ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet58f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for sucros... 208 3e-51
2dbj|AB029888.1| Triticum aestivum 1-SST mRNA for sucrose:sucrose... 66 3e-08
3emb|AL603711.6| Mouse DNA sequence from clone RP23-381B19 on chr... 42 0.37
4gb|AC011118.13| Homo sapiens chromosome 8, clone RP11-163D8, com... 42 0.37
5emb|AL713883.1|CNS07YP0 Mus musculus chromosome 11 region in the... 42 0.37
6gb|AC159273.4| Mus musculus BAC clone RP23-391G8 from chromosome... 40 1.5
7gb|DP000017.1| Sus scrofa target 1 genomic scaffold 40 1.5
8gb|AC092497.2| Sus scrofa clone RP44-30C22, complete sequence 40 1.5
9gb|AC125010.6| Mus musculus chromosome 10, clone RP24-117L12, co... 40 1.5
10gb|AC146257.3| Pan troglodytes BAC clone CH251-113A6 from Y, com... 40 1.5
11emb|AL645570.13| Mouse DNA sequence from clone RP23-377H12 on ch... 40 1.5
12dbj|BS000583.2| Pan troglodytes chromosome Y clone:PTB-614F22, c... 40 1.5
13dbj|BS000631.2| Pan troglodytes chromosome Y clone: PTB-395F06, ... 40 1.5
14dbj|BS000652.2| Pan troglodytes chromosome Y clone: PTBY-013L08,... 40 1.5
15gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 1.5
16gb|AC068061.6| Homo sapiens chromosome 10 clone RP11-444F4, comp... 40 1.5
17dbj|AK089862.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 1.5
18gb|AC093469.11| Mus musculus chromosome 7, clone RP23-21I4, comp... 40 1.5
19gb|AC093393.3| Homo sapiens BAC clone RP11-816B18 from 2, comple... 40 1.5
20gb|AC006999.2|AC006999 Homo sapiens BAC clone RP11-462A19 from Y... 40 1.5
21emb|AL355075.6|CNS05TC9 Human chromosome 14 DNA sequence BAC R-2... 40 1.5
22emb|AL163195.5|CNS01RIH Human chromosome 14 DNA sequence BAC R-1... 40 1.5
23gb|AC152884.1| Pan troglodytes chromosome 17 clone RP43-O52L01 m... 38 5.8
24gb|AC114678.20| Mus musculus chromosome 10, clone RP24-213L12, c... 38 5.8
25gb|AC132902.9| Mus musculus chromosome 13, clone RP24-286O14, co... 38 5.8
26gb|AE006059.1| Pasteurella multocida subsp. multocida str. Pm70 ... 38 5.8
27gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome... 38 5.8
28gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome... 38 5.8
29gb|AC167719.2| Mus musculus BAC clone RP24-285I8 from chromosome... 38 5.8
30emb|AL023794.2|SPCC70 S.pombe chromosome III cosmid c70 38 5.8
31gb|AC092323.3| Homo sapiens chromosome 16 clone RP11-133B5, comp... 38 5.8
32gb|AC021491.16| Homo sapiens chromosome 17, clone RP11-94C24, co... 38 5.8
33gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, comple... 38 5.8
34gb|AC090824.6| Homo sapiens chromosome 17, clone CTD-2532B14, co... 38 5.8
35ref|NM_027900.3| Mus musculus R3H domain containing 2 (R3hdm2), ... 38 5.8
36gb|AC145069.9| Mus musculus chromosome 3, clone RP23-82B2, compl... 38 5.8
37gb|AC159898.2| Mus musculus BAC clone RP23-254N11 from chromosom... 38 5.8
38gb|AC162378.2| Mus musculus BAC clone RP24-82K1 from chromosome ... 38 5.8
39gb|AC160061.6| Mus musculus 10 BAC RP24-496L10 (Roswell Park Can... 38 5.8
40dbj|AK043545.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 38 5.8
41dbj|AB088409.1| Triticum aestivum 1-FFT-A mRNA for fructan:fruct... 38 5.8
42dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
43dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
44gb|AC012073.9| Homo sapiens BAC clone RP11-443B20 from 2, comple... 38 5.8
45gb|AC092131.5| Homo sapiens chromosome 16 clone RP11-164F14, com... 38 5.8
46dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
47emb|AL672031.10| Mouse DNA sequence from clone RP23-433D6 on chr... 38 5.8
48emb|AM116858.1| Typha angustifolia plastid rps16 gene, intron 1,... 38 5.8
49gb|AC005951.1|AC005951 Homo sapiens chromosome 17, clone hRPK.37... 38 5.8
50gb|AC132105.3| Mus musculus BAC clone RP24-224B9 from 16, comple... 38 5.8
51gb|AC004590.1|AC004590 Homo sapiens chromosome 17, clone hCIT.22... 38 5.8
52gb|AC140789.2| Gallus gallus BAC clone TAM31-90N23 from chromoso... 38 5.8
53emb|AL672038.7| Mouse DNA sequence from clone RP23-317H19 on chr... 38 5.8
54emb|AL844500.1|CNS08CAS Mus musculus chromosome 11 region in the... 38 5.8 
>emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for
            sucrose-sucrose-1-fructosyltransferase (1-sst gene)
          Length = 2157

