>gb|AY337026.1| Neopsylla biseta 16S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 545

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 75  ataaatacagcctatatttca 95
           |||||||||||||||||||||
Sbjct: 167 ataaatacagcctatatttca 147

>gb|AY542981.1| Bigelowiella natans dynein 8 kDa light chain mRNA, complete cds
          Length = 532

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 126 gtccaaggtaaaagtagatg 145
           ||||||||||||||||||||
Sbjct: 261 gtccaaggtaaaagtagatg 242

>gb|AC102784.8| Mus musculus chromosome 1, clone RP23-408B17, complete sequence
          Length = 195644

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    taaatacagcctatatttca 95
             ||||||||||||||||||||
Sbjct: 14691 taaatacagcctatatttca 14710

>emb|BX322573.4| Human DNA sequence from clone RP11-343N7 on chromosome X, complete
             sequence
          Length = 72675

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 136   aaagtagatggccaaaactgtgat 159
             ||||||| ||||||||||||||||
Sbjct: 69137 aaagtaggtggccaaaactgtgat 69160

>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16
          Length = 348580

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   accagatacgccaggcagaa 258
             ||||||||||||||||||||
Sbjct: 84288 accagatacgccaggcagaa 84307

>emb|CR376838.7| Zebrafish DNA sequence from clone DKEY-15F23 in linkage group 14,
              complete sequence
          Length = 256006

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     aaatacagcctatatttcac 96
              ||||||||||||||||||||
Sbjct: 160107 aaatacagcctatatttcac 160088

>gb|AF246898.1| Streptococcus pneumoniae serotype 6A capsular polysaccharide locus,
            partial sequence
          Length = 11480

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   tttgataatctcaactcctc 118
            ||||||||||||||||||||
Sbjct: 6685 tttgataatctcaactcctc 6704

>emb|BX511027.20| Zebrafish DNA sequence from clone CH211-281P14 in linkage group 14,
              complete sequence
          Length = 198761

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     aaatacagcctatatttcac 96
              ||||||||||||||||||||
Sbjct: 160800 aaatacagcctatatttcac 160781

>gb|AC016602.7| Homo sapiens chromosome 5 clone CTD-2061O12, complete sequence
          Length = 186265

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   aaaactgtgatgctccagcc 168
             ||||||||||||||||||||
Sbjct: 81891 aaaactgtgatgctccagcc 81910

>gb|AF316642.1|AF316642 Streptococcus pneumoniae serotype 18C capsular polysaccharide gene
             cluster, complete sequence
          Length = 21648

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    tttgataatctcaactcctc 118
             ||||||||||||||||||||
Sbjct: 16893 tttgataatctcaactcctc 16912

>gb|AF316640.1|AF316640 Streptococcus pneumoniae serotype 6B capsular polysaccharide gene
             cluster, complete sequence
          Length = 17160

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    tttgataatctcaactcctc 118
             ||||||||||||||||||||
Sbjct: 12707 tttgataatctcaactcctc 12726

>gb|AC154376.3| Mus musculus BAC clone RP23-71H16 from chromosome 13, complete sequence
          Length = 169417

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   gtagatggccaaaactgtga 158
             ||||||||||||||||||||
Sbjct: 74881 gtagatggccaaaactgtga 74862

>gb|AC008950.4|AC008950 Homo sapiens chromosome 5 clone CTD-2336H4, complete sequence
          Length = 111183

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   aaaactgtgatgctccagcc 168
             ||||||||||||||||||||
Sbjct: 48750 aaaactgtgatgctccagcc 48769

>emb|AL928997.8| Zebrafish DNA sequence from clone CH211-125O15 in linkage group 18,
             complete sequence
          Length = 169038

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tttaacagtttcatcgtaat 62
             ||||||||||||||||||||
Sbjct: 26856 tttaacagtttcatcgtaat 26837

>emb|CR931688.1| Streptococcus pneumoniae strain 24F L (serotype 24f)
          Length = 24165

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    tttgataatctcaactcctc 118
             ||||||||||||||||||||
Sbjct: 19339 tttgataatctcaactcctc 19358

>emb|CR931639.1| Streptococcus pneumoniae strain 2616/39 (serotype 6b)
          Length = 17506

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    tttgataatctcaactcctc 118
             ||||||||||||||||||||
Sbjct: 12680 tttgataatctcaactcctc 12699

>emb|CR931718.1| Streptococcus pneumoniae strain Eddy nr. 72 (serotype 45)
          Length = 27591

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    tttgataatctcaactcctc 118
             ||||||||||||||||||||
Sbjct: 22372 tttgataatctcaactcctc 22391

>emb|CR931673.1| Streptococcus pneumoniae strain 4593/40 (serotype 18c)
          Length = 21819

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    tttgataatctcaactcctc 118
             ||||||||||||||||||||
Sbjct: 16994 tttgataatctcaactcctc 17013

>emb|CR931672.1| Streptococcus pneumoniae strain 1033/41 (serotype 18b)
          Length = 21819

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    tttgataatctcaactcctc 118
             ||||||||||||||||||||
Sbjct: 16994 tttgataatctcaactcctc 17013

>emb|CR931671.1| Streptococcus pneumoniae strain 8609/43 (serotype 18a)
          Length = 21887

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    tttgataatctcaactcctc 118
             ||||||||||||||||||||
Sbjct: 16984 tttgataatctcaactcctc 17003

>gb|AC174458.2| Mus musculus BAC clone RP23-282D14 from chromosome 13, complete sequence
          Length = 205673

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    gtagatggccaaaactgtga 158
              ||||||||||||||||||||
Sbjct: 172544 gtagatggccaaaactgtga 172563


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,093,525
Number of Sequences: 3902068
Number of extensions: 2093525
Number of successful extensions: 34925
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34900
Number of HSP's gapped (non-prelim): 25
length of query: 286
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 264
effective length of database: 17,147,199,772
effective search space: 4526860739808
effective search space used: 4526860739808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)