ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet61a02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK111515.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.036
2emb|BX901972.12| Zebrafish DNA sequence from clone DKEY-24H22 in... 42 0.56
3emb|AL671878.8| Mouse DNA sequence from clone RP23-184D5 on chro... 42 0.56
4ref|NM_124220.1| Arabidopsis thaliana SKS3; copper ion binding A... 40 2.2
5gb|U50308.1| Caenorhabditis elegans cosmid F07C3, complete sequence 40 2.2
6gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete g... 40 2.2
7gb|AC134826.4| Mus musculus BAC clone RP24-459P6 from chromosome... 40 2.2
8gb|AC122379.4| Mus musculus BAC clone RP23-476A7 from chromosome... 40 2.2
9gb|AC124007.5| Homo sapiens BAC clone RP11-526C12 from 4, comple... 40 2.2
10gb|AC163283.3| Mus musculus BAC clone RP23-405A16 from chromosom... 40 2.2
11gb|AC155312.2| Mus musculus BAC clone RP23-411F11 from chromosom... 40 2.2
12ref|NM_072990.1| Caenorhabditis elegans F07C3.3 (F07C3.3) mRNA, ... 40 2.2
13gb|AC136767.6| Homo sapiens chromosome 11, clone RP13-25N22, com... 40 2.2
14dbj|AB020745.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 2.2
15dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 2.2
16gb|AC152418.5| Mus musculus BAC clone RP23-7L11 from chromosome ... 38 8.7
17gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 38 8.7
18gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence 38 8.7
19gb|AC091781.20| Trypanosoma brucei chromosome 4 clone RPCI93-30K... 38 8.7
20gb|AC159410.1| Trypanosoma brucei chromosome 4 clone RPCI93-1D20... 38 8.7
21gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 38 8.7
22gb|AC150664.2| Bos taurus BAC CH240-244O10 (Children's Hospital... 38 8.7
23gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 38 8.7
24gb|AC131665.4| Mus musculus BAC clone RP23-275B16 from chromosom... 38 8.7
25gb|AC102420.10| Mus musculus chromosome 8, clone RP24-553O21, co... 38 8.7
26gb|AC132323.3| Mus musculus BAC clone RP24-268M17 from chromosom... 38 8.7
27ref|XM_653795.1| Aspergillus nidulans FGSC A4 hypothetical prote... 38 8.7
28gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 8.7
29ref|XM_818603.1| Trypanosoma brucei TREU927 clone RPCI93-1D20 hy... 38 8.7
30emb|Z68132.1|CEF09C8 Caenorhabditis elegans Cosmid F09C8, comple... 38 8.7
31gb|AC073264.5| Homo sapiens BAC clone RP11-298A10 from 7, comple... 38 8.7
32gb|AC073318.8| Homo sapiens BAC clone RP11-266F12 from 7, comple... 38 8.7
33gb|AC092448.6| Homo sapiens BAC clone RP11-776E7 from 7, complet... 38 8.7
34gb|AC004831.1| Homo sapiens PAC clone RP4-538P11 from 7, complet... 38 8.7
35gb|AF016450.2| Caenorhabditis elegans cosmid B0238, complete seq... 38 8.7
36gb|AC139356.17| Medicago truncatula clone mth2-12c11, complete s... 38 8.7
37emb|CR974412.1| M.murinus DNA sequence from clone CH257-37C10, c... 38 8.7
38gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's ... 38 8.7
39emb|AL353718.10| Human DNA sequence from clone RP11-472F14 on ch... 38 8.7
40gb|AC087675.9| Homo sapiens chromosome 18, clone RP11-871M19, co... 38 8.7
41emb|CR628337.1| Legionella pneumophila str. Lens complete genome 38 8.7
42emb|CR628336.1| Legionella pneumophila str. Paris complete genome 38 8.7
43gb|AC087399.7| Homo sapiens chromosome 18, clone RP11-451L19, co... 38 8.7
44gb|AC153815.7| Mus musculus 6 BAC RP23-205F19 (Roswell Park Canc... 38 8.7
45emb|AJ243211.1|HSA243211 Homo sapiens DMBT1 candidate tumour sup... 38 8.7
46emb|AL669858.8| Mouse DNA sequence from clone RP23-51G7 on chrom... 38 8.7
47emb|BX323597.9| Zebrafish DNA sequence from clone CH211-227N13 i... 38 8.7
48gb|AC087525.6| Homo sapiens chromosome 15, clone RP11-321G12, co... 38 8.7
49gb|AC079789.7| Homo sapiens BAC clone RP11-475B2 from 4, complet... 38 8.7
50gb|AC090403.8| Homo sapiens chromosome 18, clone RP11-739N10, co... 38 8.7
51gb|AC016207.9| Homo sapiens, clone RP11-25H20, complete sequence 38 8.7
52gb|AC073510.7| Homo sapiens chromosome 8, clone RP11-240O2, comp... 38 8.7
53emb|BX548044.10| Zebrafish DNA sequence from clone DKEY-10B15 in... 38 8.7
54emb|BX569785.12| Zebrafish DNA sequence from clone DKEY-159F4 in... 38 8.7
55gb|AC154534.2| Mus musculus BAC clone RP23-469P20 from chromosom... 38 8.7
56gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genom... 38 8.7
57dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
58dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
59dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
60gb|AC096719.3| Homo sapiens BAC clone RP11-14M23 from 4, complet... 38 8.7
61gb|AC009132.9| Homo sapiens chromosome 16 clone RP11-503F24, com... 38 8.7
62gb|AC078931.9|AC078931 Mus musculus BAC RP23-419E4 (Roswell Par... 38 8.7
63gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067... 38 8.7
64emb|BX470223.14| Zebrafish DNA sequence from clone DKEY-45P9 in ... 38 8.7
65gb|AC132445.3| Mus musculus BAC clone RP23-173F23 from chromosom... 38 8.7
66dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 38 8.7
67dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
68dbj|AK110931.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.7
69emb|AJ271916.1|HSA271916 Homo sapiens partial DMBT1 gene, exon 1 38 8.7
70emb|AL359240.4|CNS05TER Human chromosome 14 DNA sequence BAC R-1... 38 8.7
71gb|BC110734.1| Xenopus laevis cDNA clone MGC:130899 IMAGE:739143... 38 8.7
72gb|AC101850.8| Mus musculus chromosome 5, clone RP23-269D16, com... 38 8.7
73gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 8.7
74emb|BX005233.10| Mouse DNA sequence from clone RP23-214I11 on ch... 38 8.7
75emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa... 38 8.7
76gb|AC150745.2| Mus musculus BAC clone RP24-77E13 from 7, complet... 38 8.7
77emb|CT030713.5| Mouse DNA sequence from clone RP24-94C21 on chro... 38 8.7
78emb|AL592450.8| Mouse DNA sequence from clone RP23-282N6 on chro... 38 8.7 
>dbj|AK111515.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E06, full
            insert sequence
          Length = 2363