 Score =  208 bits (105), Expect = 3e-51
 Identities = 114/117 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttcatcttaattactaaatcaaactccagagaaggaagaacaaaaatggactgataggca 60
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2064 ttcatcttaattactaaatcaaactcaagagaaggaagaacaaaaatggactgataggca 2005

                                                                     
Query: 61   gagtcgatagtactccatttcatgtgtctaggagaaagggagccaccgaccgagcaa 117
            ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 2004 gagtcgatagtactccatcacatgtgtctaggagaaagggagccaccgaccgagcaa 1948
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>dbj|AB029888.1| Triticum aestivum 1-SST mRNA for sucrose:sucrose
            1-fructosytransferase, complete cds
          Length = 2330

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 30   agaaggaagaacaaaaatggactgataggcagagtcgatagtactccat 78
            |||| |||||||||||||| | ||||||||||||||| |||||||||||
Sbjct: 2166 agaacgaagaacaaaaatgaagtgataggcagagtcgctagtactccat 2118
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>emb|AL603711.6| Mouse DNA sequence from clone RP23-381B19 on chromosome 11 Contains the
              3' end of the Slfn3 gene for schlafen 3, a novel gene, two
              schlafen (Slfn) pseudogenes, the Pex12 gene for peroxisomal
              biogenesis factor 12 and the Ap2b1 gene for adaptor-related
              protein complex 2 beta 1 subunit, complete sequence
          Length = 204523

 Score = 42.1 bits (21), Expect = 0.37
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     ccagagaaggaagaacaaaaa 46
              |||||||||||||||||||||
Sbjct: 165059 ccagagaaggaagaacaaaaa 165079



 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 26     ccagagaaggaagaacaaa 44
              |||||||||||||||||||
Sbjct: 201583 ccagagaaggaagaacaaa 201601
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>gb|AC011118.13| Homo sapiens chromosome 8, clone RP11-163D8, complete sequence
          Length = 135968

 Score = 42.1 bits (21), Expect = 0.37
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    agaaggaagaacaaaaatgga 50
             |||||||||||||||||||||
Sbjct: 71248 agaaggaagaacaaaaatgga 71228
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>emb|AL713883.1|CNS07YP0 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6)
             clone 179H3 of library Caltech CITB-BAC from chromosome 11
             of Mus musculus (mouse)
          Length = 168835

 Score = 42.1 bits (21), Expect = 0.37
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    ccagagaaggaagaacaaaaa 46
             |||||||||||||||||||||
Sbjct: 44489 ccagagaaggaagaacaaaaa 44469



 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 26   ccagagaaggaagaacaaa 44
            |||||||||||||||||||
Sbjct: 7965 ccagagaaggaagaacaaa 7947
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>gb|AC159273.4| Mus musculus BAC clone RP23-391G8 from chromosome 7, complete sequence
          Length = 227709

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    ctccagagaaggaagaacaa 43
             ||||||||||||||||||||
Sbjct: 30575 ctccagagaaggaagaacaa 30556
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>gb|DP000017.1| Sus scrofa target 1 genomic scaffold
          Length = 1471440

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 18      atcaaactccagagaaggaa 37
               ||||||||||||||||||||
Sbjct: 1316863 atcaaactccagagaaggaa 1316844
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>gb|AC092497.2| Sus scrofa clone RP44-30C22, complete sequence
          Length = 172144

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    atcaaactccagagaaggaa 37
             ||||||||||||||||||||
Sbjct: 17567 atcaaactccagagaaggaa 17548
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>gb|AC125010.6| Mus musculus chromosome 10, clone RP24-117L12, complete sequence
          Length = 223541

