>emb|X93170.1|HV1433B H.vulgare mRNA for Hv14-3-3b
          Length = 1136

 Score =  502 bits (253), Expect = e-139
 Identities = 262/265 (98%)
 Strand = Plus / Minus

                                                                        
Query: 27   tggaaagggttcagaagacgcccttcctaaagaagaaaagcagatgaatagacagggggc 86
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1136 tggaaagggttcagaagacgcccttcctaaagaagaaaagcagatgaatagacaaggggc 1077

                                                                        
Query: 87   cacacagacaagagcagcagaaatttctagaaccaccaaagtaacaggaaggttcaacaa 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 cacacagacaagagcagcagaaatttctagaaccaccaaagtaacaggaaggttcaacaa 1017

                                                                        
Query: 147  gaggcaataaccagtgcagcccgataacaaagcagggcaggcagctacaagcttccctat 206
            |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 1016 gaggcaataaccagtgcagcccgataaccaagcaaggcaggcagctacaagcttccctat 957

                                                                        
Query: 207  cacaacacaaattggagcctccaattaccaacaaccacactgacgacattacaatctaca 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956  cacaacacaaattggagcctccaattaccaacaaccacactgacgacattacaatctaca 897

                                     
Query: 267  ctgaacaagcaagaaagacaagttt 291
            |||||||||||||||||||||||||
Sbjct: 896  ctgaacaagcaagaaagacaagttt 872

>gb|BC072895.1| Xenopus laevis MGC80334 protein, mRNA (cDNA clone MGC:80334
           IMAGE:5074110), complete cds
          Length = 1014

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 90  acagacaagagcagcagaaa 109
           ||||||||||||||||||||
Sbjct: 959 acagacaagagcagcagaaa 940

>gb|AC122922.4| Mus musculus BAC clone RP23-34M5 from chromosome 1, complete sequence
          Length = 223959

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    caaagcagggcaggcagcta 193
              ||||||||||||||||||||
Sbjct: 217677 caaagcagggcaggcagcta 217658

>gb|AC131099.4| Mus musculus BAC clone RP23-15N12 from chromosome 13, complete sequence
          Length = 208298

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     aaagaagaaaagcagatgaa 74
              ||||||||||||||||||||
Sbjct: 178999 aaagaagaaaagcagatgaa 178980

>ref|XM_652867.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0355.2), mRNA
          Length = 2631

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 ggcaataaccagtgcagccc 168
           ||||||||||||||||||||
Sbjct: 754 ggcaataaccagtgcagccc 773

>gb|AC123549.5| Mus musculus BAC clone RP24-91K17 from chromosome 6, complete sequence
          Length = 182759

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   aattaccaacaaccacactg 248
             ||||||||||||||||||||
Sbjct: 53164 aattaccaacaaccacactg 53145

>gb|AC104872.8| Mus musculus chromosome 12, clone RP23-360C2, complete sequence
          Length = 196850

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    cacaacacaaattggagcct 226
              ||||||||||||||||||||
Sbjct: 119229 cacaacacaaattggagcct 119248

>gb|AC105951.9| Mus musculus chromosome 5, clone RP23-475D21, complete sequence
          Length = 178610

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     taaagaagaaaagcagatga 73
              ||||||||||||||||||||
Sbjct: 170803 taaagaagaaaagcagatga 170822

>emb|AL359874.9| Human DNA sequence from clone RP11-3K22 on chromosome 1, complete
             sequence
          Length = 79946

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   accaaagtaacaggaaggtt 140
             ||||||||||||||||||||
Sbjct: 46265 accaaagtaacaggaaggtt 46246

>ref|XM_793496.1| PREDICTED: Strongylocentrotus purpuratus similar to MoKA (LOC594045),
            mRNA
          Length = 3042

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 77   gacagggggccacacagaca 96
            ||||||||||||||||||||
Sbjct: 1642 gacagggggccacacagaca 1661

>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete
            sequence
          Length = 984602

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 268  tgaacaagcaagaaagacaa 287
            ||||||||||||||||||||
Sbjct: 8811 tgaacaagcaagaaagacaa 8830

>gb|AC005868.1| Homo sapiens 12q24.2 PAC RPCI5-944M2 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 96180

