ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet60h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransgly... 129 3e-27
2emb|CR391965.8| Zebrafish DNA sequence from clone CH211-124O16 i... 42 0.61
3emb|Z49556.1|SCYJR056C S.cerevisiae chromosome X reading frame O... 42 0.61
4gb|L47993.1|YSCORFSAA Saccharomyces cerevisiae ORF genes, comple... 42 0.61
5emb|BX571829.7| Zebrafish DNA sequence from clone DKEY-256M7 in ... 40 2.4
6gb|AC092360.2| Homo sapiens chromosome 5 clone RP11-346B2, compl... 40 2.4
7dbj|AB052172.1| Macaca fascicularis brain cDNA, clone:QccE-18211... 40 2.4
8ref|NM_000068.2| Homo sapiens calcium channel, voltage-dependent... 38 9.5
9ref|NM_023035.1| Homo sapiens calcium channel, voltage-dependent... 38 9.5
10ref|XM_654058.1| Aspergillus nidulans FGSC A4 hypothetical prote... 38 9.5
11gb|AC078937.1| Homo sapiens BAC clone GS1-113G16 from 7, complet... 38 9.5
12ref|XM_446163.1| Candida glabrata CBS138, CAGL0F04411g partial mRNA 38 9.5
13emb|CR847506.8| Zebrafish DNA sequence from clone CH211-225N13 i... 38 9.5
14emb|BX927353.7| Zebrafish DNA sequence from clone CH211-83F14 in... 38 9.5
15gb|AC084387.1| Mus musculus BAC clone RP23-93H2 from 7, complete... 38 9.5
16ref|XM_533458.2| PREDICTED: Canis familiaris RNA binding motif p... 38 9.5
17gb|AC109610.25| Mus musculus strain C57BL/6J clone rp23-305g19 m... 38 9.5
18emb|CR383660.9| Zebrafish DNA sequence from clone DKEY-1H22 in l... 38 9.5
19gb|AC165175.2| Zea mays clone ZMMBBb-136N21, complete sequence 38 9.5
20emb|AL354707.17| Human DNA sequence from clone RP11-390F4 on chr... 38 9.5
21gb|AE008889.1| Salmonella typhimurium LT2, section 193 of 220 of... 38 9.5
22emb|CR380952.1| Candida glabrata strain CBS138 chromosome F comp... 38 9.5
23emb|AL929301.6| Zebrafish DNA sequence from clone BUSM1-SL7 Cont... 38 9.5
24emb|AL627279.1| Salmonella enterica serovar Typhi (Salmonella ty... 38 9.5
25emb|BX548054.19| Zebrafish DNA sequence from clone CH211-237N4 i... 38 9.5
26gb|AC162943.2| Mus musculus BAC clone RP23-76K9 from chromosome ... 38 9.5
27emb|X99897.1|HSPQCCA1 H.sapiens mRNA for P/Q-type calcium channe... 38 9.5
28gb|AF004884.1|AF004884 Homo sapiens neuronal calcium channel alp... 38 9.5
29gb|AF004883.1|AF004883 Homo sapiens neuronal calcium channel alp... 38 9.5
30emb|BX255965.12| Zebrafish DNA sequence from clone CH211-270C19,... 38 9.5
31emb|BX324225.7| Zebrafish DNA sequence from clone DKEY-180I22 in... 38 9.5
32gb|AC026805.5|AC026805 Homo sapiens chromosome 19 clone LLNLR-26... 38 9.5
33gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 38 9.5
34emb|BX005128.4| Zebrafish DNA sequence from clone CH211-129H14 i... 38 9.5
35dbj|BS000111.1| Pan troglodytes chromosome 22 clone:PTB-093K04, ... 38 9.5
36dbj|BS000110.1| Pan troglodytes chromosome 22 clone:PTB-090P24, ... 38 9.5
37ref|XM_560555.1| Anopheles gambiae str. PEST ENSANGP00000025790 ... 38 9.5
38ref|XM_560625.1| Anopheles gambiae str. PEST ENSANGP00000027443 ... 38 9.5
39ref|XM_555219.1| Anopheles gambiae str. PEST ENSANGP00000016373 ... 38 9.5
40gb|AC154794.2| Mus musculus BAC clone RP24-485J1 from 16, comple... 38 9.5
41emb|BX571881.6| Zebrafish DNA sequence from clone DKEY-251M4 in ... 38 9.5
42gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 38 9.5
43dbj|AP001710.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 9.5
44dbj|AP000247.2| Homo sapiens genomic DNA, chromosome 21q, clone:... 38 9.5
45emb|CT025753.11| Mouse DNA sequence from clone RP24-340F12 on ch... 38 9.5
46emb|CT009575.8| Mouse DNA sequence from clone RP23-107N17 on chr... 38 9.5
47gb|U79666.1|HSU79666 Homo sapiens alpha1A-voltage-dependent calc... 38 9.5
48emb|Z80130.1|HSCAC19 H.sapiens CACNL1A4 gene, exon 19 38 9.5
49emb|AL390798.3|CNS06C7P Human chromosome 14 DNA sequence BAC R-2... 38 9.5
50dbj|AP000208.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 38 9.5
51dbj|AB035727.2| Homo sapiens CACNA1A mRNA for alpha1A-voltage-de... 38 9.5
52dbj|AB035726.1| Homo sapiens CACNA1A mRNA for alpha1A-voltage-de... 38 9.5 
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA)
          Length = 1174

