ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet61h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB009309.2| Hordeum vulgare HvPIP1;5 mRNA, complete cds 161 8e-37
2emb|AL670462.8| Mouse DNA sequence from clone RP23-225F2 on chro... 42 0.54
3emb|CR352263.9| Zebrafish DNA sequence from clone CH211-120M16 i... 40 2.1
4gb|AF391857.1|AF391857 Equus caballus clone 35B/2 genomic sequence 40 2.1
5emb|BX004760.10| Zebrafish DNA sequence from clone CH211-222O4 i... 40 2.1
6gb|AF386070.1| Propionibacterium granulosum strain ATCC 25564 16... 40 2.1
7emb|AL824707.7| Mouse DNA sequence from clone RP23-95O1 on chrom... 40 2.1
8ref|XM_641490.1| Dictyostelium discoideum aspartate-tRNA ligase ... 38 8.4
9gb|AC120004.14| Mus musculus chromosome 5, clone RP24-150N15, co... 38 8.4
10emb|AL954201.1| Pan troglodytes chromosome 22 clone PTB-118B22 m... 38 8.4
11emb|AL954200.2| Pan troglodytes chromosome 22 clone PTB-419O23 m... 38 8.4
12ref|XM_448931.1| Candida glabrata CBS138, CAGL0L03630g partial mRNA 38 8.4
13gb|AC122466.2| Mus musculus BAC clone RP24-304N8 from chromosome... 38 8.4
14gb|AC073520.6| Homo sapiens BAC clone RP11-792H4 from 7, complet... 38 8.4
15emb|AL663105.4| Human DNA sequence from clone RP4-743D20 on chro... 38 8.4
16gb|AF158101.6| Enterobacteria phage T4, complete genome 38 8.4
17emb|AL359074.12| Human DNA sequence from clone RP11-137L10 on ch... 38 8.4
18emb|AL135960.1| Human DNA sequence from clone RP1-18D14 on chrom... 38 8.4
19emb|CR380958.1| Candida glabrata strain CBS138 chromosome L comp... 38 8.4
20emb|AL606723.7| Zebrafish DNA sequence from clone BUSM1-230D15 i... 38 8.4
21gb|AC010561.7| Drosophila melanogaster 3L BAC RP98-21A2 (Roswell... 38 8.4
22gb|AC073389.10| Homo sapiens chromosome 10 clone RP11-464F9, com... 38 8.4
23gb|AC091908.3| Homo sapiens chromosome 5 clone RP11-202F17, comp... 38 8.4
24gb|AC091984.3| Homo sapiens chromosome 5 clone RP11-569B13, comp... 38 8.4
25gb|AC107487.1| Drosophila melanogaster 3L BAC RP98-10D20 (Roswel... 38 8.4
26gb|AC091628.2| Homo sapiens chromosome 17 map 17q21.1, complete ... 38 8.4
27gb|AF349655.1|F349640S16 Homo sapiens SIL protein gene, exon 16 38 8.4
28gb|AC004139.2| Homo sapiens chromosome 17, clone RP5-843B9, comp... 38 8.4
29gb|AC147213.3| Pan troglodytes BAC clone RP43-127I22 from chromo... 38 8.4
30gb|AC024154.2|AC024154 Homo sapiens chromosome 3 clone RP11-487J... 38 8.4
31gb|AC025920.12|AC025920 Homo sapiens chromosome N/A clone RP11-2... 38 8.4
32emb|BX088598.7| Zebrafish DNA sequence from clone CH211-197J3 in... 38 8.4
33emb|BX004783.13| Zebrafish DNA sequence from clone DKEY-14E1 in ... 38 8.4
34emb|AJ131016.1|HSA131016 Homo sapiens SCL gene locus 38 8.4
35gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P... 38 8.4
36gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10... 38 8.4
37dbj|AP001712.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 8.4
38emb|AL928940.12| Mouse DNA sequence from clone RP23-94J17 on chr... 38 8.4
39gb|AC002366.1|AC002366 Human Xp22 BAC CT-285I15 (from CalTech/Re... 38 8.4
40emb|AL731828.22| Mouse DNA sequence from clone RP23-50L5 on chro... 38 8.4
41dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone... 38 8.4
42emb|AL611934.18| Mouse DNA sequence from clone RP23-472A8 on chr... 38 8.4
43gb|AC024162.5| Homo sapiens chromosome 3 clone RP11-320K1 map 3p... 38 8.4
44gb|M19728.1|PT4DTOPII Bacteriophage T4 gene 60 encoding DNA topo... 38 8.4
45dbj|AP000466.1| Homo sapiens genomic DNA, chromosome 21q22.1, cl... 38 8.4 
>dbj|AB009309.2| Hordeum vulgare HvPIP1;5 mRNA, complete cds
          Length = 1147

