>MTFA_PASMU (Q9CN71) Putative RNA 2'-O-ribose methyltransferase mtfA (EC|
           2.1.1.-)
          Length = 365

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -1

Query: 153 KCDEFLFSFL*KNGKCFGEKKCKISQQKYVHNFGSCKDGWLKQL 22
           K +E + +FL +      E+K ++++Q Y  + G+C  GW  QL
Sbjct: 197 KLEEAILTFLSRE-----EEKKRLNEQMYAVDLGACPGGWTYQL 235

>CH25H_PIG (Q4G1G8) Cholesterol 25-hydroxylase (EC 1.14.99.38) (Cholesterol|
           25-monooxygenase)
          Length = 270

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 68  YFCWEILHFFSPKHLPFFYKKENKNSSHFA 157
           +F W +LH   P     F+K  ++NSS FA
Sbjct: 139 FFIWHVLHHKVPWLYRTFHKMHHQNSSSFA 168

>NU5C_VICFA (P15958) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC|
           1.6.5.-) (NAD(P)H dehydrogenase, chain 5)
           (NADH-plastoquinone oxidoreductase chain 5)
          Length = 746

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 95  FSPKHLPFFYKKENKNSSHFAAVAVCLCT 181
           F  K+LPFFY  E+ N+  F+ + + L T
Sbjct: 534 FGTKNLPFFYPHESDNTMLFSMLVLVLFT 562

>MATK_VERRI (Q7YKL5) Maturase K (Intron maturase)|
          Length = 508

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 143 SFYFPFYKRMVSALEKKNAKFPN 75
           S   PF +R++S LEKK  KF N
Sbjct: 101 SVEIPFSRRLISCLEKKIVKFQN 123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,879,960
Number of Sequences: 219361
Number of extensions: 686320
Number of successful extensions: 1731
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1730
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)