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 72   agctagcagcatctctttgggatggtgaggtgaccagccatgtgcca 118
            |||||||||||||||||||||| |  |||||| || | |||||||||
Sbjct: 2302 agctagcagcatctctttgggaggaggaggtggccggtcatgtgcca 2256
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>emb|BX901972.12| Zebrafish DNA sequence from clone DKEY-24H22 in linkage group 1, complete
              sequence
          Length = 212798

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 7      acataaaaacacactttttca 27
              |||||||||||||||||||||
Sbjct: 181825 acataaaaacacactttttca 181845
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>emb|AL671878.8| Mouse DNA sequence from clone RP23-184D5 on chromosome 4, complete
              sequence
          Length = 230395

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 44     gaattataaaatggaaacaaattgaggaa 72
              ||||||||||||||||| ||| |||||||
Sbjct: 183073 gaattataaaatggaaaaaaaatgaggaa 183045
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>ref|NM_124220.1| Arabidopsis thaliana SKS3; copper ion binding AT5G48450 (SKS3)
           mRNA, complete cds
          Length = 1653

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  cacaattcagcagaattata 51
           ||||||||||||||||||||
Sbjct: 750 cacaattcagcagaattata 769
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>gb|U50308.1| Caenorhabditis elegans cosmid F07C3, complete sequence
          Length = 40012

