| Clone Name | rbaet59a07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 452 bits (228), Expect = e-124 Identities = 234/236 (99%) Strand = Plus / Minus Query: 1 gaagaacagaacgagatgagacatatattacacacgatctgaacgtgacaaggagcaaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1155 gaagaacagaacgagatgagacatatattacacacgatctgaacgtgacaaggagcaaac 1096 Query: 61 agaagaatctaccacccgctccatttcacattatcccccctcactggtccttatttatca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1095 agaagaatctaccacccgctccatttcacattatcccccctcactggtccttatttatca 1036 Query: 121 tacagtacaatacagacgcccccatcttccctatccccggccgtcttcctccggcgatcg 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1035 tacagtacaatacagacgcccccatcttccctatctccggccgtcttcctccggcgatcg 976 Query: 181 acgtatacacggacgatccaatgctaccttgcttttgatggacggggactacatgg 236 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 975 acgtatacacggacggtccaatgctaccttgcttttgatggacggggactacatgg 920
>gb|BC090193.1| Xenopus laevis cDNA clone MGC:85054 IMAGE:6327047, complete cds Length = 1785 Score = 42.1 bits (21), Expect = 0.77 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 tggtccttatttatcatacag 125 ||||||||||||||||||||| Sbjct: 1462 tggtccttatttatcatacag 1442
>emb|AL590111.14| Human DNA sequence from clone RP11-570F3 on chromosome 10 Contains part of a novel gene (FLJ30499) and the 3' end of a novel gene (FLJ30450), complete sequence Length = 41069 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcactggtccttatttatc 119 |||||||||||||||||||| Sbjct: 3262 ctcactggtccttatttatc 3243
>emb|BX571768.19| Zebrafish DNA sequence from clone DKEYP-2C4 in linkage group 11, complete sequence Length = 111222 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 tatttatcatacagtacaat 131 |||||||||||||||||||| Sbjct: 36635 tatttatcatacagtacaat 36616
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 cccggccgtcttcctccggc 175 |||||||||||||||||||| Sbjct: 951280 cccggccgtcttcctccggc 951261 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,757,084 Number of Sequences: 3902068 Number of extensions: 1757084 Number of successful extensions: 29385 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 29372 Number of HSP's gapped (non-prelim): 13 length of query: 236 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 214 effective length of database: 17,147,199,772 effective search space: 3669500751208 effective search space used: 3669500751208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)