ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet62b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein 472 e-130
2gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intr... 113 3e-22
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 111 1e-21
4gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nippon... 111 1e-21
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 111 1e-21
6dbj|D25534.1|RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, com... 111 1e-21
7dbj|AK104123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 1e-21
8dbj|AK068986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 1e-21
9dbj|AK060994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 1e-21
10dbj|AK059438.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 1e-21
11dbj|AK058322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 1e-21
12gb|BT016300.1| Zea mays clone Contig133 mRNA sequence 101 1e-18
13gb|AY243803.1| Zea mays tonoplast water channel (TIP1-1) mRNA, c... 101 1e-18
14gb|AY104464.1| Zea mays PCO114899 mRNA sequence 101 1e-18
15gb|AF037061.1|AF037061 Zea mays tonoplast intrinsic protein (ZmT... 101 1e-18
16dbj|AK110727.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 2e-17
17ref|XM_470213.1| Oryza sativa (japonica cultivar-group), predic... 94 3e-16
18dbj|AB206104.1| Mimosa pudica tip1;1 mRNA for tonoplast intrinsi... 78 2e-11
19emb|AJ242805.1|SST242805 Sporobolus stapfianus mRNA for putative... 76 7e-11
20gb|AF521135.1| Kandelia candel tonoplast intrinsic protein (TIP)... 58 2e-05
21gb|DQ226889.1| Boechera divaricarpa isolate SLW-D-E07 mRNA sequence 48 0.016
22emb|X72581.1|ATGTIPMR A.thaliana mRNA for tonoplast intrinsic pr... 48 0.016
23gb|U92651.2|BOU92651 Brassica oleracea var. botrytis tonoplast i... 48 0.016
24gb|AY821911.1| Gossypium hirsutum putative tonoplast intrinsic p... 48 0.016
25emb|AJ251652.1|MTR251652 Medicago truncatula mRNA for aquaporin ... 46 0.064
26emb|AJ605573.1| Ricinus communis mRNA for aquaporin (Tip1-1 gene... 46 0.064
27gb|AY130971.1| Brassica oleracea var. botrytis tonoplast intrins... 44 0.25
28gb|U92652.2|BOU92652 Brassica oleracea var. botrytis tonoplast i... 44 0.25
29emb|AJ489613.1|CAR489613 Cicer arietinum partial mRNA for tonopl... 42 1.0
30ref|NM_129238.2| Arabidopsis thaliana GAMMA-TIP; water channel A... 40 4.0
31emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in... 40 4.0
32gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, comple... 40 4.0
33emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chr... 40 4.0
34emb|X63552.1|ATGTIPARA A.thaliana gene for tonoplast intrinsic p... 40 4.0
35gb|AY059134.1| Arabidopsis thaliana putative aquaporin (At2g3683... 40 4.0
36gb|AF370172.1| Arabidopsis thaliana putative tonoplast intrinsic... 40 4.0
37emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 i... 40 4.0
38gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, co... 40 4.0
39gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map ... 40 4.0
40gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, co... 40 4.0
41emb|BX819301.1|CNS0AA93 Arabidopsis thaliana Full-length cDNA Co... 40 4.0
42emb|BX819122.1|CNS0AA8S Arabidopsis thaliana Full-length cDNA Co... 40 4.0
43emb|BX819066.1|CNS0AA99 Arabidopsis thaliana Full-length cDNA Co... 40 4.0
44emb|BX818765.1|CNS0AA8G Arabidopsis thaliana Full-length cDNA Co... 40 4.0
45emb|BX819619.1|CNS0A8TV Arabidopsis thaliana Full-length cDNA Co... 40 4.0
46emb|BX819585.1|CNS0A8ZS Arabidopsis thaliana Full-length cDNA Co... 40 4.0
47emb|BX819242.1|CNS0A8YI Arabidopsis thaliana Full-length cDNA Co... 40 4.0
48emb|BX818836.1|CNS0A8V6 Arabidopsis thaliana Full-length cDNA Co... 40 4.0
49emb|BX818785.1|CNS0A8WQ Arabidopsis thaliana Full-length cDNA Co... 40 4.0
50emb|BX820166.1|CNS0A8IR Arabidopsis thaliana Full-length cDNA Co... 40 4.0
51gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplas... 40 4.0
52gb|AY087558.1| Arabidopsis thaliana clone 36633 mRNA, complete s... 40 4.0
53gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, co... 40 4.0
54gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, comp... 40 4.0
55gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, co... 40 4.0
56gb|AC116680.21| Mus musculus chromosome 12, clone RP23-476M16, c... 40 4.0
57gb|AF317103.1| Dumontia alaskana specimen-voucher GWS000917 (UNB... 40 4.0
58gb|AF317102.1| Dumontia alaskana specimen-voucher GWS000916 (UNB... 40 4.0
59gb|AF317101.1| Dumontia alaskana specimen-voucher G0221 (UNB) sm... 40 4.0
60gb|M84344.1|ATHGTIP Arabidopsis thaliana tonoplast intrinsic pro... 40 4.0
61emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chro... 40 4.0 
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein
          Length = 1020