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    aaatggaaacaaattgagga 71
             ||||||||||||||||||||
Sbjct: 12134 aaatggaaacaaattgagga 12153
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>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome
          Length = 200799

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     gaaacaaattgaggaagcta 76
              ||||||||||||||||||||
Sbjct: 154137 gaaacaaattgaggaagcta 154156
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>gb|AC134826.4| Mus musculus BAC clone RP24-459P6 from chromosome 13, complete sequence
          Length = 168202

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 9      ataaaaacacactttttcagttgc 32
              ||||||||||||||||||| ||||
Sbjct: 160398 ataaaaacacactttttcatttgc 160421
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>gb|AC122379.4| Mus musculus BAC clone RP23-476A7 from chromosome 13, complete sequence
          Length = 171737

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 9      ataaaaacacactttttcagttgc 32
              ||||||||||||||||||| ||||
Sbjct: 120884 ataaaaacacactttttcatttgc 120861
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>gb|AC124007.5| Homo sapiens BAC clone RP11-526C12 from 4, complete sequence
          Length = 26449

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 43    agaattataaaatggaaacaaatt 66
             |||||||||||||||||| |||||
Sbjct: 12140 agaattataaaatggaaagaaatt 12117
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>gb|AC163283.3| Mus musculus BAC clone RP23-405A16 from chromosome 12, complete sequence
          Length = 197540

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     aggtgaccagccatgtgcca 118
              ||||||||||||||||||||
Sbjct: 158753 aggtgaccagccatgtgcca 158772
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>gb|AC155312.2| Mus musculus BAC clone RP23-411F11 from chromosome 12, complete
             sequence
          Length = 197795

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    aggtgaccagccatgtgcca 118
             ||||||||||||||||||||
Sbjct: 65296 aggtgaccagccatgtgcca 65315
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>ref|NM_072990.1| Caenorhabditis elegans F07C3.3 (F07C3.3) mRNA, complete cds
          Length = 2376

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 52  aaatggaaacaaattgagga 71
           ||||||||||||||||||||
Sbjct: 158 aaatggaaacaaattgagga 139
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>gb|AC136767.6| Homo sapiens chromosome 11, clone RP13-25N22, complete sequence
          Length = 76050

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    aaaacacactttttcagttg 31
             ||||||||||||||||||||
Sbjct: 40988 aaaacacactttttcagttg 40969
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>dbj|AB020745.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJE7
          Length = 74298

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    cacaattcagcagaattata 51
             ||||||||||||||||||||
Sbjct: 29922 cacaattcagcagaattata 29903
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>dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP13-25N22, complete
             sequence
          Length = 190267

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    aaaacacactttttcagttg 31
             ||||||||||||||||||||
Sbjct: 49265 aaaacacactttttcagttg 49246
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>gb|AC152418.5| Mus musculus BAC clone RP23-7L11 from chromosome 7, complete sequence
          Length = 249571

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 40     agcagaattataaaatggaaacaaatt 66
              ||||||||||||||||  |||||||||
Sbjct: 186223 agcagaattataaaataaaaacaaatt 186249
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 112   tgtgccacccttctcccccgtca 134
             |||||||||||| ||||||||||
Sbjct: 96299 tgtgccacccttttcccccgtca 96321
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>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence
          Length = 1590432

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 156     ggcctgaagggggtgctgc 174
               |||||||||||||||||||
Sbjct: 1151823 ggcctgaagggggtgctgc 1151805
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>gb|AC091781.20| Trypanosoma brucei chromosome 4 clone RPCI93-30K5, complete sequence
          Length = 144951

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 156    ggcctgaagggggtgctgc 174
              |||||||||||||||||||
Sbjct: 120624 ggcctgaagggggtgctgc 120606
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>gb|AC159410.1| Trypanosoma brucei chromosome 4 clone RPCI93-1D20, complete sequence
          Length = 154694

