>gb|AC025571.20| Homo sapiens 3 BAC RP11-515C21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159902

 Score = 46.1 bits (23), Expect = 0.049
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 189   cactcacatgcatgcacagacac 211
             |||||||||||||||||||||||
Sbjct: 66965 cactcacatgcatgcacagacac 66987

>emb|AL355602.11| Human DNA sequence from clone RP5-1166F10 on chromosome 1 Contains the
             3' end of a novel gene (FLJ36179), complete sequence
          Length = 99163

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 188   tcactcacatgcatgcacagacact 212
             |||||||||| ||||||||||||||
Sbjct: 79173 tcactcacatacatgcacagacact 79197

>emb|AL591544.30| Mouse DNA sequence from clone RP23-386D6 on chromosome 11, complete
             sequence
          Length = 201673

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 192   tcacatgcatgcacagacact 212
             |||||||||||||||||||||
Sbjct: 42516 tcacatgcatgcacagacact 42536

>gb|AC106834.9| Mus musculus chromosome 19, clone RP24-132H7, complete sequence
          Length = 177277

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 193    cacatgcatgcacagacactgaac 216
              |||||||||||||| |||||||||
Sbjct: 133853 cacatgcatgcacacacactgaac 133830

>gb|AC099594.6| Mus musculus chromosome 15, clone RP23-458G7, complete sequence
          Length = 220242

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 189   cactcacatgcatgcacagacact 212
             |||||||||||||||||| |||||
Sbjct: 80533 cactcacatgcatgcacacacact 80510

>gb|AC148980.6| Mus musculus BAC clone RP23-230C16 from chromosome 7, complete sequence
          Length = 192433

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    ctcactcacatgcatgcaca 206
              ||||||||||||||||||||
Sbjct: 116770 ctcactcacatgcatgcaca 116751

>gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, complete sequence
          Length = 245390

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 193   cacatgcatgcacagacactgaac 216
             |||||||||||||| |||||||||
Sbjct: 46326 cacatgcatgcacacacactgaac 46303

>gb|AC124502.4| Mus musculus BAC clone RP23-414G6 from chromosome 19, complete sequence
          Length = 219212

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    ctcactcacatgcatgcaca 206
              ||||||||||||||||||||
Sbjct: 125201 ctcactcacatgcatgcaca 125182

>gb|AC011352.6| Homo sapiens chromosome 5 clone CTC-327F10, complete sequence
          Length = 166644

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 193   cacatgcatgcacagacactgaac 216
             |||||||||||||| |||||||||
Sbjct: 86180 cacatgcatgcacacacactgaac 86203

>gb|AC155171.7| Mus musculus BAC clone RP23-100A10 from chromosome 7, complete sequence
          Length = 193027

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    ctcactcacatgcatgcaca 206
              ||||||||||||||||||||
Sbjct: 182495 ctcactcacatgcatgcaca 182514

>emb|AL096708.34|HS1179L24 Human DNA sequence from clone RP5-1179L24 on chromosome 6q24.3-25.3
             Contains the PPP1R14C gene for protein phosphatase 1
             regulatory (inhibitor) subunit 14C (KEPI NY-BR-81
             CPI17-like), complete sequence
          Length = 107104

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ctcactcacatgcatgcaca 206
             ||||||||||||||||||||
Sbjct: 32888 ctcactcacatgcatgcaca 32869

>emb|AL031119.1|HS28C20 Human DNA sequence from clone RP1-28C20 on chromosome 6q24 Contains the
              3' end of a variant of the EPM2A gene for progressive
              myoclonus type 2 epilepsy (Lafora disease) protein
              (laforin) and a BTB/POZ domain zinc finger protein
              pseudogene, complete sequence
          Length = 115835

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    tgcatgcacagacactgaac 216
              ||||||||||||||||||||
Sbjct: 106284 tgcatgcacagacactgaac 106265

>gb|AC011424.4| Homo sapiens chromosome 5 clone P1_1242F12, complete sequence
          Length = 84991