 Score =  472 bits (238), Expect = e-130
 Identities = 257/264 (97%), Gaps = 1/264 (0%)
 Strand = Plus / Minus

                                                                        
Query: 39   gaattcacaggttttacacaagcaaattgacagggtcgatcgtcacaggtttcacagcac 98
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 gaattcacaggttttacacaagcaaattgacagggtcgatcgtcacaggtttcacagcac 961

                                                                        
Query: 99   cacaaactgatggaccgatcgaccctgggaatgggatggattcattcattcaaagcaaac 158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960  cacaaactgatggaccgatcgaccctgggaatgggatggattcattcattcaaagcaaac 901

                                                                        
Query: 159  ttaaacgactcatgactggaagcaaggggagacgcgatcgaccacacggacggacgggcg 218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900  ttaaacgactcatgactggaagcaaggggagacgcgatcgaccacacggacggacgggcg 841

                                                                        
Query: 219  ggcnnnnnnncaggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgc 278
            |||       ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840  ggc-ggggggcaggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgc 782

                                    
Query: 279  gggagatgaagagcagctcgtaga 302
            ||||||||||||||||||||||||
Sbjct: 781  gggagatgaagagcagctcgtaga 758
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>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA,
           complete cds
          Length = 1133

 Score =  113 bits (57), Expect = 3e-22
 Identities = 57/57 (100%)
 Strand = Plus / Minus

                                                                    
Query: 246 agtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtaga 302
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 agtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtaga 789



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 66/76 (86%), Gaps = 6/76 (7%)
 Strand = Plus / Minus

                                                                        
Query: 6    aactcaactgaacttgaaattactcgggcgga-----cgaattcacaggttttacacaag 60
            ||||||||| |||||||||||||||||||||      ||||||||||| ||||||| |||
Sbjct: 1101 aactcaactcaacttgaaattactcgggcgggacgggcgaattcacag-ttttacagaag 1043

                            
Query: 61   caaattgacagggtcg 76
            ||||||||||| ||||
Sbjct: 1042 caaattgacagtgtcg 1027



 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 151 aagcaaacttaaacgactcatg 172
           ||||||||||||||||||||||
Sbjct: 977 aagcaaacttaaacgactcatg 956
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  111 bits (56), Expect = 1e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                           
Query: 231     ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 290
               ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2544716 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 2544775

                           
Query: 291     gcagctcgtaga 302
               | | ||||||||
Sbjct: 2544776 ggacctcgtaga 2544787
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>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0067N01, from chromosome 3, complete sequence
          Length = 159636

 Score =  111 bits (56), Expect = 1e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                          
Query: 231    ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 290
              ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 125378 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 125319

                          
Query: 291    gcagctcgtaga 302
              | | ||||||||
Sbjct: 125318 ggacctcgtaga 125307
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  111 bits (56), Expect = 1e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                           
Query: 231     ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 290
               ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2544826 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 2544885