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 156   ggcctgaagggggtgctgc 174
             |||||||||||||||||||
Sbjct: 14168 ggcctgaagggggtgctgc 14186
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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 54      atggaaacaaattgaggaa 72
               |||||||||||||||||||
Sbjct: 1746438 atggaaacaaattgaggaa 1746420
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>gb|AC150664.2| Bos taurus  BAC CH240-244O10 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 158286

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    tataaaatggaaacaaatt 66
             |||||||||||||||||||
Sbjct: 38640 tataaaatggaaacaaatt 38658
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 158     cctgaagggggtgctgccc 176
               |||||||||||||||||||
Sbjct: 1626834 cctgaagggggtgctgccc 1626816
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>gb|AC131665.4| Mus musculus BAC clone RP23-275B16 from chromosome 3, complete sequence
          Length = 180421

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 42     cagaattataaaatggaaa 60
              |||||||||||||||||||
Sbjct: 118401 cagaattataaaatggaaa 118419
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>gb|AC102420.10| Mus musculus chromosome 8, clone RP24-553O21, complete sequence
          Length = 178616

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 55     tggaaacaaattgaggaag 73
              |||||||||||||||||||
Sbjct: 133196 tggaaacaaattgaggaag 133214
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>gb|AC132323.3| Mus musculus BAC clone RP24-268M17 from chromosome 9, complete sequence
          Length = 182469

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 53    aatggaaacaaattgagga 71
             |||||||||||||||||||
Sbjct: 85972 aatggaaacaaattgagga 85954
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>ref|XM_653795.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1283.2), mRNA
          Length = 3147

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 66  tgaggaagctagcagcatc 84
           |||||||||||||||||||
Sbjct: 507 tgaggaagctagcagcatc 525
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 40/47 (85%)
 Strand = Plus / Minus

                                                               
Query: 72       agctagcagcatctctttgggatggtgaggtgaccagccatgtgcca 118
                ||||||||||||||||| |||| |  |||||| || | |||||||||
Sbjct: 16265891 agctagcagcatctcttggggaggaggaggtggccggtcatgtgcca 16265845
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>ref|XM_818603.1| Trypanosoma brucei TREU927 clone RPCI93-1D20 hypothetical protein
            (Tb927.4.4370) partial mRNA
          Length = 1773

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 156  ggcctgaagggggtgctgc 174
            |||||||||||||||||||
Sbjct: 1445 ggcctgaagggggtgctgc 1463
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>emb|Z68132.1|CEF09C8 Caenorhabditis elegans Cosmid F09C8, complete sequence
          Length = 30140

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 11   aaaaacacactttttcagt 29
            |||||||||||||||||||
Sbjct: 7845 aaaaacacactttttcagt 7827
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>gb|AC073264.5| Homo sapiens BAC clone RP11-298A10 from 7, complete sequence
          Length = 200123

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 43   agaattataaaatggaaac 61
            |||||||||||||||||||
Sbjct: 4608 agaattataaaatggaaac 4626
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>gb|AC073318.8| Homo sapiens BAC clone RP11-266F12 from 7, complete sequence
          Length = 162460

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 58    aaacaaattgaggaagctagcag 80
             |||||||||||||||| ||||||
Sbjct: 38698 aaacaaattgaggaagatagcag 38676
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>gb|AC092448.6| Homo sapiens BAC clone RP11-776E7 from 7, complete sequence
          Length = 169788

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     aatagaacataaaaacaca 19
             |||||||||||||||||||
Sbjct: 51929 aatagaacataaaaacaca 51947
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>gb|AC004831.1| Homo sapiens PAC clone RP4-538P11 from 7, complete sequence
          Length = 186044

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      aatagaacataaaaacaca 19
              |||||||||||||||||||
Sbjct: 154140 aatagaacataaaaacaca 154158
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>gb|AF016450.2| Caenorhabditis elegans cosmid B0238, complete sequence
          Length = 41754

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     aatagaacataaaaacaca 19
             |||||||||||||||||||
Sbjct: 22252 aatagaacataaaaacaca 22234
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>gb|AC139356.17| Medicago truncatula clone mth2-12c11, complete sequence
          Length = 120921

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 52    aaatggaaacaaattgagg 70
             |||||||||||||||||||
Sbjct: 94627 aaatggaaacaaattgagg 94645
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>emb|CR974412.1| M.murinus DNA sequence from clone CH257-37C10, complete sequence
          Length = 250701

