8) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = -1 Query: 332 SPCRPPPPARVRSTTGPPT-SATRCTPPFLTPSAP 231 SP R PP A ++ + PP+ SA+ PP +P P Sbjct: 1304 SPARQPPAALIKPASSPPSQSASPVKPP--SPGTP 1336
>NIFH_CLOCB (Q59270) Nitrogenase iron protein (EC 1.18.6.1) (Nitrogenase| component II) (Nitrogenase Fe protein) (Nitrogenase reductase) Length = 271 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = +2 Query: 50 HQVPAALLCDRTSIIINKGSLRYPLIHHSSYKTKARSLHG 169 H VPA + C R I + S P+ Y+T AR + G Sbjct: 206 HFVPATMRCRRRKSIKRQLSTFRPMTQADEYRTLARKIDG 245
>APA_MYCTU (Q50906) Alanine and proline-rich secreted protein apa precursor| (45/47 kDa antigen) (Fibronectin attachment protein) (Immunogenic protein MPT32) (Antigen MPT-32) (45-kDa glycoprotein) (FAP-B) Length = 325 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 9/43 (20%) Frame = -1 Query: 332 SPCRPPPPARVRSTTG---------PPTSATRCTPPFLTPSAP 231 +P PPPPA + PP PP + P+AP Sbjct: 66 TPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAP 108
>APA_MYCBO (O30620) Alanine and proline-rich secreted protein apa precursor| (Fibronectin attachment protein) (45/47 kDa antigen) (FAP-B) Length = 325 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 9/43 (20%) Frame = -1 Query: 332 SPCRPPPPARVRSTTG---------PPTSATRCTPPFLTPSAP 231 +P PPPPA + PP PP + P+AP Sbjct: 66 TPVAPPPPAAANTPNAQPGDPNAAPPPADPNAPPPPVIAPNAP 108
>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1186 Score = 27.3 bits (59), Expect = 9.7 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 14/49 (28%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRC--------------TPPFLTPSAPFK 225 P PPPPA S GPP SAT+ PP +PS P K Sbjct: 702 PSLPPPPAAPAS--GPPLSATQIKQEPAEEYETPESPVPPARSPSPPPK 748
>VP40_HCMVA (P16753) Capsid protein P40 [Contains: Assemblin (Protease) (EC| 3.4.21.97); Capsid assembly protein; Gene UL80 protein; Gene UL80.5 protein; C-terminal peptide] Length = 708 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPPFLTPSAPFKWSVVEQFLSA 195 P PP P + + P+ +PP L+PS P + + + LSA Sbjct: 298 PVEPPSPVQPPALPASPSVLPAESPPSLSPSEPAEAASMSHPLSA 342
>SELV_HUMAN (P59797) Selenoprotein V| Length = 346 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = -1 Query: 329 PCRPPPPARVRSTTGPPTSATRCTPPFLTPS 237 P P P VR+ T PT A TPP P+ Sbjct: 94 PTPVPTPVPVRNPTPVPTPARTLTPPVRVPA 124
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = -1 Query: 320 PPPPARVRSTTGPPTSATRCTPP 252 PPPP V+ T PP+ + PP Sbjct: 206 PPPPTHVQPTPSPPSRGHQPQPP 228 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,419,891 Number of Sequences: 219361 Number of extensions: 994043 Number of successful extensions: 4647 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 3785 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4540 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)