ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet60h10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_730668.1| Plasmodium chabaudi chabaudi hypothetical protein (PC107709.00.0) partial mRNA Length = 776 Score = 46.1 bits (23), Expect = 0.037 Identities = 23/23 (100%) Strand = Plus / Plus Query: 7 aaataaacaatgatattattaat 29 ||||||||||||||||||||||| Sbjct: 83 aaataaacaatgatattattaat 105
>ref|XM_645401.1| Entamoeba histolytica HM-1:IMSS DEAD/DEAH box helicase, putative (216.t00008) partial mRNA Length = 2169 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 attaatacagaaattaataaat 45 |||||||||||||||||||||| Sbjct: 685 attaatacagaaattaataaat 706
>ref|XM_471443.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1518 Score = 42.1 bits (21), Expect = 0.58 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 cattggagcacactaacatga 113 ||||||||||||||||||||| Sbjct: 1310 cattggagcacactaacatga 1330
>gb|AE006884.1| Sulfolobus solfataricus P2 section 243 of 272 of the complete genome Length = 13484 Score = 42.1 bits (21), Expect = 0.58 Identities = 24/25 (96%) Strand = Plus / Minus Query: 6 gaaataaacaatgatattattaata 30 |||||||||||||| |||||||||| Sbjct: 10543 gaaataaacaatgagattattaata 10519
>gb|AC068473.19| Homo sapiens chromosome 18, clone RP11-567M16, complete sequence Length = 175721 Score = 42.1 bits (21), Expect = 0.58 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 aaacacatacatatgccaatataaa 139 |||||||||||||||| |||||||| Sbjct: 14370 aaacacatacatatgcaaatataaa 14346
>gb|AC068910.45| Mus musculus strain C57BL/6J chromosome 9 clone rp23-9g9, complete sequence Length = 169984 Score = 42.1 bits (21), Expect = 0.58 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 aatataaagtgctttaatact 152 ||||||||||||||||||||| Sbjct: 166964 aatataaagtgctttaatact 166944
>gb|AC096785.29| Mus musculus strain C57BL/6J clone rp23-382i2 map 18, complete sequence Length = 201304 Score = 42.1 bits (21), Expect = 0.58 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 aatataaagtgctttaatact 152 ||||||||||||||||||||| Sbjct: 64419 aatataaagtgctttaatact 64399
>emb|AL161454.10| Human DNA sequence from clone RP11-72B4 on chromosome 9 Contains the gene for a novel protein similar to putative repair and recombination helicase RAD26L (LOC56959), a parkinson disease 7 (PARK7) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 144536 Score = 42.1 bits (21), Expect = 0.58 Identities = 24/25 (96%) Strand = Plus / Minus Query: 19 atattattaatacagaaattaataa 43 |||||||||||||||| |||||||| Sbjct: 44633 atattattaatacagatattaataa 44609
>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08, complete sequence Length = 142814 Score = 42.1 bits (21), Expect = 0.58 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 cattggagcacactaacatga 113 ||||||||||||||||||||| Sbjct: 45974 cattggagcacactaacatga 45954
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.58 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 cattggagcacactaacatga 113 ||||||||||||||||||||| Sbjct: 11037319 cattggagcacactaacatga 11037299
>dbj|AK105688.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C01, full insert sequence Length = 2002 Score = 42.1 bits (21), Expect = 0.58 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 cattggagcacactaacatga 113 ||||||||||||||||||||| Sbjct: 1578 cattggagcacactaacatga 1598
>dbj|AK065632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028E03, full insert sequence Length = 2023 Score = 42.1 bits (21), Expect = 0.58 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 cattggagcacactaacatga 113 ||||||||||||||||||||| Sbjct: 1583 cattggagcacactaacatga 1603
>emb|CT030124.12| Mouse DNA sequence from clone RP23-100B15 on chromosome 9, complete sequence Length = 203615 Score = 42.1 bits (21), Expect = 0.58 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 aatataaagtgctttaatact 152 ||||||||||||||||||||| Sbjct: 38302 aatataaagtgctttaatact 38282
>gb|AC074314.29| 433m13, complete sequence Length = 209644 Score = 42.1 bits (21), Expect = 0.58 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 aatataaagtgctttaatact 152 ||||||||||||||||||||| Sbjct: 155135 aatataaagtgctttaatact 155115
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ttattaatacagaaattaat 41 |||||||||||||||||||| Sbjct: 2868595 ttattaatacagaaattaat 2868614
>gb|AC110896.8| Mus musculus chromosome 3, clone RP24-127P11, complete sequence Length = 151699 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aatacagaaattaataaata 46 |||||||||||||||||||| Sbjct: 82778 aatacagaaattaataaata 82759
