ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet58a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YKH6_YEAST (P36082) Hypothetical 15.2 kDa protein in SMY1-MUD2 i... 28 7.0

>YKH6_YEAST (P36082) Hypothetical 15.2 kDa protein in SMY1-MUD2 intergenic|
           region
          Length = 127

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 12/26 (46%), Positives = 21/26 (80%)
 Frame = -1

Query: 117 FNFLPYKIIMHTLFLFNYS*VVVMMY 40
           F+F P++++MH+LF++ Y  VV M+Y
Sbjct: 101 FSFEPWRMLMHSLFIW-YQIVVQMIY 125


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,871,451
Number of Sequences: 219361
Number of extensions: 224970
Number of successful extensions: 330
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 80,573,946
effective HSP length: 21
effective length of database: 75,967,365
effective search space used: 1823216760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top