 Score =  161 bits (81), Expect = 8e-37
 Identities = 88/89 (98%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                        
Query: 83   aatggaaactacagcaaccataaattataacttaaatcttccacaacaagaacacacaca 142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1147 aatggaaactacagcaaccataaattataacttaaatcttccacaacaagaacac-caca 1089

                                         
Query: 143  actgtcacactgaattacacacacgagtc 171
            |||||||||||||||||||||||||||||
Sbjct: 1088 actgtcacactgaattacacacacgagtc 1060
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>emb|AL670462.8| Mouse DNA sequence from clone RP23-225F2 on chromosome X, complete
             sequence
          Length = 199841

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 90    actacagcaaccataaattat 110
             |||||||||||||||||||||
Sbjct: 19804 actacagcaaccataaattat 19784
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>emb|CR352263.9| Zebrafish DNA sequence from clone CH211-120M16 in linkage group 3,
              complete sequence
          Length = 165166

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    ccacaacaagaacacacaca 142
              ||||||||||||||||||||
Sbjct: 110828 ccacaacaagaacacacaca 110809
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>gb|AF391857.1|AF391857 Equus caballus clone 35B/2 genomic sequence
          Length = 2840

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  acaacaagaacacacacaac 144
            ||||||||||||||||||||
Sbjct: 1143 acaacaagaacacacacaac 1124
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>emb|BX004760.10| Zebrafish DNA sequence from clone CH211-222O4 in linkage group 3,
              complete sequence
          Length = 190220

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    ccacaacaagaacacacaca 142
              ||||||||||||||||||||
Sbjct: 134602 ccacaacaagaacacacaca 134583
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>gb|AF386070.1| Propionibacterium granulosum strain ATCC 25564 16S-23S ribosomal
           RNA intergenic spacer and 23S ribosomal RNA gene,
           partial sequence
          Length = 232

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 121 ttccacaacaagaacacaca 140
           ||||||||||||||||||||
Sbjct: 37  ttccacaacaagaacacaca 18
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>emb|AL824707.7| Mouse DNA sequence from clone RP23-95O1 on chromosome 4, complete
              sequence
          Length = 225002

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     cagcaaccataaattataac 113
              ||||||||||||||||||||
Sbjct: 142848 cagcaaccataaattataac 142867
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>ref|XM_641490.1| Dictyostelium discoideum aspartate-tRNA ligase (DDB0231311),
           partial mRNA
          Length = 2079

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 97  caaccataaattataactt 115
           |||||||||||||||||||
Sbjct: 290 caaccataaattataactt 272
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>gb|AC120004.14| Mus musculus chromosome 5, clone RP24-150N15, complete sequence
          Length = 199229

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 134    acacacacaactgtcacac 152
              |||||||||||||||||||
Sbjct: 105381 acacacacaactgtcacac 105363
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>emb|AL954201.1| Pan troglodytes chromosome 22 clone PTB-118B22 map q21.1, complete
            sequence
          Length = 181254

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 125  acaacaagaacacacacaa 143
            |||||||||||||||||||
Sbjct: 8274 acaacaagaacacacacaa 8256
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>emb|AL954200.2| Pan troglodytes chromosome 22 clone PTB-419O23 map q21.1, complete
             sequence
          Length = 139459

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 125   acaacaagaacacacacaa 143
             |||||||||||||||||||
Sbjct: 70828 acaacaagaacacacacaa 70810
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>ref|XM_448931.1| Candida glabrata CBS138, CAGL0L03630g partial mRNA
          Length = 2037

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 116  aaatcttccacaacaagaa 134
            |||||||||||||||||||
Sbjct: 1661 aaatcttccacaacaagaa 1679
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>gb|AC122466.2| Mus musculus BAC clone RP24-304N8 from chromosome 5, complete sequence
          Length = 196687

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 134    acacacacaactgtcacac 152
              |||||||||||||||||||
Sbjct: 101064 acacacacaactgtcacac 101046
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>gb|AC073520.6| Homo sapiens BAC clone RP11-792H4 from 7, complete sequence
          Length = 85219

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 123   ccacaacaagaacacacacaact 145
             |||||| ||||||||||||||||
Sbjct: 53281 ccacaaaaagaacacacacaact 53259
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>emb|AL663105.4| Human DNA sequence from clone RP4-743D20 on chromosome 1 Contains a
             novel gene and a CpG island, complete sequence
          Length = 157062

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 121   ttccacaacaagaacacacacaa 143
             ||||||||||||||| |||||||
Sbjct: 79209 ttccacaacaagaactcacacaa 79187
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>gb|AF158101.6| Enterobacteria phage T4, complete genome
          Length = 168903