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     aaaacacactttttcagtt 30
              |||||||||||||||||||
Sbjct: 161832 aaaacacactttttcagtt 161850
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>gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 224930

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 46     attataaaatggaaacaaa 64
              |||||||||||||||||||
Sbjct: 222614 attataaaatggaaacaaa 222632
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>emb|AL353718.10| Human DNA sequence from clone RP11-472F14 on chromosome 9 Cotains the
             3' end of the gene for ubiquitin-like, containing PHD and
             RING finger domains 2 (URF2), a novel gene (PROO365), the
             3' end of the GLDC gene for glycine dehydrogenase
             (decarboxylating; glycine decarboxylase, glycine cleavage
             system protein P) and a pseudogene similar to part of RP42
             homolog, complete sequence
          Length = 146746

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    ttataaaatggaaacaaat 65
             |||||||||||||||||||
Sbjct: 40207 ttataaaatggaaacaaat 40225
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>gb|AC087675.9| Homo sapiens chromosome 18, clone RP11-871M19, complete sequence
          Length = 168201

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     tttttcagttgcacaattc 39
              |||||||||||||||||||
Sbjct: 128759 tttttcagttgcacaattc 128777
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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 54      atggaaacaaattgaggaa 72
               |||||||||||||||||||
Sbjct: 1613552 atggaaacaaattgaggaa 1613570
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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 54      atggaaacaaattgaggaa 72
               |||||||||||||||||||
Sbjct: 1712352 atggaaacaaattgaggaa 1712334
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>gb|AC087399.7| Homo sapiens chromosome 18, clone RP11-451L19, complete sequence
          Length = 171320

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    tttttcagttgcacaattc 39
             |||||||||||||||||||
Sbjct: 56510 tttttcagttgcacaattc 56528
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>gb|AC153815.7| Mus musculus 6 BAC RP23-205F19 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 230983

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    acaaattgaggaagctagc 78
             |||||||||||||||||||
Sbjct: 57174 acaaattgaggaagctagc 57156
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>emb|AJ243211.1|HSA243211 Homo sapiens DMBT1 candidate tumour suppressor gene, exons 1 to 55
          Length = 103330

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    agcatctctttgggatggt 97
             |||||||||||||||||||
Sbjct: 12825 agcatctctttgggatggt 12807
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>emb|AL669858.8| Mouse DNA sequence from clone RP23-51G7 on chromosome 11 Contains a
             ribosomal protein L15 (Rpl15) pseudogene, the Otx1 gene
             for orthodenticle homolog 1, the 3' end of a novel gene
             and two CpG islands, complete sequence
          Length = 240514

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    acactttttcagttgcaca 35
             |||||||||||||||||||
Sbjct: 77511 acactttttcagttgcaca 77493
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>emb|BX323597.9| Zebrafish DNA sequence from clone CH211-227N13 in linkage group 11,
             complete sequence
          Length = 177773

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    tataaaatggaaacaaatt 66
             |||||||||||||||||||
Sbjct: 59826 tataaaatggaaacaaatt 59844
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>gb|AC087525.6| Homo sapiens chromosome 15, clone RP11-321G12, complete sequence
          Length = 157590

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    ctttttcagttgcacaatt 38
             |||||||||||||||||||
Sbjct: 24651 ctttttcagttgcacaatt 24633
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>gb|AC079789.7| Homo sapiens BAC clone RP11-475B2 from 4, complete sequence
          Length = 198586

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      aatagaacataaaaacaca 19
              |||||||||||||||||||
Sbjct: 157926 aatagaacataaaaacaca 157908
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>gb|AC090403.8| Homo sapiens chromosome 18, clone RP11-739N10, complete sequence
          Length = 181250

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 74     ctagcagcatctctttgggatgg 96
              |||||||||| ||||||||||||
Sbjct: 154613 ctagcagcatatctttgggatgg 154591
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>gb|AC016207.9| Homo sapiens, clone RP11-25H20, complete sequence
          Length = 169476

