>IRA2_YEAST (P19158) Inhibitory regulator protein IRA2|
          Length = 3079

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +3

Query: 213  RPQSESTSATPFSLLNFSCRKMTASTSVTGMKTAMRIPAKRVWTQK 350
            RPQ+ES SATP ++ N        ST ++     +R P +++ T++
Sbjct: 979  RPQTESISATPMAITN--------STPLSSAAFGIRSPLQKIRTRR 1016

>DPOE_YARLI (Q6C4J0) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)|
            (DNA polymerase II subunit A)
          Length = 2183

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 343  VHTLFAGILIAVFIPVTEVLAVIFLHEKFSSEK 245
            VH + + + I V  P  +  A++F+H+  SSEK
Sbjct: 1478 VHVVSSAVEIFVITPTWDAPALVFVHQSSSSEK 1510

>Y305_METJA (Q57753) Hypothetical protein MJ0305|
          Length = 395

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = -2

Query: 349 FCVHTLFAGILIAV---FIPVTEVLAVIFLHEKFSSEKG-VALVLSLWG 215
           +C+ TL  GIL+AV   FIP    + +    E F  E   V LVL L G
Sbjct: 247 YCIKTLIGGILVAVISYFIPEVMGMGLTLTKELFIMEFSLVFLVLLLIG 295

>ATR_MOUSE (Q9JKK8) Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia|
           telangiectasia and Rad3-related protein)
          Length = 2635

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 123 CTLICKLVFCFPSRNPDLY 67
           C +IC L+F F S+NP ++
Sbjct: 127 CEVICSLLFLFKSKNPAIF 145

>Y1319_METJA (Q58715) Hypothetical sodium-dependent transporter MJ1319|
          Length = 492

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -2

Query: 358 GVIFCVHTLFAGILIAVFIPVTEVLAVIFLHEKFSSEKGVALVLSL 221
           G++F +  +FAGI  AV I    V A+I   +KFS  +  AL+  L
Sbjct: 321 GIVFFLALVFAGISSAVSIVEASVSAII---DKFSLSRKKALLAVL 363


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,932,814
Number of Sequences: 219361
Number of extensions: 445052
Number of successful extensions: 1321
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)