>emb|CR382279.1| M.truncatula DNA sequence from clone MTH2-15G18 on chromosome 3, complete sequence Length = 140041 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 agcacgaaataaacaatgat 20 |||||||||||||||||||| Sbjct: 68991 agcacgaaataaacaatgat 68972
>emb|CR376756.10| Zebrafish DNA sequence from clone CH211-87A15 in linkage group 23, complete sequence Length = 203373 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ttaatacagaaattaataaa 44 |||||||||||||||||||| Sbjct: 55038 ttaatacagaaattaataaa 55019
>emb|CR361545.10| Zebrafish DNA sequence from clone DKEY-45K13 in linkage group 23, complete sequence Length = 112007 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ttaatacagaaattaataaa 44 |||||||||||||||||||| Sbjct: 79743 ttaatacagaaattaataaa 79762
>emb|CR855332.7| Zebrafish DNA sequence from clone DKEY-31M14 in linkage group 15, complete sequence Length = 212455 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 ttattaatacagaaattaataaat 45 ||||||||| |||||||||||||| Sbjct: 29595 ttattaatatagaaattaataaat 29618
>ref|XM_648689.1| Entamoeba histolytica HM-1:IMSS protein kinase (72.t00036) partial mRNA Length = 4047 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 aaataaacaatgatattatt 26 |||||||||||||||||||| Sbjct: 1652 aaataaacaatgatattatt 1671
>gb|AC145219.16| Medicago truncatula clone mth2-6m1, complete sequence Length = 140462 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 agcacgaaataaacaatgat 20 |||||||||||||||||||| Sbjct: 132734 agcacgaaataaacaatgat 132715
>gb|AC012588.14| Homo sapiens chromosome 18, clone RP11-17A19, complete sequence Length = 148738 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 aacacatacatatgccaatataaa 139 |||| ||||||||||||||||||| Sbjct: 37283 aacaaatacatatgccaatataaa 37306
>gb|AC090206.7| Homo sapiens chromosome 18, clone RP11-349H17, complete sequence Length = 91609 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 aacacatacatatgccaatataaa 139 |||| ||||||||||||||||||| Sbjct: 59103 aacaaatacatatgccaatataaa 59126
>gb|AC125617.1| Homo sapiens 12 BAC RP11-613G6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 134246 Score = 40.1 bits (20), Expect = 2.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 atattattaatacagaaattaataaata 46 |||||||||||||| |||| |||||||| Sbjct: 23962 atattattaatacataaataaataaata 23935
>gb|AC022535.6| Homo sapiens chromosome 10 clone RP11-34C15, complete sequence Length = 178864 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 agaacaatactatataagca 68 |||||||||||||||||||| Sbjct: 120513 agaacaatactatataagca 120532
>gb|AY059631.1| Medicago truncatula phosphoinositide-specific phospholipase C (PLC1) gene, complete cds Length = 6443 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 agcacgaaataaacaatgat 20 |||||||||||||||||||| Sbjct: 4069 agcacgaaataaacaatgat 4050
>emb|BX247880.13| Zebrafish DNA sequence from clone CH211-270J21 in linkage group 7, complete sequence Length = 141643 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 aaataaacaatgatattattaata 30 ||||||||||| |||||||||||| Sbjct: 102216 aaataaacaataatattattaata 102239
>gb|AC152165.2| Mus musculus BAC clone RP24-159A20 from chromosome 5, complete sequence Length = 194519 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 acatgacaaacacatacata 127 |||||||||||||||||||| Sbjct: 172945 acatgacaaacacatacata 172964
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 aataaatacgagaacaatactata 62 ||||||||||| |||||||||||| Sbjct: 2362720 aataaatacgaaaacaatactata 2362743
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 actatataagcacgacaacaaact 80 ||||||| |||||||||||||||| Sbjct: 20042753 actatattagcacgacaacaaact 20042730 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 aaataaacaatgatattat 25 ||||||||||||||||||| Sbjct: 4528782 aaataaacaatgatattat 4528800
>gb|AC130462.3| Homo sapiens chromosome 16 clone CTA-67A1, complete sequence Length = 191594 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 actacaagcacacaccattg 97 |||||||||||||||||||| Sbjct: 120170 actacaagcacacaccattg 120151
>dbj|AP003930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1657_A07 Length = 125217 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 actatataagcacgacaacaaact 80 ||||||| |||||||||||||||| Sbjct: 7356 actatattagcacgacaacaaact 7333
>gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome Length = 791654 Score = 40.1 bits (20), Expect = 2.3 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 17 tgatattattaatac-agaaattaataa 43 ||||||||||||||| |||||||||||| Sbjct: 658405 tgatattattaatacaagaaattaataa 658378
