ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet60f03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PI3K2_SOYBN (P42348) Phosphatidylinositol 3-kinase, nodule isofo... 28 5.0
2HIS51_SYNPX (Q7U924) Imidazole glycerol phosphate synthase subun... 28 6.5
3PI3K1_SOYBN (P42347) Phosphatidylinositol 3-kinase, root isoform... 28 6.5

>PI3K2_SOYBN (P42348) Phosphatidylinositol 3-kinase, nodule isoform (EC|
           2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K)
           (SPI3K-1)
          Length = 812

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -2

Query: 119 AHNFLLYDLCMYEHRLCSIYAYVNSSTAYTYPTPVS 12
           +H +L+ D C +EHR+     +  S   + +P+P++
Sbjct: 205 SHMYLVVDFCSFEHRV----VFQESGANFLFPSPIA 236



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>HIS51_SYNPX (Q7U924) Imidazole glycerol phosphate synthase subunit hisH1 (EC|
           2.4.2.-) (IGP synthase glutamine amidotransferase
           subunit) (IGP synthase subunit hisH1) (ImGP synthase
           subunit hisH1) (IGPS subunit hisH1)
          Length = 210

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -2

Query: 155 NFTFVHD-SAFRLAHNFLLYDLCMYEHRLCS 66
           +F FVH   AF + H+F  Y  C Y+ ++ S
Sbjct: 146 DFYFVHSYGAFNVPHDFTTYSYCNYDAKIIS 176



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>PI3K1_SOYBN (P42347) Phosphatidylinositol 3-kinase, root isoform (EC 2.7.1.137)|
           (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-5)
          Length = 814

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -2

Query: 119 AHNFLLYDLCMYEHRLCSIYAYVNSSTAYTYPTPVS 12
           +H +L+ D C +EHR+     +  S   + +P+P++
Sbjct: 207 SHLYLVVDFCSFEHRV----VFQESGANFLFPSPIA 238


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,092,231
Number of Sequences: 219361
Number of extensions: 429557
Number of successful extensions: 674
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 80,573,946
effective HSP length: 48
effective length of database: 70,044,618
effective search space used: 1681070832
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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