 Score =  129 bits (65), Expect = 3e-27
 Identities = 130/149 (87%), Gaps = 7/149 (4%)
 Strand = Plus / Minus

                                                                        
Query: 51   cgtgacaaagagcaa-cagaagaatctaccaccggctacatttcaccttatccccca-ca 108
            |||||||| |||||| ||||||||||||||||| ||| |||||||| |||||||||  ||
Sbjct: 1112 cgtgacaaggagcaaacagaagaatctaccacccgctccatttcacattatcccccctca 1053

                                                                        
Query: 109  ccagtacttatttatcatacagtaca-----gacgcttccatcttccctatctccggtca 163
            |  || ||||||||||||||||||||     |||||  ||||||||||||||||||| | 
Sbjct: 1052 ctggtccttatttatcatacagtacaatacagacgcccccatcttccctatctccggccg 993

                                         
Query: 164  tcttcctccggcgatcgacgtatacacgg 192
            |||||||||||||||||||||||||||||
Sbjct: 992  tcttcctccggcgatcgacgtatacacgg 964
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>emb|CR391965.8| Zebrafish DNA sequence from clone CH211-124O16 in linkage group 24,
              complete sequence
          Length = 157418

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 98     tatcccccacaccagtactta 118
              |||||||||||||||||||||
Sbjct: 150615 tatcccccacaccagtactta 150635
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>emb|Z49556.1|SCYJR056C S.cerevisiae chromosome X reading frame ORF YJR056c
          Length = 4795

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 35   tgagcgtgagcgtgatcgtga 55
            |||||||||||||||||||||
Sbjct: 2631 tgagcgtgagcgtgatcgtga 2611
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>gb|L47993.1|YSCORFSAA Saccharomyces cerevisiae ORF genes, complete cds
          Length = 61989

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 35   tgagcgtgagcgtgatcgtga 55
            |||||||||||||||||||||
Sbjct: 6149 tgagcgtgagcgtgatcgtga 6129
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>emb|BX571829.7| Zebrafish DNA sequence from clone DKEY-256M7 in linkage group 12,
              complete sequence
          Length = 196942

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     cggctacatttcaccttatc 101
              ||||||||||||||||||||
Sbjct: 174524 cggctacatttcaccttatc 174505
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>gb|AC092360.2| Homo sapiens chromosome 5 clone RP11-346B2, complete sequence
          Length = 130737

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    caccagtacttatttatcat 126
              ||||||||||||||||||||
Sbjct: 116528 caccagtacttatttatcat 116547
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>dbj|AB052172.1| Macaca fascicularis brain cDNA, clone:QccE-18211, similar to human
           hypothetical protein FLJ143145, mRNA, AK125135
          Length = 3890

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 127 acagtacagacgcttccatcttcc 150
           |||||||||||| |||||||||||
Sbjct: 790 acagtacagacggttccatcttcc 813
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>ref|NM_000068.2| Homo sapiens calcium channel, voltage-dependent, P/Q type, alpha 1A
            subunit (CACNA1A), transcript variant 1, mRNA
          Length = 7807

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   aaagagcaacagaagaatc 75
            |||||||||||||||||||
Sbjct: 2566 aaagagcaacagaagaatc 2584
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>ref|NM_023035.1| Homo sapiens calcium channel, voltage-dependent, P/Q type, alpha 1A
            subunit (CACNA1A), transcript variant 2, mRNA
          Length = 7812

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   aaagagcaacagaagaatc 75
            |||||||||||||||||||
Sbjct: 2566 aaagagcaacagaagaatc 2584
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>ref|XM_654058.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1546.2), mRNA
          Length = 4818