>emb|BX957241.13| Zebrafish DNA sequence from clone CH211-197N10 in linkage group 19, complete sequence Length = 199001 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 aaataaacaatgatattattaata 30 ||||||| |||||||||||||||| Sbjct: 146743 aaataaataatgatattattaata 146720
>dbj|AP003850.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1793_E11 Length = 101342 Score = 40.1 bits (20), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 actatataagcacgacaacaaact 80 ||||||| |||||||||||||||| Sbjct: 76313 actatattagcacgacaacaaact 76290
>dbj|AP006688.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L14, TM0383, complete sequence Length = 81488 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aaataaacaatgatattatt 26 |||||||||||||||||||| Sbjct: 64872 aaataaacaatgatattatt 64853
>gb|AY689437.1| Deerpox virus W-1170-84, complete genome Length = 170560 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 23 tattaatacagaaattaataaat 45 |||||||||| |||||||||||| Sbjct: 144794 tattaatacaaaaattaataaat 144772
>gb|AC117827.6| Mus musculus chromosome 1, clone RP24-88L2, complete sequence Length = 213655 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gatattattaatacagaaa 36 ||||||||||||||||||| Sbjct: 141678 gatattattaatacagaaa 141660
>gb|AY573177.1| Somatia sp. YSUW04038 cytochrome oxidase subunit II (COII) gene, partial cds; mitochondrial Length = 669 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 aataaatacgagaacaata 57 ||||||||||||||||||| Sbjct: 225 aataaatacgagaacaata 207
>gb|AC153798.1| Mus musculus BAC RP23-262P15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191619 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 atacagaaattaataaata 46 ||||||||||||||||||| Sbjct: 148297 atacagaaattaataaata 148315
>gb|AE006123.1| Pasteurella multocida subsp. multocida str. Pm70 section 90 of 204 of the complete genome Length = 11950 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 aacaatgatattattaata 30 ||||||||||||||||||| Sbjct: 11731 aacaatgatattattaata 11713
>gb|AC161490.7| Mus musculus chromosome 7, clone RP23-307M23, complete sequence Length = 169596 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 aatacagaaattaataaat 45 ||||||||||||||||||| Sbjct: 108095 aatacagaaattaataaat 108113
>gb|AC162920.2| Mus musculus BAC clone RP23-357C16 from chromosome 9, complete sequence Length = 203466 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 114 caaacacatacatatgcca 132 ||||||||||||||||||| Sbjct: 51684 caaacacatacatatgcca 51666
>gb|AC116387.7| Mus musculus chromosome 18, clone RP23-37P9, complete sequence Length = 217116 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 24 attaatacagaaattaataaata 46 |||||||||||| |||||||||| Sbjct: 22709 attaatacagaagttaataaata 22731
>gb|AC147353.2| Xenopus tropicalis clone CH216-23O22, complete sequence Length = 154980 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 110 atgacaaacacatacatat 128 ||||||||||||||||||| Sbjct: 70702 atgacaaacacatacatat 70720
>emb|CR626888.9| Zebrafish DNA sequence from clone CH211-250B7 in linkage group 16, complete sequence Length = 156550 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 ttttccgagcgaacgctgc 170 ||||||||||||||||||| Sbjct: 10167 ttttccgagcgaacgctgc 10185
>gb|AF057056.1| Uroleucon erigeronensis NADH dehydrogenase subunit 1-like protein (ND1) gene, partial sequence; mitochondrial gene for mitochondrial product Length = 554 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 taatacagaaattaataaa 44 ||||||||||||||||||| Sbjct: 141 taatacagaaattaataaa 123
>emb|CT010493.12| Mouse DNA sequence from clone RP23-140P6 on chromosome 14, complete sequence Length = 223982 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 actacaagcacacaccatt 96 ||||||||||||||||||| Sbjct: 145294 actacaagcacacaccatt 145276
>emb|CT027659.2| Macaca mulatta chromosome 9 BAC CH250-288D8, complete sequence Length = 175570 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 ttattaatacagaaattaataaa 44 ||||||||| ||||||||||||| Sbjct: 22478 ttattaataaagaaattaataaa 22500
>emb|CR847854.12| Zebrafish DNA sequence from clone DKEY-229J6 in linkage group 8, complete sequence Length = 155365 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 ttttccgagcgaacgctgc 170 ||||||||||||||||||| Sbjct: 26528 ttttccgagcgaacgctgc 26546
>gb|AC125139.4| Mus musculus BAC clone RP24-326G1 from chromosome 1, complete sequence Length = 149229 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 gatattattaatacagaaa 36 ||||||||||||||||||| Sbjct: 96934 gatattattaatacagaaa 96952