                           
Query: 291     gcagctcgtaga 302
               | | ||||||||
Sbjct: 2544886 ggacctcgtaga 2544897
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>dbj|D25534.1|RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, complete cds
          Length = 1080

 Score =  111 bits (56), Expect = 1e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                       
Query: 231 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 290
           ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 844 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 785

                       
Query: 291 gcagctcgtaga 302
           | | ||||||||
Sbjct: 784 ggacctcgtaga 773
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>dbj|AK104123.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C12, full
           insert sequence
          Length = 1034

 Score =  111 bits (56), Expect = 1e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                       
Query: 231 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 290
           ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 853 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 794

                       
Query: 291 gcagctcgtaga 302
           | | ||||||||
Sbjct: 793 ggacctcgtaga 782
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>dbj|AK068986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E16, full
           insert sequence
          Length = 1082

 Score =  111 bits (56), Expect = 1e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                       
Query: 231 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 290
           ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 855 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 796

                       
Query: 291 gcagctcgtaga 302
           | | ||||||||
Sbjct: 795 ggacctcgtaga 784
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>dbj|AK060994.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E02, full
           insert sequence
          Length = 870

 Score =  111 bits (56), Expect = 1e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                       
Query: 231 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 290
           ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 689 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 630

                       
Query: 291 gcagctcgtaga 302
           | | ||||||||
Sbjct: 629 ggacctcgtaga 618
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>dbj|AK059438.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G11, full
           insert sequence
          Length = 551

 Score =  111 bits (56), Expect = 1e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                       
Query: 231 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 290
           ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 379 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 320

                       
Query: 291 gcagctcgtaga 302
           | | ||||||||
Sbjct: 319 ggacctcgtaga 308
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>dbj|AK058322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B06, full
           insert sequence
          Length = 1055

 Score =  111 bits (56), Expect = 1e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                       
Query: 231 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 290
           ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 851 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 792

                       
Query: 291 gcagctcgtaga 302
           | | ||||||||
Sbjct: 791 ggacctcgtaga 780
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>gb|BT016300.1| Zea mays clone Contig133 mRNA sequence
          Length = 1112

 Score =  101 bits (51), Expect = 1e-18
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                      
Query: 244 ttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtaga 302
           |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 850 ttagtagtcggtggaggggagctgctcgtgggtgtgggagatgaagagcagctcgtaga 792
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>gb|AY243803.1| Zea mays tonoplast water channel (TIP1-1) mRNA, complete cds
          Length = 1039

 Score =  101 bits (51), Expect = 1e-18
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                      
Query: 244 ttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtaga 302
           |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 754 ttagtagtcggtggaggggagctgctcgtgggtgtgggagatgaagagcagctcgtaga 696
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>gb|AY104464.1| Zea mays PCO114899 mRNA sequence
          Length = 1167

 Score =  101 bits (51), Expect = 1e-18
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                      
Query: 244 ttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtaga 302
           |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 849 ttagtagtcggtggaggggagctgctcgtgggtgtgggagatgaagagcagctcgtaga 791
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>gb|AF037061.1|AF037061 Zea mays tonoplast intrinsic protein (ZmTIP1) mRNA, complete cds
          Length = 1097

 Score =  101 bits (51), Expect = 1e-18
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                      
Query: 244 ttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtaga 302
           |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 846 ttagtagtcggtggaggggagctgctcgtgggtgtgggagatgaagagcagctcgtaga 788
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>dbj|AK110727.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-E06, full
           insert sequence
          Length = 1024

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                    
Query: 231 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatga 287
           ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 167 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatga 223
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>ref|XM_470213.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 753

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                      
Query: 244 ttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtaga 302
           |||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||
Sbjct: 753 ttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaagaggacctcgtaga 695
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>dbj|AB206104.1| Mimosa pudica tip1;1 mRNA for tonoplast intrinsic protein 1;1,
           complete cds
          Length = 1067

