ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet59e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PTPA2_DEBHA (Q6BU97) Serine/threonine-protein phosphatase 2A act... 28 8.3
2STAP1_HUMAN (Q9ULZ2) Signal-transducing adaptor protein 1 (STAP-... 28 8.3

>PTPA2_DEBHA (Q6BU97) Serine/threonine-protein phosphatase 2A activator 2 (EC|
           5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-2)
           (PPIase PTPA-2) (Rotamase PTPA-2) (Phosphotyrosyl
           phosphatase activator 2)
          Length = 367

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = -3

Query: 169 GTDGQWKLDDFEEA*LSQGSKQYKTSPPMDPYGLYYFCI---FF*YLCLVVCLHF 14
           G+ G W LDD+       GS Q  T P M P  ++   +   F+     + C+HF
Sbjct: 189 GSHGVWGLDDYHFLPFLFGSSQLATHPHMKPKLIHNEELVESFYKQYMYLECIHF 243



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>STAP1_HUMAN (Q9ULZ2) Signal-transducing adaptor protein 1 (STAP-1) (Stem cell|
           adaptor protein 1) (BCR downstream signaling protein 1)
           (Docking protein BRDG1)
          Length = 295

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
 Frame = +1

Query: 25  TQPNTSIKKKYKNS---IGRMDPLAAMFYTVSILDLTMLLQSH 144
           T+ +TS++K+ + +   +  ++P+ A FYTVS  + T +LQ +
Sbjct: 152 TEQSTSVEKEKEPTEDYVDVLNPMPACFYTVSRKEATEMLQKN 194


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,331,468
Number of Sequences: 219361
Number of extensions: 622513
Number of successful extensions: 1581
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 80,573,946
effective HSP length: 53
effective length of database: 68,947,813
effective search space used: 1654747512
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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