>emb|BX957306.12| Zebrafish DNA sequence from clone DKEY-119H24 in linkage group 1, complete sequence Length = 224487 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 9 ataaacaatgatattattaatac 31 |||||||||||||| |||||||| Sbjct: 162343 ataaacaatgatatgattaatac 162321
>gb|AC122186.2| Mus musculus BAC clone RP23-19M20 from 1, complete sequence Length = 160653 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 atattattaatacagaaat 37 ||||||||||||||||||| Sbjct: 52504 atattattaatacagaaat 52522
>gb|AC122027.1| Mus musculus BAC clone RP24-390L20 from 1, complete sequence Length = 150136 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 21 attattaatacagaaattaataa 43 ||||||||||| ||||||||||| Sbjct: 96627 attattaatactgaaattaataa 96605
>gb|AC003078.1| Homo sapiens BAC clone GS1-117O10 from 7, complete sequence Length = 182433 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 133 atataaagtgctttaatactttt 155 |||||||||||||||||| |||| Sbjct: 141526 atataaagtgctttaataatttt 141504
>gb|AC073871.7| Homo sapiens BAC clone RP11-260H17 from 7, complete sequence Length = 100703 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 ttattaatacagaaattaataaa 44 ||||||||| ||||||||||||| Sbjct: 35327 ttattaataaagaaattaataaa 35349 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 22 ttattaatacagaaattaataaa 44 ||||||||| ||||||||||||| Sbjct: 35280 ttattaataaagaaattaataaa 35302
>gb|AC004866.1| Homo sapiens PAC clone RP4-728H9 from 7, complete sequence Length = 138102 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 117 acacatacatatgccaatataaa 139 ||||| ||||||||||||||||| Sbjct: 110394 acacacacatatgccaatataaa 110416
>gb|AC113974.9| Mus musculus chromosome 18, clone RP23-140D3, complete sequence Length = 270111 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 attaatacagaaattaataaata 46 |||||||||||| |||||||||| Sbjct: 140965 attaatacagaagttaataaata 140943
>gb|AC142298.1| Pan troglodytes BAC clone RP43-99N14 from 7, complete sequence Length = 162900 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 133 atataaagtgctttaatactttt 155 |||||||||||||||||| |||| Sbjct: 126664 atataaagtgctttaataatttt 126642
>gb|AC164009.3| Mus musculus chromosome 18, clone RP24-362C21, complete sequence Length = 134903 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 aattaataaatacgagaac 53 ||||||||||||||||||| Sbjct: 78099 aattaataaatacgagaac 78117
>emb|CR381587.14| Zebrafish DNA sequence from clone CH211-142C4, complete sequence Length = 169210 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 23 tattaatacagaaattaataaat 45 |||||||||| |||||||||||| Sbjct: 133179 tattaatacaaaaattaataaat 133157
>emb|CR931814.13| Zebrafish DNA sequence from clone DKEY-236E8 in linkage group 5, complete sequence Length = 155089 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 ttttccgagcgaacgctgc 170 ||||||||||||||||||| Sbjct: 122618 ttttccgagcgaacgctgc 122600
>emb|CR376844.12| Zebrafish DNA sequence from clone DKEYP-51B7 in linkage group 8, complete sequence Length = 203472 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 23 tattaatacagaaattaataaat 45 |||||||||| |||||||||||| Sbjct: 2774 tattaatacacaaattaataaat 2752
>emb|AL390294.19| Human DNA sequence from clone RP11-379F12 on chromosome 10 Contains the 3' end of the TAF3 gene for TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa (TAF140,TAFII140), the GATA3 gene for GATA binding protein 3 (HDR,MGC5445), two novel genes and 3 CpG islands, complete sequence Length = 151559 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 attaatacagaaattaataaata 46 |||||||||||||| |||||||| Sbjct: 117210 attaatacagaaataaataaata 117188
>gb|AE014819.1| Plasmodium falciparum 3D7 chromosome 14 section 4 of 13 of the complete sequence Length = 251448 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 8 aataaacaatgatattattaata 30 ||||||||||||||||| ||||| Sbjct: 9496 aataaacaatgatattaataata 9474
>emb|AL358789.22| Human DNA sequence from clone RP11-507C22 on chromosome 1 Contains the 5' end of the MCOLN2 gene for mucolipin 2, the MCOLN3 gene for mucolipin 3, the gene for testis development protein NYD-SP29 (NYD-SP29) and two CpG islands, complete sequence Length = 165799 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 aaactacaagcacacacca 94 ||||||||||||||||||| Sbjct: 39553 aaactacaagcacacacca 39535
>gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1 of 8 of the complete sequence Length = 250743 Score = 38.2 bits (19), Expect = 9.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 17 tgatattattaatacagaaattaataaatac 47 |||||||||||| ||| |||| ||||||||| Sbjct: 237859 tgatattattaacacacaaataaataaatac 237889
