| Clone Name | rbaet60f10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC025483.7| Homo sapiens chromosome 15, clone RP11-398I10, complete sequence Length = 180096 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 aaaaacaagaaagggtgccag 38 ||||||||||||||||||||| Sbjct: 174337 aaaaacaagaaagggtgccag 174317
>gb|AC090083.3| Homo sapiens chromosome 15, clone CTD-2311K11, complete sequence Length = 96253 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 aaaaacaagaaagggtgccag 38 ||||||||||||||||||||| Sbjct: 25958 aaaaacaagaaagggtgccag 25938
>ref|NM_180473.1| Arabidopsis thaliana unknown protein AT5G10710 transcript variant AT5G10710.2 mRNA, complete cds Length = 1170 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gacagaaaggaacaggtccg 140 |||||||||||||||||||| Sbjct: 677 gacagaaaggaacaggtccg 696
>ref|NM_121109.2| Arabidopsis thaliana unknown protein AT5G10710 transcript variant AT5G10710.1 mRNA, complete cds Length = 1270 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gacagaaaggaacaggtccg 140 |||||||||||||||||||| Sbjct: 777 gacagaaaggaacaggtccg 796
>gb|AF360281.1| Arabidopsis thaliana unknown protein (At5g10710) mRNA, complete cds Length = 1285 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gacagaaaggaacaggtccg 140 |||||||||||||||||||| Sbjct: 776 gacagaaaggaacaggtccg 795
>gb|AC164004.3| Mus musculus chromosome 5, clone RP23-58C20, complete sequence Length = 198872 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 aagacagaaaggaacaggtc 138 |||||||||||||||||||| Sbjct: 112990 aagacagaaaggaacaggtc 112971
>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence Length = 175838 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 caagatacccaagacagaaa 128 |||||||||||||||||||| Sbjct: 53284 caagatacccaagacagaaa 53303
>gb|AC020901.8|AC020901 Homo sapiens chromosome 5 clone CTC-527N11, complete sequence Length = 180636 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 caagatacccaagacagaaa 128 |||||||||||||||||||| Sbjct: 161539 caagatacccaagacagaaa 161558
>emb|BX830763.1|CNS09ZHR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1195 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gacagaaaggaacaggtccg 140 |||||||||||||||||||| Sbjct: 734 gacagaaaggaacaggtccg 753
>gb|BT002314.1| Arabidopsis thaliana clone C104667 unknown protein (At5g10710) mRNA, complete cds Length = 970 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gacagaaaggaacaggtccg 140 |||||||||||||||||||| Sbjct: 577 gacagaaaggaacaggtccg 596
>emb|BX842684.4| Zebrafish DNA sequence from clone DKEY-33I22 in linkage group 20, complete sequence Length = 140982 Score = 40.1 bits (20), Expect = 2.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 tttaaaaacaagaaagggtgccagacaa 42 |||||||| |||||||||||| |||||| Sbjct: 51770 tttaaaaagaagaaagggtgcaagacaa 51743
>gb|AC102476.14| Mus musculus chromosome 5, clone RP24-396L12, complete sequence Length = 181047 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 aagacagaaaggaacaggtc 138 |||||||||||||||||||| Sbjct: 168314 aagacagaaaggaacaggtc 168333
>gb|AC118017.15| Mus musculus chromosome 7, clone RP23-457C1, complete sequence Length = 196427 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 13 gctttaaaaacaagaaagggtgc 35 ||||||||||||| ||||||||| Sbjct: 23257 gctttaaaaacaacaaagggtgc 23235
>gb|AC122407.4| Mus musculus BAC clone RP24-129G24 from chromosome 12, complete sequence Length = 137860 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 aaaaacaagaaagggtgcc 36 ||||||||||||||||||| Sbjct: 96112 aaaaacaagaaagggtgcc 96130
>gb|AC004946.1| Homo sapiens PAC clone RP5-1006K12 from 7, complete sequence Length = 107102 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 taagatccaaatgccagca 73 ||||||||||||||||||| Sbjct: 24507 taagatccaaatgccagca 24525
>gb|AC147471.14| Medicago truncatula clone mth2-7a7, complete sequence Length = 139792 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 78 acataatccaaataacaat 96 ||||||||||||||||||| Sbjct: 92255 acataatccaaataacaat 92273
>emb|AL121880.21|HSJ1174H9 Human DNA sequence from clone RP5-1174H9 on chromosome X, complete sequence Length = 87065 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 110 aagatacccaagacagaaa 128 ||||||||||||||||||| Sbjct: 55028 aagatacccaagacagaaa 55046
>gb|AC164561.2| Mus musculus BAC clone RP23-187G5 from chromosome 12, complete sequence Length = 210186 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 ctttaaaaacaagaaaggg 32 ||||||||||||||||||| Sbjct: 114 ctttaaaaacaagaaaggg 96
>emb|BX510922.8| Zebrafish DNA sequence from clone DKEY-50I6 in linkage group 21, complete sequence Length = 87532 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 aaataatacgctttaaaaa 22 ||||||||||||||||||| Sbjct: 41433 aaataatacgctttaaaaa 41415
>gb|AC146755.23| Medicago truncatula clone mth2-15i15, complete sequence Length = 108159 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 aataatacgctttaaaaac 23 ||||||||||||||||||| Sbjct: 107507 aataatacgctttaaaaac 107489
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 gcacataatccaaataaca 94 ||||||||||||||||||| Sbjct: 23172979 gcacataatccaaataaca 23172961
>gb|AC017080.8| Homo sapiens BAC clone RP11-469G4 from 2, complete sequence Length = 184012 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 117 ccaagacagaaaggaacag 135 ||||||||||||||||||| Sbjct: 126107 ccaagacagaaaggaacag 126089
>gb|AC114776.3| Homo sapiens BAC clone RP11-480O8 from 2, complete sequence Length = 169190 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 acataatccaaataacaat 96 ||||||||||||||||||| Sbjct: 133080 acataatccaaataacaat 133062
>gb|AC132394.3| Mus musculus BAC clone RP23-391F16 from chromosome 6, complete sequence Length = 197171 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 acaagaaagggtgccagac 40 ||||||||||||||||||| Sbjct: 51827 acaagaaagggtgccagac 51845
>dbj|AP001148.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-762L8, complete sequences Length = 169340 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 119 aagacagaaaggaacaggt 137 ||||||||||||||||||| Sbjct: 119607 aagacagaaaggaacaggt 119589
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 3 aaaataatacgctttaaaaacaagaaa 29 ||||||||||||||| |||| |||||| Sbjct: 1917663 aaaataatacgctttcaaaaaaagaaa 1917689
>emb|CT033780.10| Mouse DNA sequence from clone RP24-329E14 on chromosome 12, complete sequence Length = 205515 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 ctttaaaaacaagaaaggg 32 ||||||||||||||||||| Sbjct: 82331 ctttaaaaacaagaaaggg 82313
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 76 gcacataatccaaataaca 94 ||||||||||||||||||| Sbjct: 23101170 gcacataatccaaataaca 23101152
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 76 gcacataatccaaataaca 94 ||||||||||||||||||| Sbjct: 5418 gcacataatccaaataaca 5436 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,832,528 Number of Sequences: 3902068 Number of extensions: 1832528 Number of successful extensions: 123893 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 123717 Number of HSP's gapped (non-prelim): 176 length of query: 170 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 148 effective length of database: 17,147,199,772 effective search space: 2537785566256 effective search space used: 2537785566256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)