>TR95_MOUSE (Q6PGF3) Thyroid hormone receptor-associated protein complex 95 kDa|
           component (Trap95) (Thyroid hormone receptor-associated
           protein 5) (Vitamin D3 receptor-interacting protein
           complex component DRIP92)
          Length = 828

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -2

Query: 200 YVPKWRNFLSLRFPCPCLPFANPQSCQ*W*ANSTDVFYDDDELSRYFSI 54
           YV +W  +    + CP LP A   SC+   A +TD+  DD +L+    I
Sbjct: 5   YVCEWEKWAKSTY-CPSLPLACAWSCRNLTAFTTDLRNDDQDLTHMIHI 52

>LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like protein 3)|
          Length = 470

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -2

Query: 188 WRNFLSLRFPCPCLPFANPQSCQ*W*ANSTDVFYDDDELSRYFSIFVFGYCC 33
           WRN L L F C  L F +        A +++++Y +D+L +    ++FG CC
Sbjct: 132 WRN-LGLIFNCTFLLFGSVIQLI---ACASNIYYINDKLDKRTWTYIFGACC 179

>LAX3_MEDTR (Q9FEL6) Auxin transporter-like protein 3 (AUX1-like protein 3)|
           (MtLAX3)
          Length = 465

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -2

Query: 188 WRNFLSLRFPCPCLPFANPQSCQ*W*ANSTDVFYDDDELSRYFSIFVFGYCC 33
           WRN L L F C  L F +        A +++++Y +D L +    ++FG CC
Sbjct: 127 WRN-LGLFFNCTFLLFGSVIQLI---ACASNIYYINDHLDKRTWTYIFGACC 174

>LAX2_ARATH (Q9S836) Auxin transporter-like protein 2 (AUX1-like protein 2)|
          Length = 483

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -2

Query: 188 WRNFLSLRFPCPCLPFANPQSCQ*W*ANSTDVFYDDDELSRYFSIFVFGYCC 33
           WRN + L F C  L F +        A +++++Y +D L +    ++FG CC
Sbjct: 128 WRN-VGLAFNCTFLLFGSVIQLI---ACASNIYYINDNLDKRTWTYIFGACC 175

>VAV3_HUMAN (Q9UKW4) Protein vav-3|
          Length = 847

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 161 PCPCLPFANPQSCQ*W*ANSTDVFYDDDEL 72
           PCPC+P     SCQ W A + +    + EL
Sbjct: 657 PCPCVPKPVDYSCQPWYAGAMERLQAETEL 686

>LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like protein 5)|
           (MtLAX5)
          Length = 490

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -2

Query: 188 WRNFLSLRFPCPCLPFANPQSCQ*W*ANSTDVFYDDDELSRYFSIFVFGYCC 33
           WRN + L F C  L F +        A +++++Y +D L +    ++FG CC
Sbjct: 130 WRN-VGLGFNCTFLLFGSVIQLI---ACASNIYYINDNLDKRTWTYIFGACC 177

>BUB1B_HUMAN (O60566) Mitotic checkpoint serine/threonine-protein kinase BUB1|
           beta (EC 2.7.11.1) (hBUBR1) (MAD3/BUB1-related protein
           kinase) (Mitotic checkpoint kinase MAD3L) (SSK1)
          Length = 1050

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 263 QRQDDCLLWHQYI 225
           Q QD C++WHQYI
Sbjct: 827 QYQDGCIVWHQYI 839

>INT1_CANAL (P53705) Integrin alpha chain-like protein (Alpha-INT1)|
          Length = 1664

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
 Frame = +2

Query: 77   HHHHKTRQSNLPTIIDS---FVGLQKEDRGK 160
            HHHH  +++++P ++D     VGLQ  +RGK
Sbjct: 1288 HHHHHKQKTDIPGVVDDEIPDVGLQ--ERGK 1316

>TR95_HUMAN (Q9Y2X0) Thyroid hormone receptor-associated protein complex 95 kDa|
           component (Trap95) (Thyroid hormone receptor-associated
           protein 5) (Vitamin D3 receptor-interacting protein
           complex component DRIP92)
          Length = 877

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -2

Query: 200 YVPKWRNFLSLRFPCPCLPFANPQSCQ*W*ANSTDVFYDDDELSRYFSI 54
           YV +W  + S    CP +P A   SC+   A + D+  DD +L+R   I
Sbjct: 17  YVCEWEKW-SKSTHCPSVPLACAWSCRNLIAFTMDLRSDDQDLTRMIHI 64


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,684,776
Number of Sequences: 219361
Number of extensions: 767840
Number of successful extensions: 2048
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2043
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)