>emb|AL355357.13| Human DNA sequence from clone RP11-69I22 on chromosome 6, complete sequence Length = 116261 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 aatacagaaattaataaat 45 ||||||||||||||||||| Sbjct: 22095 aatacagaaattaataaat 22113
>emb|AL355674.10| Human DNA sequence from clone RP11-171A24 on chromosome 9 Contains the 5' end of the RORB gene for RAR-related orphan receptor B protein (RZRB, ROR-BETA), two novel genes and two CpG islands, complete sequence Length = 174874 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 atattattaatacagaaat 37 ||||||||||||||||||| Sbjct: 86068 atattattaatacagaaat 86086
>emb|AL353572.13| Human DNA sequence from clone RP11-350E12 on chromosome 9 Contains the gene for cell cycle related kinase (CCRK,CDCH), two novel pseudogenes, a 40S ribosomal protein S10 pseudogene (RPS10P3), a pseudogene similar to part of a novel protein and two CpG islands, complete sequence Length = 207295 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 aaactacaagcacacacca 94 ||||||||||||||||||| Sbjct: 107290 aaactacaagcacacacca 107308
>emb|AL136111.10| Human DNA sequence from clone RP13-73G13 on chromosome X Contains GSSs, complete sequence Length = 68759 Score = 38.2 bits (19), Expect = 9.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 99 agcacactaacatgacaaacacatacatatg 129 |||| |||| |||| |||||||||||||||| Sbjct: 38646 agcaaactaccatggcaaacacatacatatg 38616
>emb|AL035660.16|HS300I2 Human DNA sequence from clone RP1-300I2 on chromosome 20q12-13.12 Contains a novel gene and the SLPI gene for secretory leukocyte protease inhibitor (antileukoproteinase), complete sequence Length = 63796 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 111 tgacaaacacatacatatg 129 ||||||||||||||||||| Sbjct: 1212 tgacaaacacatacatatg 1230
>emb|CR450814.4| Zebrafish DNA sequence from clone CH211-157B11 in linkage group 6, complete sequence Length = 158142 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 137 aaagtgctttaatactttt 155 ||||||||||||||||||| Sbjct: 95993 aaagtgctttaatactttt 96011
>ref|XM_970485.1| PREDICTED: Tribolium castaneum similar to Probable cytochrome P450 6a20 (CYPVIA20) (LOC664483), mRNA Length = 1941 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 taagcacgacaacaaacta 81 ||||||||||||||||||| Sbjct: 1455 taagcacgacaacaaacta 1473
>emb|AJ517314.2|CIN517314 Ciona intestinalis complete mitochondrial genome Length = 14790 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 aaacaatgatattattaat 29 ||||||||||||||||||| Sbjct: 6777 aaacaatgatattattaat 6795
>emb|CR407599.9| Zebrafish DNA sequence from clone CH211-273O22 in linkage group 13, complete sequence Length = 32537 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 ttttccgagcgaacgctgc 170 ||||||||||||||||||| Sbjct: 29173 ttttccgagcgaacgctgc 29155
>emb|BX088597.18| Zebrafish DNA sequence from clone DKEY-171P23 in linkage group 5, complete sequence Length = 172098 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 ttttccgagcgaacgctgc 170 ||||||||||||||||||| Sbjct: 152351 ttttccgagcgaacgctgc 152333
>emb|BX323583.36| Zebrafish DNA sequence from clone CH211-245I19 in linkage group 14, complete sequence Length = 168098 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 aacaatgatattattaata 30 ||||||||||||||||||| Sbjct: 104042 aacaatgatattattaata 104060
>emb|BX248332.14| Zebrafish DNA sequence from clone CH211-212O2 in linkage group 9, complete sequence Length = 237498 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 attaatacagaaattaataaata 46 |||||||||||| |||||||||| Sbjct: 79926 attaatacagaatttaataaata 79904
>emb|AL845544.11| Zebrafish DNA sequence from clone BUSM1-133F4 in linkage group 7 Contains three CpG islands, complete sequence Length = 110786 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 ttttccgagcgaacgctgc 170 ||||||||||||||||||| Sbjct: 90603 ttttccgagcgaacgctgc 90585
>emb|BX548000.6| Zebrafish DNA sequence from clone CH211-199M8 in linkage group 11, complete sequence Length = 216767 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 ttttccgagcgaacgctgc 170 ||||||||||||||||||| Sbjct: 130447 ttttccgagcgaacgctgc 130429
>emb|Z47556.1|HSSG1SG2 H.sapiens genes for semenogelin I and semenogelin II Length = 28069 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 111 tgacaaacacatacatatg 129 ||||||||||||||||||| Sbjct: 26309 tgacaaacacatacatatg 26327
>gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, complete sequence Length = 190848 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 6 gaaataaacaatgatattattaa 28 |||||||||||||||||| |||| Sbjct: 72914 gaaataaacaatgatatttttaa 72936
>gb|AC105273.2| Homo sapiens chromosome 1 clone RP4-716B13, complete sequence Length = 138485 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 attaatacagaaattaataaata 46 |||| |||||||||||||||||| Sbjct: 107719 attattacagaaattaataaata 107697
>dbj|AK138488.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330039C20 product:unclassifiable, full insert sequence Length = 3077 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 114 caaacacatacatatgcca 132 ||||||||||||||||||| Sbjct: 2159 caaacacatacatatgcca 2141
>gb|AC093829.2| Homo sapiens BAC clone RP11-401E5 from 4, complete sequence Length = 169483 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 20 tattattaatacagaaattaata 42 ||||||||||||||| ||||||| Sbjct: 154484 tattattaatacagacattaata 154462
>gb|AC021733.12| Homo sapiens chromosome 8, clone RP11-775B15, complete sequence Length = 158341 Score = 38.2 bits (19), Expect = 9.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 99 agcacactaacatgacaaacacatacatatg 129 |||||||||||||| || || |||||||||| Sbjct: 19230 agcacactaacatggcacacgcatacatatg 19260
>gb|AC090451.6| Homo sapiens chromosome 8, clone RP11-318N11, complete sequence Length = 160671 Score = 38.2 bits (19), Expect = 9.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 99 agcacactaacatgacaaacacatacatatg 129 |||||||||||||| || || |||||||||| Sbjct: 131023 agcacactaacatggcacacgcatacatatg 131053
>gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, complete sequence Length = 216706 Score = 38.2 bits (19), Expect = 9.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 99 agcacactaacatgacaaacacatacatatg 129 ||||||| |||||| || ||||||||||||| Sbjct: 186628 agcacaccaacatggcacacacatacatatg 186658
>gb|AC087821.5| Homo sapiens chromosome 8, clone RP11-108A14, complete sequence Length = 167949 Score = 38.2 bits (19), Expect = 9.1 Identities = 28/31 (90%) Strand = Plus / Plus Query: 99 agcacactaacatgacaaacacatacatatg 129 ||||||| |||||| || ||||||||||||| Sbjct: 25332 agcacaccaacatggcacacacatacatatg 25362
>gb|DP000037.1| Pan troglodytes target 106 genomic scaffold Length = 302717 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 111 tgacaaacacatacatatg 129 ||||||||||||||||||| Sbjct: 261455 tgacaaacacatacatatg 261473
>emb|BX294178.13| Zebrafish DNA sequence from clone CH211-271C18 in linkage group 7, complete sequence Length = 131441 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 19 atattattaatacagaaattaat 41 |||||||||||| |||||||||| Sbjct: 102830 atattattaataaagaaattaat 102808
>gb|AC005079.6|AC005079 Homo sapiens BAC clone CTA-252P22 from 7, complete sequence Length = 415268 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 aactacaagcacacaccat 95 ||||||||||||||||||| Sbjct: 366659 aactacaagcacacaccat 366677
>gb|AC159472.6| Mus musculus 10 BAC RP23-244J20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 213230 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 atacagaaattaataaata 46 ||||||||||||||||||| Sbjct: 40493 atacagaaattaataaata 40511
>gb|AC073528.26|AC073528 Homo sapiens 12 BAC RP11-8P16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167041 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 20 tattattaatacagaaattaata 42 |||| |||||||||||||||||| Sbjct: 24470 tattcttaatacagaaattaata 24448
>ref|XM_393059.2| PREDICTED: Apis mellifera similar to S10e ribosomal protein (LOC409552), mRNA Length = 873 Score = 38.2 bits (19), Expect = 9.1 Identities = 25/27 (92%) Strand = Plus / Plus Query: 19 atattattaatacagaaattaataaat 45 |||||||||||||| ||||| |||||| Sbjct: 802 atattattaatacataaatttataaat 828
>ref|XM_623300.1| PREDICTED: Apis mellifera similar to S10e ribosomal protein (LOC409552), mRNA Length = 845 Score = 38.2 bits (19), Expect = 9.1 Identities = 25/27 (92%) Strand = Plus / Plus Query: 19 atattattaatacagaaattaataaat 45 |||||||||||||| ||||| |||||| Sbjct: 774 atattattaatacataaatttataaat 800
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 acacaccattggagcacac 105 ||||||||||||||||||| Sbjct: 26874854 acacaccattggagcacac 26874872 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 ctaacatgacaaacacata 123 ||||||||||||||||||| Sbjct: 19475493 ctaacatgacaaacacata 19475511
>gb|AC160227.3| Loxodonta africana clone VMRC15-528D5, complete sequence Length = 106354 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 121 atacatatgccaatataaa 139 ||||||||||||||||||| Sbjct: 89713 atacatatgccaatataaa 89695