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    ctttttcagttgcacaatt 38
             |||||||||||||||||||
Sbjct: 17413 ctttttcagttgcacaatt 17431
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>gb|AC073510.7| Homo sapiens chromosome 8, clone RP11-240O2, complete sequence
          Length = 133085

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 46    attataaaatggaaacaaattga 68
             ||||||||||||||| |||||||
Sbjct: 70058 attataaaatggaaaaaaattga 70036
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>emb|BX548044.10| Zebrafish DNA sequence from clone DKEY-10B15 in linkage group 10,
              complete sequence
          Length = 250011

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     gcagaattataaaatggaa 59
              |||||||||||||||||||
Sbjct: 248425 gcagaattataaaatggaa 248407
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>emb|BX569785.12| Zebrafish DNA sequence from clone DKEY-159F4 in linkage group 10,
           complete sequence
          Length = 140734

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 41  gcagaattataaaatggaa 59
           |||||||||||||||||||
Sbjct: 414 gcagaattataaaatggaa 396
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>gb|AC154534.2| Mus musculus BAC clone RP23-469P20 from chromosome 16, complete
             sequence
          Length = 178462

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     ataaaaacacactttttca 27
             |||||||||||||||||||
Sbjct: 78107 ataaaaacacactttttca 78089
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>gb|AC118134.3| Oryza sativa chromosome 3 BAC OSJNBb0041J20 genomic sequence, complete
             sequence
          Length = 135585

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 40/47 (85%)
 Strand = Plus / Minus

                                                            
Query: 72    agctagcagcatctctttgggatggtgaggtgaccagccatgtgcca 118
             ||||||||||||||||| |||| |  |||||| || | |||||||||
Sbjct: 63907 agctagcagcatctcttggggaggaggaggtggccggtcatgtgcca 63861
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 37/43 (86%)
 Strand = Plus / Plus

                                                           
Query: 76       agcagcatctctttgggatggtgaggtgaccagccatgtgcca 118
                ||||||| | |||| ||||||||||||| || | |||||||||
Sbjct: 13930140 agcagcaccgcttttggatggtgaggtgtccggtcatgtgcca 13930182
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 40/47 (85%)
 Strand = Plus / Minus

                                                               
Query: 72       agctagcagcatctctttgggatggtgaggtgaccagccatgtgcca 118
                ||||||||||||||||| |||| |  |||||| || | |||||||||
Sbjct: 16259524 agctagcagcatctcttggggaggaggaggtggccggtcatgtgcca 16259478
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 6        aacataaaaacacactttt 24
                |||||||||||||||||||
Sbjct: 17491557 aacataaaaacacactttt 17491539
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>gb|AC096719.3| Homo sapiens BAC clone RP11-14M23 from 4, complete sequence
          Length = 158398

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    cagaattataaaatggaaa 60
             |||||||||||||||||||
Sbjct: 44890 cagaattataaaatggaaa 44872
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>gb|AC009132.9| Homo sapiens chromosome 16 clone RP11-503F24, complete sequence
          Length = 216342

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 86     ctttgggatggtgaggtga 104
              |||||||||||||||||||
Sbjct: 164951 ctttgggatggtgaggtga 164933
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>gb|AC078931.9|AC078931 Mus musculus  BAC RP23-419E4 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 188750

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 10    taaaaacacactttttcagttgc 32
             |||||||||||||||||| ||||
Sbjct: 26567 taaaaacacactttttcatttgc 26545
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>gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4,
              complete sequence
          Length = 405682

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 43     agaattataaaatggaaacaaat 65
              |||| ||||||||||||||||||
Sbjct: 129453 agaaatataaaatggaaacaaat 129475
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>emb|BX470223.14| Zebrafish DNA sequence from clone DKEY-45P9 in linkage group 10,
             complete sequence
          Length = 247644

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    gcagaattataaaatggaa 59
             |||||||||||||||||||
Sbjct: 93691 gcagaattataaaatggaa 93709
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>gb|AC132445.3| Mus musculus BAC clone RP23-173F23 from chromosome unknown, complete
             sequence
          Length = 194715

