ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet60a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SYE_CHLTR (O84451) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Gluta... 28 8.4

>SYE_CHLTR (O84451) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 506

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 174 PMDGQLQFNDRCRGCCDFFW 115
           P+ G+  F D+C+GC  F W
Sbjct: 161 PLTGESVFEDQCKGCVVFPW 180


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,270,604
Number of Sequences: 219361
Number of extensions: 539422
Number of successful extensions: 1248
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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