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                          
Query: 244 ttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 290
           |||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 826 ttagtaatcggtggtggggagctgctcgtgggtgtgggagatgaaga 780
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>emb|AJ242805.1|SST242805 Sporobolus stapfianus mRNA for putative gamma tonoplast intrinsic
           protein (TIP)
          Length = 1146

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                     
Query: 242 gcttagtagtcggtggtggggagctgctcgtgggtgcgggag 283
           |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 837 gcttagtagtcggtggtggggagctgctcgtgggtgtgggag 796
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>gb|AF521135.1| Kandelia candel tonoplast intrinsic protein (TIP) mRNA, complete
           cds
          Length = 1099

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 242 gcttagtagtcggtggtggggagctgctcgtgggtgc 278
           ||||||||||| | |||||||||||||||||||||||
Sbjct: 859 gcttagtagtcagcggtggggagctgctcgtgggtgc 823
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>gb|DQ226889.1| Boechera divaricarpa isolate SLW-D-E07 mRNA sequence
          Length = 980

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 246 agtagtcggtggtggggagctgctcgtgggtg 277
           ||||||||||||| |||||||| |||||||||
Sbjct: 767 agtagtcggtggttgggagctgttcgtgggtg 736
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>emb|X72581.1|ATGTIPMR A.thaliana mRNA for tonoplast intrinsic protein gamma (gamma-TIP)
          Length = 933

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||||||||| ||||||||||||||
Sbjct: 787 agtagtcggtggttgggagctgctcgtg 760
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>gb|U92651.2|BOU92651 Brassica oleracea var. botrytis tonoplast intrinsic protein
           bobTIP26-1 mRNA, complete cds
          Length = 942

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 246 agtagtcggtggtggggagctgctcgtgggtg 277
           ||||||||| |||||||||||| |||||||||
Sbjct: 790 agtagtcggcggtggggagctgttcgtgggtg 759
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>gb|AY821911.1| Gossypium hirsutum putative tonoplast intrinsic protein mRNA,
           partial cds
          Length = 529

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 242 gcttagtagtcggtggtggggagctgctcgtgggtg 277
           ||||| || |||||||| ||||||||||||||||||
Sbjct: 417 gcttaataatcggtggttgggagctgctcgtgggtg 382
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>emb|AJ251652.1|MTR251652 Medicago truncatula mRNA for aquaporin (aqp1 gene)
          Length = 1120

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 245 tagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagag 291
           |||||||| || || ||||||||||||||||||| |  |||||||||
Sbjct: 837 tagtagtcagtagttgggagctgctcgtgggtgctgttgatgaagag 791
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>emb|AJ605573.1| Ricinus communis mRNA for aquaporin (Tip1-1 gene), clone pT4L
          Length = 1057

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 244 ttagtagtcggtggtggggagctgctcgtgggtgc 278
           ||||||||| ||||| ||||||||||| |||||||
Sbjct: 804 ttagtagtcagtggtagggagctgctcatgggtgc 770
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>gb|AY130971.1| Brassica oleracea var. botrytis tonoplast intrinsic protein
            bobTIP26-2 gene, complete cds
          Length = 1442

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 246  agtagtcggtggtggggagctg 267
            ||||||||||||||||||||||
Sbjct: 1247 agtagtcggtggtggggagctg 1226
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>gb|U92652.2|BOU92652 Brassica oleracea var. botrytis tonoplast intrinsic protein
           bobTIP26-2 mRNA, partial cds
          Length = 599

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 246 agtagtcggtggtggggagctg 267
           ||||||||||||||||||||||
Sbjct: 526 agtagtcggtggtggggagctg 505
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>emb|AJ489613.1|CAR489613 Cicer arietinum partial mRNA for tonoplast intrinsic protein (tip
           gene)
          Length = 716