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 10    aataaattaataattcatgctcca 33
             |||| |||||||||||||||||||
Sbjct: 49447 aatagattaataattcatgctcca 49424

>gb|AF407166.1| Homo sapiens PKC-potentiated PP1 inhibitory protein (KEPI) gene,
             complete cds
          Length = 168856

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ctcactcacatgcatgcaca 206
             ||||||||||||||||||||
Sbjct: 94640 ctcactcacatgcatgcaca 94621

>gb|AC127352.5| Mus musculus BAC clone RP23-81P4 from chromosome 7, complete sequence
          Length = 196031

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    ctcactcacatgcatgcaca 206
              ||||||||||||||||||||
Sbjct: 142442 ctcactcacatgcatgcaca 142461

>gb|AC012368.6| Homo sapiens BAC clone RP11-547M24 from 2, complete sequence
          Length = 196206

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    cacatgcatgcacagacact 212
              ||||||||||||||||||||
Sbjct: 179733 cacatgcatgcacagacact 179714

>emb|BX897748.11| Zebrafish DNA sequence from clone CH211-152M4 in linkage group 4,
             complete sequence
          Length = 64422

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 189   cactcacatgcatgcacagacact 212
             |||||||||||||||||| |||||
Sbjct: 53392 cactcacatgcatgcacatacact 53369

>emb|BX663521.10| Zebrafish DNA sequence from clone DKEYP-50F5 in linkage group 14,
              complete sequence
          Length = 179663

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     cggttttacaggttcaatcc 77
              ||||||||||||||||||||
Sbjct: 113082 cggttttacaggttcaatcc 113101

>emb|CR847890.19| Zebrafish DNA sequence from clone DKEYP-70H9 in linkage group 14,
             complete sequence
          Length = 217550

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     acaataaattaataattcat 27
             ||||||||||||||||||||
Sbjct: 64381 acaataaattaataattcat 64400

>gb|AC164107.3| Mus musculus BAC clone RP23-461D6 from chromosome 14, complete sequence
          Length = 181095

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    cactcacatgcatgcacaga 208
              ||||||||||||||||||||
Sbjct: 125435 cactcacatgcatgcacaga 125416

>gb|AC140393.3| Mus musculus BAC clone RP24-179D17 from 14, complete sequence
          Length = 184279

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 189    cactcacatgcatgcacagacact 212
              |||||||||||||||||| |||||
Sbjct: 101679 cactcacatgcatgcacacacact 101656

>emb|AL732614.15| Mouse DNA sequence from clone RP23-322G17 on chromosome 4, complete
              sequence
          Length = 218910

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    ctcactcacatgcatgcaca 206
              ||||||||||||||||||||
Sbjct: 112895 ctcactcacatgcatgcaca 112914

>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete
              sequence
          Length = 218753

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      cacacaataaattaataatt 24
              ||||||||||||||||||||
Sbjct: 208348 cacacaataaattaataatt 208329

>gb|AC002209.1|AC002209 Homo sapiens (subclone 2_e10 from P1 H31) DNA sequence, complete
            sequence
          Length = 4858

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 10   aataaattaataattcatgctcca 33
            |||| |||||||||||||||||||
Sbjct: 4251 aatagattaataattcatgctcca 4274

>emb|AL928882.10| Mouse DNA sequence from clone RP23-281I20 on chromosome 2, complete
             sequence
          Length = 147002

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     acacaataaattaataattc 25
             ||||||||||||||||||||
Sbjct: 83233 acacaataaattaataattc 83214

>emb|AL669926.6| Mouse DNA sequence from clone RP23-74K21 on chromosome 2, complete
              sequence
          Length = 226854

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 189    cactcacatgcatgcacagacact 212
              |||||||||||||||||| |||||
Sbjct: 145489 cactcacatgcatgcacacacact 145466


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,137,382
Number of Sequences: 3902068
Number of extensions: 2137382
Number of successful extensions: 55109
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55065
Number of HSP's gapped (non-prelim): 44
length of query: 235
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 213
effective length of database: 17,147,199,772
effective search space: 3652353551436
effective search space used: 3652353551436
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)