>gb|BT009450.1| Triticum aestivum clone wlmk8.pk0021.e3:fis, full insert mRNA
            sequence
          Length = 1587

 Score =  137 bits (69), Expect = 1e-29
 Identities = 78/81 (96%)
 Strand = Plus / Minus

                                                                        
Query: 75   gtcactccccgtagaagacgtcctggaagcagtgcaggtactggggctccagcgcgaaca 134
            ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 1355 gtcactccccgtagaagacgtcctggaagcactgcaggtactcgggctccagcgcgaaca 1296

                                 
Query: 135  gcacggcgatgccgtcgtccc 155
             ||||||||||||||||||||
Sbjct: 1295 acacggcgatgccgtcgtccc 1275

>gb|AY104442.1| Zea mays PCO096884 mRNA sequence
          Length = 1115

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 109 caggtactggggctccagcgcgaacagcacggcgatgccgtcgtccc 155
           |||||||| ||||||||| | ||  ||||||||||||||||||||||
Sbjct: 842 caggtactcgggctccagagagatgagcacggcgatgccgtcgtccc 796

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 51      cgaggaaggagggaaggcgatgtgg 75
               |||||||||||||||| ||||||||
Sbjct: 3341375 cgaggaaggagggaagacgatgtgg 3341399

>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05,
              complete sequence
          Length = 167317

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 51     cgaggaaggagggaaggcgatgtgg 75
              |||||||||||||||| ||||||||
Sbjct: 135199 cgaggaaggagggaagacgatgtgg 135223

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    acagcacggcgatgccgtcg 151
              ||||||||||||||||||||
Sbjct: 548880 acagcacggcgatgccgtcg 548899



 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 124    cagcgcgaacagcacggcg 142
              |||||||||||||||||||
Sbjct: 837502 cagcgcgaacagcacggcg 837484

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 124     cagcgcgaacagcacggcga 143
               ||||||||||||||||||||
Sbjct: 4585316 cagcgcgaacagcacggcga 4585297

>gb|BC042584.1| Mus musculus, Similar to glucosamine (N-acetyl)-6-sulfatase
            (Sanfilippo disease IIID), clone IMAGE:5355468, mRNA
          Length = 4029

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   acacgaggaaggagggaagg 67
            ||||||||||||||||||||
Sbjct: 3456 acacgaggaaggagggaagg 3437

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 133     cagcacggcgatgccgtcgt 152
               ||||||||||||||||||||
Sbjct: 3539754 cagcacggcgatgccgtcgt 3539773

>gb|AF021840.1|AF021840 Ralstonia solanacearum AidA (aidA), SolR (solR), and SolI (solI)
           genes, complete cds
          Length = 4123

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 133 cagcacggcgatgccgtcgt 152
           ||||||||||||||||||||
Sbjct: 230 cagcacggcgatgccgtcgt 211

>gb|AC140264.2| Mus musculus BAC clone RP23-316F10 from 10, complete sequence
          Length = 176292

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     acacgaggaaggagggaagg 67
              ||||||||||||||||||||
Sbjct: 103456 acacgaggaaggagggaagg 103475

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 126     gcgcgaacagcacggcgat 144
               |||||||||||||||||||
Sbjct: 1282285 gcgcgaacagcacggcgat 1282303

>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 99    ggaagcagtgcaggtactg 117
             |||||||||||||||||||
Sbjct: 11175 ggaagcagtgcaggtactg 11157

>emb|AL590233.23| Human DNA sequence from clone RP13-93L13 on chromosome 9 Contains a
             ubiquitin-conjugating enzyme E2 pseudogene, a
             proliferation-associated 2G4, 38kDa (PA2G4) pseuodgene,
             the 5' end of the SEMA4D gene for sema domain,
             immunoglobulin domain (Ig), transmembrane domain (TM) and
             short cytoplasmic domain, (semaphorin) 4D and a CpG
             island, complete sequence
          Length = 109008

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 58    ggagggaaggcgatgtggtcact 80
             |||||||||||| ||||||||||
Sbjct: 62123 ggagggaaggcgttgtggtcact 62145

>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 123     ccagcgcgaacagcacggc 141
               |||||||||||||||||||
Sbjct: 2003031 ccagcgcgaacagcacggc 2003013