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 72   gggagttgctaaatggaaa 90
            |||||||||||||||||||
Sbjct: 3109 gggagttgctaaatggaaa 3091
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>emb|AL359074.12| Human DNA sequence from clone RP11-137L10 on chromosome 10 Contains the
             5' end of the PPP3CB gene for protein phosphatase 3
             (formerly 2B) catalytic subunit beta isoform (calcineurin
             A beta), two novel genes (FLJ37318), the 3' end of a novel
             gene, a ribosomal protein S26 (RPS26) pseudogene and a CpG
             island, complete sequence
          Length = 152161

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 125   acaacaagaacacacacaa 143
             |||||||||||||||||||
Sbjct: 82804 acaacaagaacacacacaa 82786
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>emb|AL135960.1| Human DNA sequence from clone RP1-18D14 on chromosome 1 Contains the 3'
             end of the gene for cytochrome P450 4Z1 (CYP4Z1), the gene
             for a novel protein similar to cytochrome P450 family 4
             subfamily A polypeptide 11 (CYP4A11) (LOC284541), a NADH
             dehydrogenase 1 mitochondrial pseudogene, three novel
             genes, the gene for membrane-associated protein 17
             (MAP17), the TAL1 gene for T-cell acute lymphocytic
             leukemia 1, the 3' end of the SIL gene for TAL1 (SCL)
             interrupting locus and a CpG island, complete sequence
          Length = 193358

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 101   cataaattataacttaaat 119
             |||||||||||||||||||
Sbjct: 15198 cataaattataacttaaat 15216
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>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 116    aaatcttccacaacaagaa 134
              |||||||||||||||||||
Sbjct: 417344 aaatcttccacaacaagaa 417362
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>emb|AL606723.7| Zebrafish DNA sequence from clone BUSM1-230D15 in linkage group 6
             Contains a novel gene similar to TRIO (triple functional
             domain protein, PTPRF interacting) and a CpG island,
             complete sequence
          Length = 63674

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 99    accataaattataacttaa 117
             |||||||||||||||||||
Sbjct: 33524 accataaattataacttaa 33542
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>gb|AC010561.7| Drosophila melanogaster 3L BAC RP98-21A2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 171451

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 123   ccacaacaagaacacacac 141
             |||||||||||||||||||
Sbjct: 28826 ccacaacaagaacacacac 28844
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>gb|AC073389.10| Homo sapiens chromosome 10 clone RP11-464F9, complete sequence
          Length = 190681

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 125    acaacaagaacacacacaa 143
              |||||||||||||||||||
Sbjct: 137982 acaacaagaacacacacaa 138000
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>gb|AC091908.3| Homo sapiens chromosome 5 clone RP11-202F17, complete sequence
          Length = 37914

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 99    accataaattataacttaa 117
             |||||||||||||||||||
Sbjct: 31870 accataaattataacttaa 31888
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>gb|AC091984.3| Homo sapiens chromosome 5 clone RP11-569B13, complete sequence
          Length = 207040

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 99  accataaattataacttaa 117
           |||||||||||||||||||
Sbjct: 705 accataaattataacttaa 723
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>gb|AC107487.1| Drosophila melanogaster 3L BAC RP98-10D20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 170900

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 123    ccacaacaagaacacacac 141
              |||||||||||||||||||
Sbjct: 124806 ccacaacaagaacacacac 124824
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>gb|AC091628.2| Homo sapiens chromosome 17 map 17q21.1, complete sequence
          Length = 201397

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 125    acaacaagaacacacacaa 143
              |||||||||||||||||||
Sbjct: 167324 acaacaagaacacacacaa 167342
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>gb|AF349655.1|F349640S16 Homo sapiens SIL protein gene, exon 16
          Length = 730

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 101 cataaattataacttaaat 119
           |||||||||||||||||||
Sbjct: 621 cataaattataacttaaat 639
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>gb|AC004139.2| Homo sapiens chromosome 17, clone RP5-843B9, complete sequence
          Length = 126231

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 125   acaacaagaacacacacaa 143
             |||||||||||||||||||
Sbjct: 78855 acaacaagaacacacacaa 78837
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>gb|AC147213.3| Pan troglodytes BAC clone RP43-127I22 from chromosome 7, complete
             sequence
          Length = 205208

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 123   ccacaacaagaacacacacaact 145
             |||||| ||||||||||||||||
Sbjct: 16748 ccacaaaaagaacacacacaact 16770
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>gb|AC024154.2|AC024154 Homo sapiens chromosome 3 clone RP11-487J12 map 3p, complete sequence
          Length = 204797

