| Clone Name | rbaet60a07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MALT_VIBPA (Q87FQ5) HTH-type transcriptional regulator malT (ATP... | 29 | 2.9 | 2 | PCK1_SCHPO (P36582) Protein kinase C-like 1 (EC 2.7.11.13) | 28 | 8.5 |
|---|
>MALT_VIBPA (Q87FQ5) HTH-type transcriptional regulator malT (ATP-dependent| transcriptional activator malT) Length = 902 Score = 29.3 bits (64), Expect = 2.9 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 3 FISLFSSFVSHKRPAFLL*KEKGKKRNHFLCWCQ 104 F +LF F+SH+R A + +EK RN + W Q Sbjct: 320 FHNLFGEFLSHERQARIPQQEKDLHRNAAVAWLQ 353
>PCK1_SCHPO (P36582) Protein kinase C-like 1 (EC 2.7.11.13)| Length = 988 Score = 27.7 bits (60), Expect = 8.5 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 7/38 (18%) Frame = +3 Query: 105 AAWCVAVVFFLPSRRM-------CNVTQHLECRARVVD 197 A WC FFLP RR C +T H +C + D Sbjct: 491 AQWCAHCGFFLPLRRKDCFKCVECGITCHGQCAHLIPD 528 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,738,056 Number of Sequences: 219361 Number of extensions: 524768 Number of successful extensions: 1909 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1903 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1909 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)