>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 108     gcaggtactggggctccagcgcg 130
               |||||||||| ||||||||||||
Sbjct: 4361166 gcaggtactgcggctccagcgcg 4361144

>emb|AL832610.2|HSM803920 Homo sapiens genomic DNA; cDNA DKFZp451J0117 (from clone
            DKFZp451J0117)
          Length = 4944

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 58   ggagggaaggcgatgtggtcact 80
            |||||||||||| ||||||||||
Sbjct: 3654 ggagggaaggcgttgtggtcact 3676

>gb|AE012157.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 65 of
            460 of the complete genome
          Length = 12504

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 125  agcgcgaacagcacggcga 143
            |||||||||||||||||||
Sbjct: 9361 agcgcgaacagcacggcga 9379

>gb|AF204145.1| Xanthomonas campestris pv. campestris LPS biosynthetic cluster, partial
             sequence; and putative electron-transferring flavoprotein
             beta subunit (etfS) and putative electron-transferring
             flavoprotein alpha subunit (etfL) genes, complete cds
          Length = 37753

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 125   agcgcgaacagcacggcga 143
             |||||||||||||||||||
Sbjct: 30289 agcgcgaacagcacggcga 30271

>gb|AF289567.1|AF289567 Homo sapiens clone pp6489 unknown mRNA
          Length = 2571

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 58   ggagggaaggcgatgtggtcact 80
            |||||||||||| ||||||||||
Sbjct: 1272 ggagggaaggcgttgtggtcact 1294

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 133    cagcacggcgatgccgtcg 151
              |||||||||||||||||||
Sbjct: 454790 cagcacggcgatgccgtcg 454772

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 129     cgaacagcacggcgatgcc 147
               |||||||||||||||||||
Sbjct: 2663180 cgaacagcacggcgatgcc 2663198

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 125     agcgcgaacagcacggcga 143
               |||||||||||||||||||
Sbjct: 4318936 agcgcgaacagcacggcga 4318918

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 121      ctccagcgcgaacagcacg 139
                |||||||||||||||||||
Sbjct: 14534082 ctccagcgcgaacagcacg 14534100

>gb|AC114603.15| Mus musculus chromosome 1, clone RP23-355E19, complete sequence
          Length = 260698

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 52     gaggaaggagggaaggcga 70
              |||||||||||||||||||
Sbjct: 226218 gaggaaggagggaaggcga 226200

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 133     cagcacggcgatgccgtcg 151
               |||||||||||||||||||
Sbjct: 4437258 cagcacggcgatgccgtcg 4437240

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 134     agcacggcgatgccgtcgt 152
               |||||||||||||||||||
Sbjct: 3124540 agcacggcgatgccgtcgt 3124558

>dbj|AK106430.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-C03, full
           insert sequence
          Length = 2680

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 121 ctccagcgcgaacagcacg 139
           |||||||||||||||||||
Sbjct: 902 ctccagcgcgaacagcacg 884

>dbj|AK101523.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046O16, full
           insert sequence
          Length = 2683

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 121 ctccagcgcgaacagcacg 139
           |||||||||||||||||||
Sbjct: 905 ctccagcgcgaacagcacg 887

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 130    gaacagcacggcgatgccg 148
              |||||||||||||||||||
Sbjct: 710557 gaacagcacggcgatgccg 710575

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 121      ctccagcgcgaacagcacg 139
                |||||||||||||||||||
Sbjct: 14488366 ctccagcgcgaacagcacg 14488384

>emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa0040E18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 158261

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 121    ctccagcgcgaacagcacg 139
              |||||||||||||||||||
Sbjct: 127211 ctccagcgcgaacagcacg 127193

>emb|AL807242.7| Mouse DNA sequence from clone RP23-152G19 on chromosome 4, complete
             sequence
          Length = 213746

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 54    ggaaggagggaaggcgatg 72
             |||||||||||||||||||
Sbjct: 42365 ggaaggagggaaggcgatg 42383


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 925,552
Number of Sequences: 3902068
Number of extensions: 925552
Number of successful extensions: 78704
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77606
Number of HSP's gapped (non-prelim): 1098
length of query: 155
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 133
effective length of database: 17,147,199,772
effective search space: 2280577569676
effective search space used: 2280577569676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)