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 245 tagtagtcggtggtggggagctgctcgtgggtg 277
           |||||||| ||||| ||||| ||||||||||||
Sbjct: 428 tagtagtcagtggtagggagttgctcgtgggtg 396
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>ref|NM_129238.2| Arabidopsis thaliana GAMMA-TIP; water channel AT2G36830 (GAMMA-TIP)
           mRNA, complete cds
          Length = 1058

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 818 agtagtctgtggttgggagctgctcgtg 791
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>emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in linkage group 9, complete
              sequence
          Length = 153947

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    attcattcattcaaagcaaa 157
              ||||||||||||||||||||
Sbjct: 143356 attcattcattcaaagcaaa 143337
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>gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, complete sequence
          Length = 154859

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   gatggattcattcattcaaa 152
             ||||||||||||||||||||
Sbjct: 68036 gatggattcattcattcaaa 68017
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>emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chromosome 1p32.1-33
             Contains 3' end of the DAB1 gene for disabled homolog 1
             (Drosophila), a novel gene and the 5' end of a novel gene,
             complete sequence
          Length = 60856

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   gatggattcattcattcaaa 152
             ||||||||||||||||||||
Sbjct: 53885 gatggattcattcattcaaa 53904
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>emb|X63552.1|ATGTIPARA A.thaliana gene for tonoplast intrinsic protein gamma-TIP(Ara)
          Length = 1398

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 246  agtagtcggtggtggggagctgctcgtg 273
            ||||||| ||||| ||||||||||||||
Sbjct: 1203 agtagtctgtggttgggagctgctcgtg 1176
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>gb|AY059134.1| Arabidopsis thaliana putative aquaporin (At2g36830) mRNA, complete
           cds
          Length = 787

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 754 agtagtctgtggttgggagctgctcgtg 727
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>gb|AF370172.1| Arabidopsis thaliana putative tonoplast intrinsic protein gamma,
           aquaporin (At2g36830) mRNA, complete cds
          Length = 1030

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 812 agtagtctgtggttgggagctgctcgtg 785
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>emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 in linkage group 17,
             complete sequence
          Length = 141987

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gggatggattcattcattca 150
             ||||||||||||||||||||
Sbjct: 10001 gggatggattcattcattca 10020
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>gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, complete sequence
          Length = 177355

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 128   aatgggatggattcattcattcaa 151
             |||||||| |||||||||||||||
Sbjct: 47407 aatgggattgattcattcattcaa 47384
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>gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete
            sequence
          Length = 134151

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 246  agtagtcggtggtggggagctgctcgtg 273
            ||||||| ||||| ||||||||||||||
Sbjct: 7513 agtagtctgtggttgggagctgctcgtg 7486
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>gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, complete sequence
          Length = 171987

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 128   aatgggatggattcattcattcaa 151
             |||||||| |||||||||||||||
Sbjct: 31404 aatgggattgattcattcattcaa 31381
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>emb|BX819301.1|CNS0AA93 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB66ZE04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 996

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 793 agtagtctgtggttgggagctgctcgtg 766
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>emb|BX819122.1|CNS0AA8S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB49ZC08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 929

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 797 agtagtctgtggttgggagctgctcgtg 770
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>emb|BX819066.1|CNS0AA99 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB42ZA01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1009

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 783 agtagtctgtggttgggagctgctcgtg 756
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>emb|BX818765.1|CNS0AA8G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB10ZD11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 950

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 798 agtagtctgtggttgggagctgctcgtg 771
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>emb|BX819619.1|CNS0A8TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB95ZA10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 885

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 799 agtagtctgtggttgggagctgctcgtg 772
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>emb|BX819585.1|CNS0A8ZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB91ZD10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 975

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 799 agtagtctgtggttgggagctgctcgtg 772
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>emb|BX819242.1|CNS0A8YI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB5ZD01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 904

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 797 agtagtctgtggttgggagctgctcgtg 770
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>emb|BX818836.1|CNS0A8V6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB18ZB03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 995