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 26     gagcaatctcaacagtactcatg 48
              ||||||| |||||||||||||||
Sbjct: 187502 gagcaatgtcaacagtactcatg 187480
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>gb|AC025920.12|AC025920 Homo sapiens chromosome N/A clone RP11-277D17, complete sequence
          Length = 161489

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 26    gagcaatctcaacagtactcatg 48
             ||||||| |||||||||||||||
Sbjct: 48461 gagcaatgtcaacagtactcatg 48439
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>emb|BX088598.7| Zebrafish DNA sequence from clone CH211-197J3 in linkage group 5,
             complete sequence
          Length = 214842

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 127   aacaagaacacacacaactgtca 149
             |||||||||| ||||||||||||
Sbjct: 19778 aacaagaacaaacacaactgtca 19756
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>emb|BX004783.13| Zebrafish DNA sequence from clone DKEY-14E1 in linkage group 6, complete
              sequence
          Length = 204385

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 99     accataaattataacttaa 117
              |||||||||||||||||||
Sbjct: 170385 accataaattataacttaa 170403
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>emb|AJ131016.1|HSA131016 Homo sapiens SCL gene locus
          Length = 193471

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 101   cataaattataacttaaat 119
             |||||||||||||||||||
Sbjct: 15198 cataaattataacttaaat 15216
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>gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P11 genomic sequence, complete
             sequence
          Length = 85372

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 101   cataaattataacttaaat 119
             |||||||||||||||||||
Sbjct: 43801 cataaattataacttaaat 43819
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>gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10 of 83 of the complete
              sequence
          Length = 304419

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 123    ccacaacaagaacacacac 141
              |||||||||||||||||||
Sbjct: 173425 ccacaacaagaacacacac 173443
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>dbj|AP001712.1| Homo sapiens genomic DNA, chromosome 21q, section 56/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 125    acaacaagaacacacacaa 143
              |||||||||||||||||||
Sbjct: 147815 acaacaagaacacacacaa 147797
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>emb|AL928940.12| Mouse DNA sequence from clone RP23-94J17 on chromosome 2, complete
              sequence
          Length = 115994

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 120    cttccacaacaagaacacacaca 142
              ||||||||||||| |||||||||
Sbjct: 102085 cttccacaacaagcacacacaca 102107
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>gb|AC002366.1|AC002366 Human Xp22 BAC CT-285I15 (from CalTech/Research Genetics) , PAC
              RPCI1-27C22 (from Roswell Park Cancer Center), and Cosmid
              U35B5 (from Lawrence Livermore), complete sequence
          Length = 259202

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 137    cacacaactgtcacactga 155
              |||||||||||||||||||
Sbjct: 236411 cacacaactgtcacactga 236393
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>emb|AL731828.22| Mouse DNA sequence from clone RP23-50L5 on chromosome X, complete
             sequence
          Length = 228327

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 104   aaattataacttaaatctt 122
             |||||||||||||||||||
Sbjct: 25450 aaattataacttaaatctt 25468
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>dbj|AP006864.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT18I21, TM1144,
             complete sequence
          Length = 135217

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 34    tcaacagtactcatgtcaa 52
             |||||||||||||||||||
Sbjct: 86761 tcaacagtactcatgtcaa 86743
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>emb|AL611934.18| Mouse DNA sequence from clone RP23-472A8 on chromosome 4, complete
              sequence
          Length = 184866

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 4      taaccttggctaacattatccag 26
              ||||||||||| |||||||||||
Sbjct: 110912 taaccttggctgacattatccag 110934
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>gb|AC024162.5| Homo sapiens chromosome 3 clone RP11-320K1 map 3p, complete sequence
          Length = 173370

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 26   gagcaatctcaacagtactcatg 48
            ||||||| |||||||||||||||
Sbjct: 7430 gagcaatgtcaacagtactcatg 7408
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>gb|M19728.1|PT4DTOPII Bacteriophage T4 gene 60 encoding DNA topoisomerase type II,
           complete cds
          Length = 1070

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 72  gggagttgctaaatggaaa 90
           |||||||||||||||||||
Sbjct: 263 gggagttgctaaatggaaa 281
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>dbj|AP000466.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B140B9, complete
             sequence
          Length = 119580

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 125   acaacaagaacacacacaa 143
             |||||||||||||||||||
Sbjct: 91102 acaacaagaacacacacaa 91084


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,700,777
Number of Sequences: 3902068
Number of extensions: 1700777
Number of successful extensions: 116957
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116847
Number of HSP's gapped (non-prelim): 109
length of query: 172
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 150
effective length of database: 17,147,199,772
effective search space: 2572079965800
effective search space used: 2572079965800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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