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 35  tgagcgtgagcgtgatcgtgaca 57
           ||||||||||||||| |||||||
Sbjct: 432 tgagcgtgagcgtgagcgtgaca 454
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>gb|AC078937.1| Homo sapiens BAC clone GS1-113G16 from 7, complete sequence
          Length = 62035

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 8     atgaggcatatactattac 26
             |||||||||||||||||||
Sbjct: 53605 atgaggcatatactattac 53587
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>ref|XM_446163.1| Candida glabrata CBS138, CAGL0F04411g partial mRNA
          Length = 639

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 55 acaaagagcaacagaagaa 73
          |||||||||||||||||||
Sbjct: 74 acaaagagcaacagaagaa 92
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>emb|CR847506.8| Zebrafish DNA sequence from clone CH211-225N13 in linkage group 11,
             complete sequence
          Length = 199426

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 33    attgagcgtgagcgtgatcgtga 55
             ||||||||||||||||| |||||
Sbjct: 99945 attgagcgtgagcgtgagcgtga 99923
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>emb|BX927353.7| Zebrafish DNA sequence from clone CH211-83F14 in linkage group 2,
            complete sequence
          Length = 94558

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 33   attgagcgtgagcgtgatcgtga 55
            ||||||||||||||||| |||||
Sbjct: 7198 attgagcgtgagcgtgagcgtga 7220
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>gb|AC084387.1| Mus musculus BAC clone RP23-93H2 from 7, complete sequence
          Length = 175948

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 140   ttccatcttccctatctcc 158
             |||||||||||||||||||
Sbjct: 63629 ttccatcttccctatctcc 63647
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>ref|XM_533458.2| PREDICTED: Canis familiaris RNA binding motif protein 16 (KIAA1116),
            mRNA
          Length = 4690

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 34   ttgagcgtgagcgtgatcg 52
            |||||||||||||||||||
Sbjct: 1324 ttgagcgtgagcgtgatcg 1306
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>gb|AC109610.25| Mus musculus strain C57BL/6J clone rp23-305g19 map 17, complete
           sequence
          Length = 194366

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 140 ttccatcttccctatctcc 158
           |||||||||||||||||||
Sbjct: 515 ttccatcttccctatctcc 497
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>emb|CR383660.9| Zebrafish DNA sequence from clone DKEY-1H22 in linkage group 14,
             complete sequence
          Length = 139631

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 33    attgagcgtgagcgtgatcgtga 55
             ||||||||||||||||| |||||
Sbjct: 40789 attgagcgtgagcgtgagcgtga 40811
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>gb|AC165175.2| Zea mays clone ZMMBBb-136N21, complete sequence
          Length = 129274

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     agatgaggcatatactatt 24
             |||||||||||||||||||
Sbjct: 25142 agatgaggcatatactatt 25160
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>emb|AL354707.17| Human DNA sequence from clone RP11-390F4 on chromosome 9 Contains the 5'
              end of a ring finger protein 2 (RNF2) pseudogene, the 3'
              end of a novel gene, a 60S ribosomal protein L35a (RPL35A)
              pseudogene, three novel genes, a gene similar to small
              nuclear ribonucleoprotein polypeptide E (SNRPE), the 5' end
              of the JMJD2C gene for jumonji domain containing 2C, a
              chromosome 20 open reading frame 45 (C20orf45) pseudogene
              and six CpG islands, complete sequence
          Length = 170970

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 96     cttatcccccacaccagta 114
              |||||||||||||||||||
Sbjct: 151123 cttatcccccacaccagta 151141
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>gb|AE008889.1| Salmonella typhimurium LT2, section 193 of 220 of the complete genome
          Length = 20504

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 49    atcgtgacaaagagcaacagaag 71
             |||||||||| ||||||||||||
Sbjct: 14241 atcgtgacaatgagcaacagaag 14263
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>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence
          Length = 927101

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 55     acaaagagcaacagaagaa 73
              |||||||||||||||||||
Sbjct: 441787 acaaagagcaacagaagaa 441769
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>emb|AL929301.6| Zebrafish DNA sequence from clone BUSM1-SL7 Contains two genes for
             novel serine proteases, a novel serine protease
             pseudogene, three genes similar to vertebrate PIM1 (pim-1
             oncogene), a putative novel gene and a CpG island,
             complete sequence
          Length = 64032