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     ccagagaaggaagaacaaaa 45
              ||||||||||||||||||||
Sbjct: 149436 ccagagaaggaagaacaaaa 149417
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>gb|AC146257.3| Pan troglodytes BAC clone CH251-113A6 from Y, complete sequence
          Length = 174522

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   ctccagagaaggaagaacaa 43
            ||||||||||||||||||||
Sbjct: 2902 ctccagagaaggaagaacaa 2883
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>emb|AL645570.13| Mouse DNA sequence from clone RP23-377H12 on chromosome 11 Contains two
             novel genes, the 3' end of the Meis1 gene for myeloid
             ecotropic viral integration site 1 and two CpG islands,
             complete sequence
          Length = 190198

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    aggagaaagggagccaccga 109
             ||||||||||||||||||||
Sbjct: 61333 aggagaaagggagccaccga 61314
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>dbj|BS000583.2| Pan troglodytes chromosome Y clone:PTB-614F22, complete sequence
          Length = 158476

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     ctccagagaaggaagaacaa 43
              ||||||||||||||||||||
Sbjct: 142994 ctccagagaaggaagaacaa 143013
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>dbj|BS000631.2| Pan troglodytes chromosome Y clone: PTB-395F06, complete sequence
          Length = 123227

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    ctccagagaaggaagaacaa 43
             ||||||||||||||||||||
Sbjct: 24235 ctccagagaaggaagaacaa 24254
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>dbj|BS000652.2| Pan troglodytes chromosome Y clone: PTBY-013L08, complete sequence
          Length = 134024

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    ctccagagaaggaagaacaa 43
             ||||||||||||||||||||
Sbjct: 16249 ctccagagaaggaagaacaa 16268
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 24       ctccagagaaggaagaacaa 43
                ||||||||||||||||||||
Sbjct: 16828990 ctccagagaaggaagaacaa 16828971
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>gb|AC068061.6| Homo sapiens chromosome 10 clone RP11-444F4, complete sequence
          Length = 190007

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     tactccatttcatgtgtcta 90
              ||||||||||||||||||||
Sbjct: 143921 tactccatttcatgtgtcta 143940
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>dbj|AK089862.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830034E14 product:unclassifiable, full
           insert sequence
          Length = 3015

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  ccagagaaggaagaacaaaa 45
           ||||||||||||||||||||
Sbjct: 674 ccagagaaggaagaacaaaa 693
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>gb|AC093469.11| Mus musculus chromosome 7, clone RP23-21I4, complete sequence
          Length = 215022

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     ctccagagaaggaagaacaa 43
              ||||||||||||||||||||
Sbjct: 187477 ctccagagaaggaagaacaa 187458
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>gb|AC093393.3| Homo sapiens BAC clone RP11-816B18 from 2, complete sequence
          Length = 120450

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    tccagagaaggaagaacaaa 44
             ||||||||||||||||||||
Sbjct: 50522 tccagagaaggaagaacaaa 50503
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>gb|AC006999.2|AC006999 Homo sapiens BAC clone RP11-462A19 from Y, complete sequence
          Length = 112878

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    ctccagagaaggaagaacaa 43
             ||||||||||||||||||||
Sbjct: 27959 ctccagagaaggaagaacaa 27978
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>emb|AL355075.6|CNS05TC9 Human chromosome 14 DNA sequence BAC R-203M5 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 204654

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    caaaaatggactgataggca 60
             ||||||||||||||||||||
Sbjct: 29590 caaaaatggactgataggca 29609
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>emb|AL163195.5|CNS01RIH Human chromosome 14 DNA sequence BAC R-14J7 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 162209

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     caaaaatggactgataggca 60
              ||||||||||||||||||||
Sbjct: 144357 caaaaatggactgataggca 144376
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>gb|AC152884.1| Pan troglodytes chromosome 17 clone RP43-O52L01 map human ortholog
             17q21.33, complete sequence
          Length = 162327

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    tcaaactccagagaaggaa 37
             |||||||||||||||||||
Sbjct: 62536 tcaaactccagagaaggaa 62554
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>gb|AC114678.20| Mus musculus chromosome 10, clone RP24-213L12, complete sequence
          Length = 180079

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 28    agagaaggaagaacaaaaatgga 50
             ||||||||||||| |||||||||
Sbjct: 36262 agagaaggaagaagaaaaatgga 36240
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>gb|AC132902.9| Mus musculus chromosome 13, clone RP24-286O14, complete sequence
          Length = 160759