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     acataaaaacacacttttt 25
             |||||||||||||||||||
Sbjct: 39219 acataaaaacacacttttt 39201
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 113     gtgccacccttctcccccg 131
               |||||||||||||||||||
Sbjct: 2094875 gtgccacccttctcccccg 2094893
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>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0040H05
          Length = 172623

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 6      aacataaaaacacactttt 24
              |||||||||||||||||||
Sbjct: 103554 aacataaaaacacactttt 103536
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>dbj|AK110931.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F10, full
            insert sequence
          Length = 2745

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 37/43 (86%)
 Strand = Plus / Minus

                                                       
Query: 76   agcagcatctctttgggatggtgaggtgaccagccatgtgcca 118
            ||||||| | |||| ||||||||||||| || | |||||||||
Sbjct: 2400 agcagcaccgcttttggatggtgaggtgtccggtcatgtgcca 2358
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>emb|AJ271916.1|HSA271916 Homo sapiens partial DMBT1 gene, exon 1
          Length = 3715

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 79   agcatctctttgggatggt 97
            |||||||||||||||||||
Sbjct: 3298 agcatctctttgggatggt 3280
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>emb|AL359240.4|CNS05TER Human chromosome 14 DNA sequence BAC R-103F13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170761

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 41    gcagaattataaaatggaaacaa 63
             ||||||||| |||||||||||||
Sbjct: 92574 gcagaattaaaaaatggaaacaa 92552
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>gb|BC110734.1| Xenopus laevis cDNA clone MGC:130899 IMAGE:7391433, complete cds
          Length = 2314

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 55   tggaaacaaattgaggaag 73
            |||||||||||||||||||
Sbjct: 1187 tggaaacaaattgaggaag 1169
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>gb|AC101850.8| Mus musculus chromosome 5, clone RP23-269D16, complete sequence
          Length = 184289

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 55    tggaaacaaattgaggaag 73
             |||||||||||||||||||
Sbjct: 80908 tggaaacaaattgaggaag 80926
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 37/43 (86%)
 Strand = Plus / Plus

                                                           
Query: 76       agcagcatctctttgggatggtgaggtgaccagccatgtgcca 118
                ||||||| | |||| ||||||||||||| || | |||||||||
Sbjct: 13884420 agcagcaccgcttttggatggtgaggtgtccggtcatgtgcca 13884462
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>emb|BX005233.10| Mouse DNA sequence from clone RP23-214I11 on chromosome X, complete
              sequence
          Length = 189118

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 7      acataaaaacacacttttt 25
              |||||||||||||||||||
Sbjct: 158949 acataaaaacacacttttt 158931
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>emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa0017A21 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144552

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 37/43 (86%)
 Strand = Plus / Plus

                                                        
Query: 76    agcagcatctctttgggatggtgaggtgaccagccatgtgcca 118
             ||||||| | |||| ||||||||||||| || | |||||||||
Sbjct: 66768 agcagcaccgcttttggatggtgaggtgtccggtcatgtgcca 66810
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>gb|AC150745.2| Mus musculus BAC clone RP24-77E13 from 7, complete sequence
          Length = 232607

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 40     agcagaattataaaatggaaacaaatt 66
              ||||||||||||||||  |||||||||
Sbjct: 151442 agcagaattataaaataaaaacaaatt 151416
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>emb|CT030713.5| Mouse DNA sequence from clone RP24-94C21 on chromosome 17, complete
              sequence
          Length = 190764

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 10     taaaaacacactttttcagttgc 32
              |||||||||||||||||| ||||
Sbjct: 108802 taaaaacacactttttcatttgc 108780
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>emb|AL592450.8| Mouse DNA sequence from clone RP23-282N6 on chromosome 1, complete
             sequence
          Length = 132639

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    ttataaaatggaaacaaat 65
             |||||||||||||||||||
Sbjct: 73111 ttataaaatggaaacaaat 73129


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,160,828
Number of Sequences: 3902068
Number of extensions: 2160828
Number of successful extensions: 161712
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 161197
Number of HSP's gapped (non-prelim): 515
length of query: 177
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 155
effective length of database: 17,147,199,772
effective search space: 2657815964660
effective search space used: 2657815964660
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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