>emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR)
          Length = 1490

 Score =  351 bits (177), Expect = 6e-94
 Identities = 200/210 (95%)
 Strand = Plus / Minus

                                                                        
Query: 5    tcctcaatcaggcctgcggttttattattccaatgtttgccgaaaattgtacatcttcca 64
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1486 tcctcaatcaggcctgcggttttattattccaatgtttgccgaaaattgtacatcttcca 1427

                                                                        
Query: 65   cacgagatctatgcactctcgcggccactcgcaaggcctttcctgcgtaactgagcttct 124
            ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 1426 cacgagatctatgcactctcgcggccactcgcaaggcctctcctgcgtaattgagcttct 1367

                                                                        
Query: 125  aaaaaggcgtaaacatgataattaccaaataagtttnnnnnnncgacaagttgagcatcg 184
            ||||||||||||||||||||||||||||||||||||       |||||||||||||||||
Sbjct: 1366 aaaaaggcgtaaacatgataattaccaaataagtttaaaaaaacgacaagttgagcatcg 1307

                                          
Query: 185  gccggcgtcctaaatgcatgcatgcatcca 214
            |||||||||||| |||||||||||||||||
Sbjct: 1306 gccggcgtcctagatgcatgcatgcatcca 1277

>emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlorophyilide reductase
          Length = 1484

 Score =  182 bits (92), Expect = 3e-43
 Identities = 135/148 (91%), Gaps = 1/148 (0%)
 Strand = Plus / Minus

                                                                        
Query: 5    tcctcaatcaggcctgcggttttattattccaatgtttgccgaaaattgtacatcttcca 64
            ||||||||||| |||||||||||||||||| |  ||| ||||||||||||||||||||||
Sbjct: 1470 tcctcaatcagacctgcggttttattattc-atggttcgccgaaaattgtacatcttcca 1412

                                                                        
Query: 65   cacgagatctatgcactctcgcggccactcgcaaggcctttcctgcgtaactgagcttct 124
            ||||||||||| |||||||||| | |||||||||||||| ||| |||||| |||| ||||
Sbjct: 1411 cacgagatctacgcactctcgccgacactcgcaaggcctctcccgcgtaattgagtttct 1352

                                        
Query: 125  aaaaaggcgtaaacatgataattaccaa 152
            ||||||||||||| ||||||||||||||
Sbjct: 1351 aaaaaggcgtaaaaatgataattaccaa 1324

>emb|X17067.1|ASPCR Avena sativa mRNA for protochlorophyllide reductase
          Length = 1146

 Score =  125 bits (63), Expect = 6e-26
 Identities = 88/95 (92%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                        
Query: 5    tcctcaatcaggcctgcggttttattattccaatgttt-gccgaaaattgtacatcttcc 63
            |||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 1144 tcctcaattaggcctgcggttttattattccaatggttcgccgaaaattgtacatcttcc 1085

                                               
Query: 64   acacgagatctatgcactctcgcggccactcgcaa 98
            || ||||||||||| |||| ||||| |||||||||
Sbjct: 1084 acccgagatctatgtactcccgcggacactcgcaa 1050

>gb|AC130675.7| Mus musculus chromosome 8, clone RP23-167D18, complete sequence
          Length = 193579

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 135    aaacatgataattaccaaata 155
              |||||||||||||||||||||
Sbjct: 126070 aaacatgataattaccaaata 126050

>gb|AC124417.5| Mus musculus BAC clone RP24-313G11 from chromosome 18, complete
             sequence
          Length = 181811

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    aaattgtacatcttccacac 67
             ||||||||||||||||||||
Sbjct: 24311 aaattgtacatcttccacac 24292

>emb|AL928676.13| Zebrafish DNA sequence from clone DKEY-121K17, complete sequence
          Length = 176196

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     ttttattattccaatgtttg 43
              ||||||||||||||||||||
Sbjct: 105180 ttttattattccaatgtttg 105199

>gb|AY733961.1| Macaca mulatta isolate rq2277-10p14 MLV-derived vector proviral
           integration site
          Length = 362

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 taaatgcatgcatgcatcca 214
           ||||||||||||||||||||
Sbjct: 266 taaatgcatgcatgcatcca 247

>emb|AL845490.8| Mouse DNA sequence from clone RP23-259M16 on chromosome 2, complete
              sequence
          Length = 200794

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    tcctaaatgcatgcatgcat 211
              ||||||||||||||||||||
Sbjct: 118465 tcctaaatgcatgcatgcat 118484


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,569,268
Number of Sequences: 3902068
Number of extensions: 1569268
Number of successful extensions: 129478
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129455
Number of HSP's gapped (non-prelim): 20
length of query: 214
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 192
effective length of database: 17,147,199,772
effective search space: 3292262356224
effective search space used: 3292262356224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)