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 33    attgagcgtgagcgtgatcgtga 55
             ||||||||||||||||| |||||
Sbjct: 39745 attgagcgtgagcgtgagcgtga 39723
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>emb|AL627279.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 15/20
          Length = 264050

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 49     atcgtgacaaagagcaacagaag 71
              |||||||||| ||||||||||||
Sbjct: 212195 atcgtgacaatgagcaacagaag 212173
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>emb|BX548054.19| Zebrafish DNA sequence from clone CH211-237N4 in linkage group 14,
             complete sequence
          Length = 128658

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 33    attgagcgtgagcgtgatcgtga 55
             ||||||||||||||||| |||||
Sbjct: 77130 attgagcgtgagcgtgagcgtga 77108
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>gb|AC162943.2| Mus musculus BAC clone RP23-76K9 from chromosome 16, complete sequence
          Length = 184984

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 139   cttccatcttccctatctc 157
             |||||||||||||||||||
Sbjct: 86949 cttccatcttccctatctc 86967
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>emb|X99897.1|HSPQCCA1 H.sapiens mRNA for P/Q-type calcium channel alpha1 subunit
          Length = 7446

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   aaagagcaacagaagaatc 75
            |||||||||||||||||||
Sbjct: 2559 aaagagcaacagaagaatc 2577
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>gb|AF004884.1|AF004884 Homo sapiens neuronal calcium channel alpha 1A subunit isoform A-1
            mRNA, complete cds
          Length = 7808

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   aaagagcaacagaagaatc 75
            |||||||||||||||||||
Sbjct: 2529 aaagagcaacagaagaatc 2547
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>gb|AF004883.1|AF004883 Homo sapiens neuronal calcium channel alpha 1A subunit isoform 1A-2
            mRNA, complete cds
          Length = 7791

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   aaagagcaacagaagaatc 75
            |||||||||||||||||||
Sbjct: 2529 aaagagcaacagaagaatc 2547
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>emb|BX255965.12| Zebrafish DNA sequence from clone CH211-270C19, complete sequence
          Length = 148298

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 33   attgagcgtgagcgtgatcgtga 55
            ||||||||||||||||| |||||
Sbjct: 5736 attgagcgtgagcgtgagcgtga 5714
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>emb|BX324225.7| Zebrafish DNA sequence from clone DKEY-180I22 in linkage group 21,
              complete sequence
          Length = 207125

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 33     attgagcgtgagcgtgatcgtga 55
              ||||||||||||||||| |||||
Sbjct: 177398 attgagcgtgagcgtgagcgtga 177376
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>gb|AC026805.5|AC026805 Homo sapiens chromosome 19 clone LLNLR-268A1, complete sequence
          Length = 40639

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    aaagagcaacagaagaatc 75
             |||||||||||||||||||
Sbjct: 17437 aaagagcaacagaagaatc 17419
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 49      atcgtgacaaagagcaacagaag 71
               |||||||||| ||||||||||||
Sbjct: 4047271 atcgtgacaatgagcaacagaag 4047293
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>emb|BX005128.4| Zebrafish DNA sequence from clone CH211-129H14 in linkage group 17,
             complete sequence
          Length = 152345

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 33    attgagcgtgagcgtgatcgtga 55
             ||||||||||||||||| |||||
Sbjct: 12591 attgagcgtgagcgtgagcgtga 12613
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>dbj|BS000111.1| Pan troglodytes chromosome 22 clone:PTB-093K04, map 22, complete
            sequences
          Length = 184428

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 15   atatactattacacacgaa 33
            |||||||||||||||||||
Sbjct: 4072 atatactattacacacgaa 4090
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>dbj|BS000110.1| Pan troglodytes chromosome 22 clone:PTB-090P24, map 22, complete
              sequences
          Length = 157686

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 15     atatactattacacacgaa 33
              |||||||||||||||||||
Sbjct: 132084 atatactattacacacgaa 132102
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>ref|XM_560555.1| Anopheles gambiae str. PEST ENSANGP00000025790
           (ENSANGG00000025127), partial mRNA
          Length = 1593

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 63  caacagaagaatctaccac 81
           |||||||||||||||||||
Sbjct: 620 caacagaagaatctaccac 638



 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 63  caacagaagaatctaccac 81
           |||||||||||||||||||
Sbjct: 527 caacagaagaatctaccac 545



 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 63 caacagaagaatctaccac 81
          |||||||||||||||||||
Sbjct: 71 caacagaagaatctaccac 89
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>ref|XM_560625.1| Anopheles gambiae str. PEST ENSANGP00000027443
           (ENSANGG00000023491), partial mRNA
          Length = 1023

