ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet62a05 |
|---|---|
| Clone Library Name | barley_pub |
>COMT1_MAIZE (Q06509) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 364 Score = 45.8 bits (107), Expect = 3e-05 Identities = 21/29 (72%), Positives = 23/29 (79%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 F LAKGAGF+ K TYIYANA+AIEF K Sbjct: 336 FRELAKGAGFSGFKATYIYANAWAIEFIK 364
>COMT1_SACOF (O82054) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 362 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/29 (72%), Positives = 23/29 (79%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 F LAKGAGF+ K TYIYANA+AIEF K Sbjct: 334 FHDLAKGAGFSGFKATYIYANAWAIEFIK 362
>OMT1_ORYSA (Q6ZD89) Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (Flavonol| 3-O-methyltransferase 1) Length = 368 Score = 44.3 bits (103), Expect = 7e-05 Identities = 20/29 (68%), Positives = 22/29 (75%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 F LA+ AGF K TYIYANA+AIEFTK Sbjct: 340 FRELARAAGFTGFKATYIYANAWAIEFTK 368
>COMT1_ROSCH (Q8GU25) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 365 Score = 30.8 bits (68), Expect = 0.84 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 FEALAKG+GF ++ N + IEF K Sbjct: 335 FEALAKGSGFQGIRVACNAFNTYVIEFLK 363
>COMT1_PRUDU (Q43609) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 365 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 F+ALAKGAGF N + IEF K Sbjct: 335 FQALAKGAGFQGFNVACSAFNTYVIEFLK 363
>COMT1_ZINEL (Q43239) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 354 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 FEALAKGAGF N + +EF K Sbjct: 326 FEALAKGAGFKGFNKAACALNTWVMEFCK 354
>COMT1_CLABR (O23760) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 370 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 FEALA GAGF K N + +EF K Sbjct: 340 FEALAIGAGFKGFKVACCAFNTYVMEFLK 368
>EPL1_CANAL (Q5AAG1) Enhancer of polycomb-like protein 1| Length = 753 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/64 (23%), Positives = 29/64 (45%) Frame = +3 Query: 39 YNQQRTEIMSLHHMQPLREALLMQYISDSSTTQPVEFRMIHDKIRETEENQAKVHMQVDA 218 Y Q+ + + ++P + L S SST QP + + + + EE + + ++A Sbjct: 38 YKQRDLPTLDSNELEPSQVHHLNSNASSSSTQQPRDLHAVETGVDKNEEEEVHLQQVINA 97 Query: 219 AAPA 230 A A Sbjct: 98 AQKA 101
>L_HENDV (O89344) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2244 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%) Frame = -1 Query: 200 YFGLVFLCFPDFVMNHS-EFYWLC-RRTIRNVL 108 YFGLV +CFP + S E Y +C ++TI+ ++ Sbjct: 1995 YFGLVLVCFPVYSNPESTEVYLICLQKTIKTII 2027
>HRPN_PECCC (Q47279) Harpin hrpN (Harpin-Ecc) (Fragment)| Length = 356 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +2 Query: 164 QNQGNRGKPSQSTYAG*RSSASEQEQD 244 Q+ N G PSQS + G RS+ +EQ D Sbjct: 27 QSSQNGGSPSQSAFGGQRSNIAEQLSD 53
>L_NIPAV (Q997F0) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2244 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 2/33 (6%) Frame = -1 Query: 200 YFGLVFLCFPDFV-MNHSEFYWLC-RRTIRNVL 108 YFGLV +CFP + + +E Y LC ++T++ ++ Sbjct: 1995 YFGLVLVCFPVYSNPDSTEVYLLCLQKTVKTIV 2027
>LIPB_BRUSU (Q8FW72) Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl-carrier| protein]-protein-N-lipoyltransferase) (Lipoate-protein ligase B) Length = 267 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/61 (27%), Positives = 32/61 (52%) Frame = +3 Query: 66 SLHHMQPLREALLMQYISDSSTTQPVEFRMIHDKIRETEENQAKVHMQVDAAAPASKSKM 245 S QP R+AL +++ + PVE+ +I + + + EE A + +V A + S++ Sbjct: 24 STETQQPKRDALYARFLPQEADAPPVEW-LIAEGLTDYEEALAFMEARVQAIREGTASEL 82 Query: 246 V 248 V Sbjct: 83 V 83
>Y48K_ELV (P35929) Hypothetical 48 kDa protein| Length = 440 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/57 (33%), Positives = 23/57 (40%) Frame = -3 Query: 333 SHEDHLHLRQRICHRVHQVDPWQPPTDLRPSCSCSLALLRQPAYVLWLGFPLFP*FC 163 SH HLH R+ H++ Q P CS L +P Y G P P FC Sbjct: 384 SHSGHLHHNDRVEHQLQQ----------GPLLQCSQDSLAEPTY--RPGTPSLPNFC 428
>OMT2_CHRAE (Q42653) Quercetin 3-O-methyltransferase 2 (EC 2.1.1.76) (Flavonol| 3-O-methyltransferase 2) Length = 343 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 FEALAK AGF + N + IEF+K Sbjct: 311 FEALAKAAGFQGFQVFCNAFNTYIIEFSK 339
>OMT1_CHRAE (P59049) Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (Flavonol| 3-O-methyltransferase 1) Length = 343 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 FEALAK AGF + N + IEF+K Sbjct: 311 FEALAKAAGFQGFQVFCNAFNTYIIEFSK 339