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     ttcatcttaattactaaat 19
             |||||||||||||||||||
Sbjct: 52005 ttcatcttaattactaaat 52023
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>gb|AE006059.1| Pasteurella multocida subsp. multocida str. Pm70 section 26 of 204 of
            the complete genome
          Length = 9671

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 32   aaggaagaacaaaaatgga 50
            |||||||||||||||||||
Sbjct: 5867 aaggaagaacaaaaatgga 5849
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>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0074P11, complete sequence
          Length = 148753

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 34   ggaagaacaaaaatggactgataggca 60
            |||| |||||||||||| |||||||||
Sbjct: 5932 ggaaaaacaaaaatggagtgataggca 5906
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>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08,
             complete sequence
          Length = 94286

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 34    ggaagaacaaaaatggactgataggca 60
             |||| |||||||||||| |||||||||
Sbjct: 79239 ggaaaaacaaaaatggagtgataggca 79213
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>gb|AC167719.2| Mus musculus BAC clone RP24-285I8 from chromosome 10, complete sequence
          Length = 180573

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 28    agagaaggaagaacaaaaatgga 50
             ||||||||||||| |||||||||
Sbjct: 37779 agagaaggaagaagaaaaatgga 37801
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>emb|AL023794.2|SPCC70 S.pombe chromosome III cosmid c70
          Length = 27999

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 5    tcttaattactaaatcaaa 23
            |||||||||||||||||||
Sbjct: 9924 tcttaattactaaatcaaa 9942
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>gb|AC092323.3| Homo sapiens chromosome 16 clone RP11-133B5, complete sequence
          Length = 173189

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    acaaaaatggactgatagg 58
             |||||||||||||||||||
Sbjct: 84654 acaaaaatggactgatagg 84636
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>gb|AC021491.16| Homo sapiens chromosome 17, clone RP11-94C24, complete sequence
          Length = 175262

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    tcaaactccagagaaggaa 37
             |||||||||||||||||||
Sbjct: 75323 tcaaactccagagaaggaa 75305
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>gb|AC021106.6| Homo sapiens BAC clone RP11-177C12 from 4, complete sequence
          Length = 195108

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    tccagagaaggaagaacaa 43
             |||||||||||||||||||
Sbjct: 45821 tccagagaaggaagaacaa 45839
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>gb|AC090824.6| Homo sapiens chromosome 17, clone CTD-2532B14, complete sequence
          Length = 187161

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 5      tcttaattactaaatcaaactcc 27
              ||||||||||||| |||||||||
Sbjct: 132445 tcttaattactaactcaaactcc 132467
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>ref|NM_027900.3| Mus musculus R3H domain containing 2 (R3hdm2), mRNA
          Length = 4206

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 28  agagaaggaagaacaaaaatgga 50
           ||||||||||||| |||||||||
Sbjct: 322 agagaaggaagaagaaaaatgga 344
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>gb|AC145069.9| Mus musculus chromosome 3, clone RP23-82B2, complete sequence
          Length = 134162

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 31    gaaggaagaacaaaaatgg 49
             |||||||||||||||||||
Sbjct: 89268 gaaggaagaacaaaaatgg 89286
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>gb|AC159898.2| Mus musculus BAC clone RP23-254N11 from chromosome 16, complete
             sequence
          Length = 191677

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                            
Query: 16    aaatcaaactccaga-gaaggaagaacaaaa 45
             |||| |||||||||| |||||||||||||||
Sbjct: 30186 aaatgaaactccagaagaaggaagaacaaaa 30216
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>gb|AC162378.2| Mus musculus BAC clone RP24-82K1 from chromosome 16, complete sequence
          Length = 210112

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Minus

                                            
Query: 16    aaatcaaactccaga-gaaggaagaacaaaa 45
             |||| |||||||||| |||||||||||||||
Sbjct: 18368 aaatgaaactccagaagaaggaagaacaaaa 18338
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>gb|AC160061.6| Mus musculus 10 BAC RP24-496L10 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 174662

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    agagaaggaagaacaaaaa 46
             |||||||||||||||||||
Sbjct: 67371 agagaaggaagaacaaaaa 67353
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>dbj|AK043545.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830007C13 product:Hypothetical
           R3H domain/serine-rich region/glutamine-rich region
           containing protein, full insert sequence
          Length = 4177