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 798 agtagtctgtggttgggagctgctcgtg 771
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>emb|BX818785.1|CNS0A8WQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB13ZC03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 973

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 797 agtagtctgtggttgggagctgctcgtg 770
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>emb|BX820166.1|CNS0A8IR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS84ZH08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 961

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 789 agtagtctgtggttgggagctgctcgtg 762
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>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome
          Length = 164921

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    aactgaacttgaaattactc 30
             ||||||||||||||||||||
Sbjct: 98129 aactgaacttgaaattactc 98148
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>gb|AY087558.1| Arabidopsis thaliana clone 36633 mRNA, complete sequence
          Length = 1042

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 246 agtagtcggtggtggggagctgctcgtg 273
           ||||||| ||||| ||||||||||||||
Sbjct: 818 agtagtctgtggttgggagctgctcgtg 791
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>gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, complete sequence
          Length = 180708

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 128    aatgggatggattcattcattcaa 151
              |||||||| |||||||||||||||
Sbjct: 146597 aatgggattgattcattcattcaa 146620
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>gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, complete sequence
          Length = 132353

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 128   aatgggatggattcattcattcaa 151
             |||||||| |||||||||||||||
Sbjct: 74998 aatgggattgattcattcattcaa 74975
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>gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, complete sequence
          Length = 194754

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 128    aatgggatggattcattcattcaa 151
              |||||||| |||||||||||||||
Sbjct: 116188 aatgggattgattcattcattcaa 116211
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>gb|AC116680.21| Mus musculus chromosome 12, clone RP23-476M16, complete sequence
          Length = 215303

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      aactcaactgaacttgaaat 25
              ||||||||||||||||||||
Sbjct: 198046 aactcaactgaacttgaaat 198065
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>gb|AF317103.1| Dumontia alaskana specimen-voucher GWS000917 (UNB) small subunit
           ribosomal RNA gene, partial sequence; internal
           transcribed spacer 1, 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           large subunit ribosomal RNA gene, partial sequence
          Length = 892

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 258 tggggagctgctcgtgggtgcggg 281
           |||||||||||| |||||||||||
Sbjct: 375 tggggagctgctggtgggtgcggg 398
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>gb|AF317102.1| Dumontia alaskana specimen-voucher GWS000916 (UNB) small subunit
           ribosomal RNA gene, partial sequence; internal
           transcribed spacer 1, 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           large subunit ribosomal RNA gene, partial sequence
          Length = 892

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 258 tggggagctgctcgtgggtgcggg 281
           |||||||||||| |||||||||||
Sbjct: 375 tggggagctgctggtgggtgcggg 398
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>gb|AF317101.1| Dumontia alaskana specimen-voucher G0221 (UNB) small subunit
            ribosomal RNA gene, internal transcribed spacer 1, 5.8S
            ribosomal RNA gene and internal transcribed spacer 2,
            complete sequence; and large subunit ribosomal RNA gene,
            partial sequence
          Length = 2663

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 258  tggggagctgctcgtgggtgcggg 281
            |||||||||||| |||||||||||
Sbjct: 2143 tggggagctgctggtgggtgcggg 2166
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>gb|M84344.1|ATHGTIP Arabidopsis thaliana tonoplast intrinsic protein (gamma-TIP) gene,
            complete cds
          Length = 1398

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 246  agtagtcggtggtggggagctgctcgtg 273
            ||||||| ||||| ||||||||||||||
Sbjct: 1203 agtagtctgtggttgggagctgctcgtg 1176
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>emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chromosome 2, complete
             sequence
          Length = 100090

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   attcattcattcaaagcaaa 157
             ||||||||||||||||||||
Sbjct: 53765 attcattcattcaaagcaaa 53784


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,527,009
Number of Sequences: 3902068
Number of extensions: 2527009
Number of successful extensions: 54529
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54422
Number of HSP's gapped (non-prelim): 107
length of query: 302
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 280
effective length of database: 17,147,199,772
effective search space: 4801215936160
effective search space used: 4801215936160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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