>emb|BX664706.9| Zebrafish DNA sequence from clone CH211-251F6 in linkage group 20, complete sequence Length = 103574 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 108 acatgacaaacacatacat 126 ||||||||||||||||||| Sbjct: 67857 acatgacaaacacatacat 67839
>gb|AC153774.3| Loxodonta africana clone VMRC15-554J14, complete sequence Length = 136822 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 121 atacatatgccaatataaa 139 ||||||||||||||||||| Sbjct: 7650 atacatatgccaatataaa 7632
>gb|AC083872.2|AC083872 Homo sapiens chromosome 7 clone RP11-639H21, complete sequence Length = 186609 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 atattattaatacagaaat 37 ||||||||||||||||||| Sbjct: 17329 atattattaatacagaaat 17311
>gb|AF223412.1|AF223412 Zea mays kinesin-like calmodulin binding protein (KCBP) gene, complete cds Length = 10420 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 ctaacatgacaaacacata 123 ||||||||||||||||||| Sbjct: 7258 ctaacatgacaaacacata 7240
>gb|AC023827.7| Homo sapiens chromosome 16 clone RP11-42I10, complete sequence Length = 152813 Score = 38.2 bits (19), Expect = 9.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 99 agcacactaacatgacaaacacatacatatg 129 ||||||| ||||||||| | ||||||||||| Sbjct: 80428 agcacaccaacatgacacatacatacatatg 80398
>gb|AC004674.1| Homo sapiens X BAC GSHB-600G8 (Genome Systems Human BAC library) complete sequence Length = 158886 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 taatacagaaattaataaa 44 ||||||||||||||||||| Sbjct: 65332 taatacagaaattaataaa 65350
>gb|AC007611.5|AC007611 Homo sapiens chromosome 16 clone RP11-452G23, complete sequence Length = 158958 Score = 38.2 bits (19), Expect = 9.1 Identities = 28/31 (90%) Strand = Plus / Minus Query: 99 agcacactaacatgacaaacacatacatatg 129 ||||||| ||||||||| | ||||||||||| Sbjct: 20722 agcacaccaacatgacacatacatacatatg 20692
>emb|BX649334.5| Zebrafish DNA sequence from clone DKEYP-6A3 in linkage group 22, complete sequence Length = 184977 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 72 caacaaactacaagcacacacca 94 |||||||| |||||||||||||| Sbjct: 109758 caacaaacaacaagcacacacca 109736
>gb|AC129951.9| Mus musculus chromosome 15, clone RP23-127B14, complete sequence Length = 211987 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 ttaatacagaaattaataaatac 47 ||||||||||||| ||||||||| Sbjct: 179079 ttaatacagaaatgaataaatac 179101
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 ctaacatgacaaacacata 123 ||||||||||||||||||| Sbjct: 93020 ctaacatgacaaacacata 93038
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1046_F10 Length = 118472 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 aaataaacaatgatattat 25 ||||||||||||||||||| Sbjct: 107501 aaataaacaatgatattat 107519
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 acacaccattggagcacac 105 ||||||||||||||||||| Sbjct: 53397 acacaccattggagcacac 53415
>emb|AL831747.24| Zebrafish DNA sequence from clone CH211-258G4 in linkage group 9, complete sequence Length = 156348 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 ttttccgagcgaacgctgc 170 ||||||||||||||||||| Sbjct: 138614 ttttccgagcgaacgctgc 138632
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 acacaccattggagcacac 105 ||||||||||||||||||| Sbjct: 140907 acacaccattggagcacac 140925
>dbj|BS000060.1| Pan troglodytes chromosome 22 clone:RP43-086L15, map 22, complete sequences Length = 159919 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 106 taacatgacaaacacatac 124 ||||||||||||||||||| Sbjct: 51457 taacatgacaaacacatac 51475
>dbj|BS000059.1| Pan troglodytes chromosome 22 clone:RP43-022N17, map 22, complete sequences Length = 127718 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 106 taacatgacaaacacatac 124 ||||||||||||||||||| Sbjct: 110879 taacatgacaaacacatac 110897
>emb|BX001023.12| Zebrafish DNA sequence from clone CH211-233F10 in linkage group 5, complete sequence Length = 168064 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 152 ttttccgagcgaacgctgc 170 ||||||||||||||||||| Sbjct: 9829 ttttccgagcgaacgctgc 9847
>emb|AL928824.13| Zebrafish DNA sequence from clone CH211-105D18 in linkage group 6, complete sequence Length = 189742 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 ttttccgagcgaacgctgc 170 ||||||||||||||||||| Sbjct: 24117 ttttccgagcgaacgctgc 24099
>dbj|AK099980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129E14, full insert sequence Length = 4559 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 aaataaacaatgatattat 25 ||||||||||||||||||| Sbjct: 2321 aaataaacaatgatattat 2339