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 28  agagaaggaagaacaaaaatgga 50
           ||||||||||||| |||||||||
Sbjct: 323 agagaaggaagaagaaaaatgga 345
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>dbj|AB088409.1| Triticum aestivum 1-FFT-A mRNA for fructan:fructan
            1-fructosyltransferase, complete cds
          Length = 2304

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 95   aaagggagccaccgaccgagcaa 117
            ||||| |||||||||||||||||
Sbjct: 2087 aaaggaagccaccgaccgagcaa 2065
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 34      ggaagaacaaaaatggactgataggca 60
               |||| |||||||||||| |||||||||
Sbjct: 6774978 ggaaaaacaaaaatggagtgataggca 6774952
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 36       aagaacaaaaatggactga 54
                |||||||||||||||||||
Sbjct: 19469608 aagaacaaaaatggactga 19469626
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>gb|AC012073.9| Homo sapiens BAC clone RP11-443B20 from 2, complete sequence
          Length = 153792

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     ttaattactaaatcaaact 25
             |||||||||||||||||||
Sbjct: 10821 ttaattactaaatcaaact 10803
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>gb|AC092131.5| Homo sapiens chromosome 16 clone RP11-164F14, complete sequence
          Length = 168624

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 40     acaaaaatggactgatagg 58
              |||||||||||||||||||
Sbjct: 109272 acaaaaatggactgatagg 109254
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>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0476H10
          Length = 151703

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    aagaacaaaaatggactga 54
             |||||||||||||||||||
Sbjct: 87135 aagaacaaaaatggactga 87153
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>emb|AL672031.10| Mouse DNA sequence from clone RP23-433D6 on chromosome X, complete
              sequence
          Length = 183828

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 1      ttcatcttaattactaaatcaaa 23
              |||||||||||||| ||||||||
Sbjct: 145420 ttcatcttaattaccaaatcaaa 145398
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>emb|AM116858.1| Typha angustifolia plastid rps16 gene, intron 1, specimen voucher
           Asmussen 107 (CP)
          Length = 794

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 32  aaggaagaacaaaaatggactga 54
           ||||||||||||||| |||||||
Sbjct: 639 aaggaagaacaaaaaaggactga 661
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>gb|AC005951.1|AC005951 Homo sapiens chromosome 17, clone hRPK.372_K_20, complete sequence
          Length = 155450

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 5      tcttaattactaaatcaaactcc 27
              ||||||||||||| |||||||||
Sbjct: 139618 tcttaattactaactcaaactcc 139596
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>gb|AC132105.3| Mus musculus BAC clone RP24-224B9 from 16, complete sequence
          Length = 160757

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                             
Query: 16     aaatcaaactccaga-gaaggaagaacaaaa 45
              |||| |||||||||| |||||||||||||||
Sbjct: 116887 aaatgaaactccagaagaaggaagaacaaaa 116917
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>gb|AC004590.1|AC004590 Homo sapiens chromosome 17, clone hCIT.22_K_21, complete sequence
          Length = 135259

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 19  tcaaactccagagaaggaa 37
           |||||||||||||||||||
Sbjct: 823 tcaaactccagagaaggaa 841
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>gb|AC140789.2| Gallus gallus BAC clone TAM31-90N23 from chromosome ul, complete
            sequence
          Length = 92928

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 19   tcaaactccagagaaggaa 37
            |||||||||||||||||||
Sbjct: 9948 tcaaactccagagaaggaa 9930
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>emb|AL672038.7| Mouse DNA sequence from clone RP23-317H19 on chromosome X, complete
            sequence
          Length = 181127

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 26   ccagagaaggaagaacaaa 44
            |||||||||||||||||||
Sbjct: 2549 ccagagaaggaagaacaaa 2531
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>emb|AL844500.1|CNS08CAS Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6)
              clone 85K17 of library RPCI-23 from chromosome 11 of strain
              C57Bl/6 of Mus musculus (mouse)
          Length = 234746

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     ccagagaaggaagaacaaa 44
              |||||||||||||||||||
Sbjct: 217342 ccagagaaggaagaacaaa 217324


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,547,722
Number of Sequences: 3902068
Number of extensions: 1547722
Number of successful extensions: 117673
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 117424
Number of HSP's gapped (non-prelim): 252
length of query: 124
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 103
effective length of database: 17,151,101,840
effective search space: 1766563489520
effective search space used: 1766563489520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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