ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet61a02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MNN9_CANAL (P53697) Protein MNN9 30 1.8
2PRLR_RABIT (P14787) Prolactin receptor precursor (PRL-R) 29 4.0

>MNN9_CANAL (P53697) Protein MNN9|
          Length = 368

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -1

Query: 165 PSGQRAPTCTLTGEKGGTWLVTSPSQRDAASFLNLFPFYNSAE 37
           P G  +   TL G  GG  +V +   RD A F + FPFY+  E
Sbjct: 299 PKGDPSTEMTLDGVGGGAVMVKADVHRDGAMFPS-FPFYHLIE 340



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>PRLR_RABIT (P14787) Prolactin receptor precursor (PRL-R)|
          Length = 616

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -1

Query: 153 RAPTCTLTGEKGGTWLVTSPSQRDAASFLNLFPFYNSAELC 31
           + P  ++ G K  TW +  P Q +  S     P++N A++C
Sbjct: 404 KMPYLSVNGSKSSTWPLLQPGQHNTNS-----PYHNIADMC 439


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,213,866
Number of Sequences: 219361
Number of extensions: 500477
Number of successful extensions: 1335
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 80,573,946
effective HSP length: 34
effective length of database: 73,115,672
effective search space used: 1754776128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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