ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet58g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FAF_DROME (P55824) Probable ubiquitin carboxyl-terminal hydrolas... 28 9.2
2OR6N2_HUMAN (Q8NGY6) Olfactory receptor 6N2 28 9.2

>FAF_DROME (P55824) Probable ubiquitin carboxyl-terminal hydrolase FAF (EC|
           3.1.2.15) (Ubiquitin thioesterase FAF) (Ubiquitin
           specific-processing protease FAF) (Deubiquitinating
           enzyme FAF) (Protein fat facets)
          Length = 2778

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 98  WLCARTVRACWNCTTTSALRPATFVMC 18
           WLCA   +  W+C   +A+ PA    C
Sbjct: 747 WLCADQAKQIWHCLAVNAVFPADREEC 773



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>OR6N2_HUMAN (Q8NGY6) Olfactory receptor 6N2|
          Length = 317

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 125 IHWLITLPRWLCARTVRACWNC 60
           +H+ I +   LCA+   ACW C
Sbjct: 130 LHYPIIMTTTLCAKMAAACWTC 151


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,517,610
Number of Sequences: 219361
Number of extensions: 244980
Number of successful extensions: 854
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 80,573,946
effective HSP length: 19
effective length of database: 76,406,087
effective search space used: 1833746088
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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