>gb|U00063.1| Caenorhabditis elegans cosmid F56C9, complete sequence Length = 35028 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 113 acaaacacatacatatgccaata 135 ||||||||||||||||| ||||| Sbjct: 13870 acaaacacatacatatgacaata 13848
>emb|AL391152.3|CNS06C7Y Human chromosome 14 DNA sequence BAC R-613G13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 189385 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 134 tataaagtgctttaatacttttc 156 |||||||||||||||| |||||| Sbjct: 84464 tataaagtgctttaattcttttc 84486
>emb|BX957242.15| Zebrafish DNA sequence from clone CH211-129B17 in linkage group 19, complete sequence Length = 167629 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 aacaaactacaagcacaca 91 ||||||||||||||||||| Sbjct: 118634 aacaaactacaagcacaca 118616
>emb|BX005202.14| Zebrafish DNA sequence from clone DKEY-224N5 in linkage group 13, complete sequence Length = 220733 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 19 atattattaatacagaaattaat 41 |||||||||||| |||||||||| Sbjct: 114132 atattattaataaagaaattaat 114110
>emb|BX323031.7| Zebrafish DNA sequence from clone DKEYP-7B3 in linkage group 18, complete sequence Length = 164748 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 ttttccgagcgaacgctgc 170 ||||||||||||||||||| Sbjct: 1344 ttttccgagcgaacgctgc 1326
>emb|CR388138.29| Zebrafish DNA sequence from clone DKEY-255D8 in linkage group 8, complete sequence Length = 232320 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 96 tggagcacactaacatgac 114 ||||||||||||||||||| Sbjct: 10921 tggagcacactaacatgac 10939
>dbj|D12705.1|PSEPAP41 Pseudomonas aeruginosa transposon-like structure, TnAP41, which carries the genes for pyocin AP41 Length = 3541 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 gcacgacaacaaactacaa 84 ||||||||||||||||||| Sbjct: 417 gcacgacaacaaactacaa 399
>dbj|AK113187.1| Ciona intestinalis cDNA, clone:ciad013l18, full insert sequence Length = 2240 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 cacactaacatgacaaaca 119 ||||||||||||||||||| Sbjct: 2101 cacactaacatgacaaaca 2119
>gb|AC147744.17| Mus musculus chromosome 18, clone RP23-398N23, complete sequence Length = 201455 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 aattaataaatacgagaac 53 ||||||||||||||||||| Sbjct: 52649 aattaataaatacgagaac 52667
>emb|AL928814.8| Zebrafish DNA sequence from clone CH211-149O12, complete sequence Length = 170669 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 24 attaatacagaaattaataaata 46 |||||||||||| |||||||||| Sbjct: 76234 attaatacagaatttaataaata 76256
>gb|AC110375.4| Mus musculus BAC clone RP23-409L20 from 18, complete sequence Length = 191505 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 attaatacagaaattaataaata 46 |||||||||||| |||||||||| Sbjct: 10502 attaatacagaagttaataaata 10480
>gb|AC172110.2| Rhesus Macaque CHR7 BAC CH250-119L7 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 219949 Score = 38.2 bits (19), Expect = 9.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 133 atataaagtgctttaatactttt 155 |||||||||||||||||| |||| Sbjct: 127944 atataaagtgctttaataatttt 127922
>emb|X51471.1|CHVFTRNA Vicia faba chloroplast tRNA-Leu, tRNA-Phe, tRNA-His, ORFX, NADH-deydrogenase genes & partial sequence ORFx & psbA genes Length = 7138 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 atacagaaattaataaata 46 ||||||||||||||||||| Sbjct: 6995 atacagaaattaataaata 6977
>emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chromosome X, complete sequence Length = 230186 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 aatacagaaattaataaat 45 ||||||||||||||||||| Sbjct: 174357 aatacagaaattaataaat 174339
>dbj|AP003115.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1000E4 Length = 115937 Score = 38.2 bits (19), Expect = 9.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 aaactacaagcacacacca 94 ||||||||||||||||||| Sbjct: 81590 aaactacaagcacacacca 81608 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,449,283 Number of Sequences: 3902068 Number of extensions: 2449283 Number of successful extensions: 208631 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 207778 Number of HSP's gapped (non-prelim): 854 length of query: 184 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 162 effective length of database: 17,147,199,772 effective search space: 2777846363064 effective search space used: 2777846363064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
