| Clone Name | rbaet58f11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold Length = 1743090 Score = 46.1 bits (23), Expect = 0.056 Identities = 23/23 (100%) Strand = Plus / Minus Query: 108 gataggaagagaaaaacataaaa 130 ||||||||||||||||||||||| Sbjct: 241725 gataggaagagaaaaacataaaa 241703
>gb|AC146534.3| Otolemur garnettii clone CH256-50E17, complete sequence Length = 139631 Score = 46.1 bits (23), Expect = 0.056 Identities = 23/23 (100%) Strand = Plus / Minus Query: 108 gataggaagagaaaaacataaaa 130 ||||||||||||||||||||||| Sbjct: 52219 gataggaagagaaaaacataaaa 52197
>gb|AC074182.6| Homo sapiens BAC clone RP11-553G13 from 2, complete sequence Length = 190436 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 atgaagataggaagagaaaaa 123 ||||||||||||||||||||| Sbjct: 189742 atgaagataggaagagaaaaa 189722
>gb|AC129583.15| Mus musculus chromosome 15, clone RP23-197P10, complete sequence Length = 206094 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 aagataggaagagaaaaaca 125 |||||||||||||||||||| Sbjct: 73988 aagataggaagagaaaaaca 74007
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 40.1 bits (20), Expect = 3.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 104 tgaagataggaagagaaaaacataaaat 131 |||| ||||||| ||||||||||||||| Sbjct: 94066 tgaacataggaatagaaaaacataaaat 94039
>gb|AC147078.2| Pan troglodytes BAC clone RP43-180L22 from 7, complete sequence Length = 217576 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 taggaagagaaaaacataaa 129 |||||||||||||||||||| Sbjct: 183507 taggaagagaaaaacataaa 183488
>ref|XM_452650.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C10120g predicted mRNA Length = 1281 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 agataggaagagaaaaacat 126 |||||||||||||||||||| Sbjct: 408 agataggaagagaaaaacat 427
>gb|AC034148.9| Homo sapiens BAC clone RP11-155B1 from 7, complete sequence Length = 170928 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 taggaagagaaaaacataaa 129 |||||||||||||||||||| Sbjct: 40226 taggaagagaaaaacataaa 40207
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1753957 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 agataggaagagaaaaacat 126 |||||||||||||||||||| Sbjct: 872842 agataggaagagaaaaacat 872861
>gb|AC107614.3| Homo sapiens 3 BAC RP11-719A7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160917 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 taggaagagaaaaacataaa 129 |||||||||||||||||||| Sbjct: 120652 taggaagagaaaaacataaa 120633
>gb|AC078922.14| Homo sapiens 12q BAC RP11-611E13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181000 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 aggaagagaaaaacataaaa 130 |||||||||||||||||||| Sbjct: 33812 aggaagagaaaaacataaaa 33793
>gb|AC025159.28| Homo sapiens 12 BAC RP11-1082K22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 209961 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 aggaagagaaaaacataaaa 130 |||||||||||||||||||| Sbjct: 65135 aggaagagaaaaacataaaa 65154
>gb|AC008490.6| Homo sapiens chromosome 5 clone CTC-426I14, complete sequence Length = 113213 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 aggaagagaaaaacataaaa 130 |||||||||||||||||||| Sbjct: 51936 aggaagagaaaaacataaaa 51955
>gb|AC008513.7|AC008513 Homo sapiens chromosome 5 clone CTC-455C23, complete sequence Length = 224058 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 aggaagagaaaaacataaaa 130 |||||||||||||||||||| Sbjct: 63614 aggaagagaaaaacataaaa 63595
>gb|AC017092.4|AC017092 Homo sapiens BAC clone RP11-510D22 from 5, complete sequence Length = 180072 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 aggaagagaaaaacataaaa 130 |||||||||||||||||||| Sbjct: 74178 aggaagagaaaaacataaaa 74197
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aagagaaaaacataaaatcc 133 |||||||||||||||||||| Sbjct: 17971030 aagagaaaaacataaaatcc 17971049
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 104 tgaagataggaagagaaaaacataaaat 131 |||| ||||||| ||||||||||||||| Sbjct: 26449375 tgaacataggaatagaaaaacataaaat 26449348
>gb|AC024942.18|AC024942 Homo sapiens 12 BAC RP11-1115M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146120 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 aggaagagaaaaacataaaa 130 |||||||||||||||||||| Sbjct: 46216 aggaagagaaaaacataaaa 46235
>gb|AC005491.1|AC005491 Homo sapiens clone g1564a016 from 7p14-15, complete sequence Length = 38569 Score = 40.1 bits (20), Expect = 3.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 99 caccatgaagataggaagagaaaaacat 126 ||||||||||||||||| |||||||||| Sbjct: 3382 caccatgaagataggaa-agaaaaacat 3356
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aagagaaaaacataaaatcc 133 |||||||||||||||||||| Sbjct: 17897349 aagagaaaaacataaaatcc 17897368
>emb|AL831798.3|CNS08CAB Oryza sativa chromosome 12, . BAC OSJNBb0031E19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124294 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 aagagaaaaacataaaatcc 133 |||||||||||||||||||| Sbjct: 114662 aagagaaaaacataaaatcc 114643
>emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa0041B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147543 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 aagagaaaaacataaaatcc 133 |||||||||||||||||||| Sbjct: 27526 aagagaaaaacataaaatcc 27507 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,966,238 Number of Sequences: 3902068 Number of extensions: 1966238 Number of successful extensions: 36740 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 36672 Number of HSP's gapped (non-prelim): 69 length of query: 268 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 246 effective length of database: 17,147,199,772 effective search space: 4218211143912 effective search space used: 4218211143912 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)