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 63  caacagaagaatctaccac 81
           |||||||||||||||||||
Sbjct: 332 caacagaagaatctaccac 350
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>ref|XM_555219.1| Anopheles gambiae str. PEST ENSANGP00000016373
           (ENSANGG00000013884), partial mRNA
          Length = 807

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 63  caacagaagaatctaccac 81
           |||||||||||||||||||
Sbjct: 656 caacagaagaatctaccac 674



 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 63  caacagaagaatctaccac 81
           |||||||||||||||||||
Sbjct: 86  caacagaagaatctaccac 104
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>gb|AC154794.2| Mus musculus BAC clone RP24-485J1 from 16, complete sequence
          Length = 179257

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 139    cttccatcttccctatctc 157
              |||||||||||||||||||
Sbjct: 166717 cttccatcttccctatctc 166735
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>emb|BX571881.6| Zebrafish DNA sequence from clone DKEY-251M4 in linkage group 18,
             complete sequence
          Length = 100776

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 33    attgagcgtgagcgtgatcgtga 55
             ||||||||||||||||| |||||
Sbjct: 77232 attgagcgtgagcgtgagcgtga 77254
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 49      atcgtgacaaagagcaacagaag 71
               |||||||||| ||||||||||||
Sbjct: 3661858 atcgtgacaatgagcaacagaag 3661836
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>dbj|AP001710.1| Homo sapiens genomic DNA, chromosome 21q, section 54/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 15     atatactattacacacgaa 33
              |||||||||||||||||||
Sbjct: 167725 atatactattacacacgaa 167743
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>dbj|AP000247.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP5-871G18, complete
             sequence
          Length = 113919

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    atatactattacacacgaa 33
             |||||||||||||||||||
Sbjct: 22271 atatactattacacacgaa 22289
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>emb|CT025753.11| Mouse DNA sequence from clone RP24-340F12 on chromosome 16, complete
              sequence
          Length = 231697

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 139    cttccatcttccctatctc 157
              |||||||||||||||||||
Sbjct: 131317 cttccatcttccctatctc 131299
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>emb|CT009575.8| Mouse DNA sequence from clone RP23-107N17 on chromosome 17, complete
              sequence
          Length = 226188

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 140    ttccatcttccctatctcc 158
              |||||||||||||||||||
Sbjct: 180940 ttccatcttccctatctcc 180922
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>gb|U79666.1|HSU79666 Homo sapiens alpha1A-voltage-dependent calcium channel mRNA, splice
            form BI-1-Vi-GGCAG, complete cds
          Length = 7827

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   aaagagcaacagaagaatc 75
            |||||||||||||||||||
Sbjct: 2501 aaagagcaacagaagaatc 2519
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>emb|Z80130.1|HSCAC19 H.sapiens CACNL1A4 gene, exon 19
          Length = 1113

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  aaagagcaacagaagaatc 75
           |||||||||||||||||||
Sbjct: 211 aaagagcaacagaagaatc 229
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>emb|AL390798.3|CNS06C7P Human chromosome 14 DNA sequence BAC R-21O19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 154140

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 138   gcttccatcttccctatct 156
             |||||||||||||||||||
Sbjct: 20063 gcttccatcttccctatct 20045
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>dbj|AP000208.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             f43D11-119B8, segment 6/12, complete sequence
          Length = 100000

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    atatactattacacacgaa 33
             |||||||||||||||||||
Sbjct: 41713 atatactattacacacgaa 41731
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>dbj|AB035727.2| Homo sapiens CACNA1A mRNA for alpha1A-voltage-dependent calcium
            channel, complete cds, isolate:TMDN-CNT-001
          Length = 7521

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   aaagagcaacagaagaatc 75
            |||||||||||||||||||
Sbjct: 2281 aaagagcaacagaagaatc 2299
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>dbj|AB035726.1| Homo sapiens CACNA1A mRNA for alpha1A-voltage-dependent calcium
            channel, partial cds, isolate:TMDN-SCA6-001
          Length = 7450

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   aaagagcaacagaagaatc 75
            |||||||||||||||||||
Sbjct: 2319 aaagagcaacagaagaatc 2337


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,489,213
Number of Sequences: 3902068
Number of extensions: 1489213
Number of successful extensions: 105871
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105706
Number of HSP's gapped (non-prelim): 153
length of query: 192
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 170
effective length of database: 17,147,199,772
effective search space: 2915023961240
effective search space used: 2915023961240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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