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 158   cagtgcagcccgataacaaagcag 181
             ||||||||||||||| ||||||||
Sbjct: 52646 cagtgcagcccgatagcaaagcag 52623

>gb|AC090835.7| Homo sapiens chromosome 11, clone RP11-7O20, complete sequence
          Length = 167437

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     agattcagcaaagtggaaag 33
              ||||||||||||||||||||
Sbjct: 154620 agattcagcaaagtggaaag 154639

>gb|AC121493.1| Homo sapiens chromosome 3 clone RP11-88H12, complete sequence
          Length = 178780

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    ccacacagacaagagcagca 105
             ||||||||||||||||||||
Sbjct: 71782 ccacacagacaagagcagca 71763

>gb|AC103921.2| Homo sapiens chromosome 3 clone RP11-131O21, complete sequence
          Length = 156264

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 98    gagcagcagaaatttctagaacca 121
             |||||||||||||||| |||||||
Sbjct: 77677 gagcagcagaaatttcaagaacca 77654

>gb|AC103587.2| Homo sapiens chromosome 3 clone RP11-164G20, complete sequence
          Length = 133921

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 98     gagcagcagaaatttctagaacca 121
              |||||||||||||||| |||||||
Sbjct: 121198 gagcagcagaaatttcaagaacca 121175

>gb|AC018795.10| Homo sapiens chromosome 11, clone RP11-699C18, complete sequence
          Length = 187836

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     agattcagcaaagtggaaag 33
              ||||||||||||||||||||
Sbjct: 151811 agattcagcaaagtggaaag 151792

>gb|AC153150.5| Mus musculus BAC clone RP23-181B14 from chromosome 13, complete
             sequence
          Length = 212639

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    aaagaagaaaagcagatgaa 74
             ||||||||||||||||||||
Sbjct: 92999 aaagaagaaaagcagatgaa 93018

>gb|AC179924.2| Mus musculus BAC clone RP23-270O20 from chromosome 12, complete
             sequence
          Length = 217229

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   cacaacacaaattggagcct 226
             ||||||||||||||||||||
Sbjct: 38595 cacaacacaaattggagcct 38576

>gb|AC171014.3| Gallus gallus BAC clone CH261-89A18 from chromosome ul, complete sequence
          Length = 181265

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    cactgaacaagcaagaaaga 284
              ||||||||||||||||||||
Sbjct: 179221 cactgaacaagcaagaaaga 179240

>emb|BX005073.7| Zebrafish DNA sequence from clone CH211-129N18, complete sequence
          Length = 185849

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    tagacagggggccacacaga 94
             ||||||||||||||||||||
Sbjct: 97167 tagacagggggccacacaga 97186

>emb|CR855299.12| Zebrafish DNA sequence from clone CH211-199C22 in linkage group 16,
             complete sequence
          Length = 116933

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    aaagaagaaaagcagatgaa 74
             ||||||||||||||||||||
Sbjct: 89483 aaagaagaaaagcagatgaa 89502

>gb|AC119809.10| Mus musculus chromosome 1, clone RP24-505E24, complete sequence
          Length = 154931

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   caaagcagggcaggcagcta 193
             ||||||||||||||||||||
Sbjct: 55294 caaagcagggcaggcagcta 55313

>emb|CT030697.6| Mouse DNA sequence from clone RP23-274A4 on chromosome 12, complete
              sequence
          Length = 198527

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    cacaacacaaattggagcct 226
              ||||||||||||||||||||
Sbjct: 129977 cacaacacaaattggagcct 129958

>gb|AC122464.3| Mus musculus BAC clone RP24-301O17 from 6, complete sequence
          Length = 168611

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     aaagaagaaaagcagatgaa 74
              ||||||||||||||||||||
Sbjct: 102985 aaagaagaaaagcagatgaa 103004

>gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, complete sequence
          Length = 262831

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     taaagaagaaaagcagatga 73
              ||||||||||||||||||||
Sbjct: 209485 taaagaagaaaagcagatga 209466


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,161,177
Number of Sequences: 3902068
Number of extensions: 3161177
Number of successful extensions: 67576
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67530
Number of HSP's gapped (non-prelim): 46
length of query: 291
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 269
effective length of database: 17,147,199,772
effective search space: 4612596738668
effective search space used: 4612596738668
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)