>COMT1_POPTM (Q00763) Caffeic acid 3-O-methyltransferase 1 (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase 1) (COMT-1) (CAOMT-1) Length = 365 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 FE LAKGAGF + N IEF K Sbjct: 335 FEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363
>T23O_CAEEL (Q09474) Putative tryptophan 2,3-dioxygenase (EC 1.13.11.11)| (Tryptophan pyrrolase) (Tryptophanase) (Tryptophan oxygenase) (Tryptamin 2,3-dioxygenase) (TRPO) Length = 403 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/51 (27%), Positives = 28/51 (54%) Frame = +3 Query: 57 EIMSLHHMQPLREALLMQYISDSSTTQPVEFRMIHDKIRETEENQAKVHMQ 209 +I L M PL +Y++ +S Q ++FR++ +K+ +E + K + Q Sbjct: 124 QITLLDTMSPLDFVDFRKYLTPASGFQSLQFRVLENKLGVRQERRIKYNAQ 174
>FAD11_MYCTU (Q10776) Putative fatty-acid--CoA ligase fadD11 (EC 6.2.1.-)| (Acyl-CoA synthetase) Length = 571 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = -3 Query: 351 QGRRLRSHEDHLHLRQRICHRVHQVDPWQPPTDL 250 QG LR+ RQR HR H++ W+ P L Sbjct: 72 QGGHLRATVRRSRSRQRCAHRTHRLRRWRAPGTL 105
>COMT1_MEDSA (P28002) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 365 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 FE LAKGAGF K N + +EF K Sbjct: 335 FEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363
>V70K_OYMV (P20130) 66 kDa protein| Length = 597 Score = 27.7 bits (60), Expect = 7.2 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = -3 Query: 357 PGQGRRLRSHEDHLHLRQRICHRVHQ--VDPWQPPTDLRPSCSCSLA 223 P R RS HLHL + +R H D QP +D RP S L+ Sbjct: 119 PSHRGRFRSIPLHLHLSSEVRNRFHARCPDVLQPLSDTRPLHSVPLS 165
>FLID_THEMA (Q9X0K7) Flagellar hook-associated protein 2 (HAP2) (Filament cap| protein) (Flagellar cap protein) Length = 608 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = +3 Query: 126 STTQPVEFRMIHDKIRETEENQAKVHMQVDAAAPASKSKMVSDRWAVAMDLLGE 287 S T VE+ + I V ++VD A K K D+W MD L E Sbjct: 368 SDTNDVEYNGVTFHISGMTSETITVDVRVDTDAIVEKIKEFVDKWNETMDYLNE 421
>COMT1_CAPAN (Q9FQY8) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 359 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 FEALAKGAGF + + +EF K Sbjct: 331 FEALAKGAGFTGFRRACCAYQTWVMEFHK 359
>COMT2_POPTM (Q41086) Caffeic acid 3-O-methyltransferase 2 (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase 2) (COMT-2) (CAOMT-2) Length = 364 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 FE+LA+GAGF + N IEF K Sbjct: 334 FESLARGAGFKGFEVMCCAFNTHVIEFRK 362
>SYTL2_HUMAN (Q9HCH5) Synaptotagmin-like protein 2 (Exophilin-4)| Length = 895 Score = 27.3 bits (59), Expect = 9.3 Identities = 20/70 (28%), Positives = 31/70 (44%) Frame = +3 Query: 156 IHDKIRETEENQAKVHMQVDAAAPASKSKMVSDRWAVAMDLLGELDGKCVGVDVGGLHGC 335 IH++I E E H D ++P S + R++ D L + G G +VG Sbjct: 291 IHERISEKE------HSLEDNSSPNSLEPLKHVRFSAVKDELPQSPGLIHGREVGEFSVL 344 Query: 336 EAGALGQGLE 365 E+ L G+E Sbjct: 345 ESDRLKNGME 354
>MEOX1_HUMAN (P50221) Homeobox protein MOX-1 (Mesenchyme homeobox 1)| Length = 254 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +2 Query: 137 ASRIQNDS*QNQGNRGKPSQSTYAG*RSSASEQEQ 241 +SR + +S NQ NRGKP S+ A +A +EQ Sbjct: 148 SSRRRKESSDNQENRGKPEGSSKARKERTAFTKEQ 182
>COMT1_COFCA (Q8LL87) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 350 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 FEALAKGAGF + N + +E K Sbjct: 322 FEALAKGAGFKEFRKVCSAVNTWIMELCK 350
>KIF4A_HUMAN (O95239) Chromosome-associated kinesin KIF4A (Chromokinesin)| Length = 1232 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = +3 Query: 45 QQRTEIMSLHHMQPLREALLMQYISDSSTTQPVEFRMIHDKIRETE 182 Q E++ L+ L+EAL + + S QP++++ D I+E E Sbjct: 521 QMSKELVELNKALALKEALARKMTQNDSQLQPIQYQ-YQDNIKELE 565
>COMT3_POPKI (Q43047) Caffeic acid 3-O-methyltransferase 3 (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase 1) (COMT-3) (CAOMT-3) Length = 364 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = -1 Query: 365 FEALAKGAGFAAMKTTYIYANAFAIEFTK 279 FE LA+GAGF + N IEF K Sbjct: 334 FEGLARGAGFKGFEVMCCAFNTHVIEFRK 362 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,238,392 Number of Sequences: 219361 Number of extensions: 882324 Number of successful extensions: 2589 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2547 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2588 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
