>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 83      cgtcagcaaatcatgagctca 103
               |||||||||||||||||||||
Sbjct: 3469132 cgtcagcaaatcatgagctca 3469112

>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12,
             complete sequence
          Length = 103330

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    cgtcagcaaatcatgagctca 103
             |||||||||||||||||||||
Sbjct: 41243 cgtcagcaaatcatgagctca 41263

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 83      cgtcagcaaatcatgagctca 103
               |||||||||||||||||||||
Sbjct: 3469243 cgtcagcaaatcatgagctca 3469223

>gb|AC110387.6| Rattus norvegicus 1 BAC CH230-209H8 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 226439

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ccagatgcacaaaatgacat 56
             ||||||||||||||||||||
Sbjct: 51102 ccagatgcacaaaatgacat 51083

>emb|BX005403.15| Zebrafish DNA sequence from clone DKEY-81J11 in linkage group 17,
             complete sequence
          Length = 74369

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     ccaaaaattggtactcccgatgct 25
             ||||||||||||||||| ||||||
Sbjct: 25941 ccaaaaattggtactcctgatgct 25964

>emb|BX511245.6| Zebrafish DNA sequence from clone CH211-125O16 in linkage group 17,
             complete sequence
          Length = 96687

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 2     ccaaaaattggtactcccgatgct 25
             ||||||||||||||||| ||||||
Sbjct: 20913 ccaaaaattggtactcctgatgct 20890

>emb|AJ583671.1| Vibrio fischeri fnr gene for FNR type regulator
          Length = 953

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 74  ccaaaacatcgtcagcaaatcatg 97
           ||||||| ||||||||||||||||
Sbjct: 559 ccaaaacttcgtcagcaaatcatg 582

>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 74      ccaaaacatcgtcagcaaatcatg 97
               ||||||| ||||||||||||||||
Sbjct: 1461176 ccaaaacttcgtcagcaaatcatg 1461199

>emb|AM072825.1| Saccharomyces castelli mRNA for beclin 1 (atg6 gene)
          Length = 1494

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 21   atgcttcaaatgttatcca 39
            |||||||||||||||||||
Sbjct: 1087 atgcttcaaatgttatcca 1069

>gb|J02428.1|VSVCG Vesicular stomatitis Indiana virus, complete genome
          Length = 11161

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 15   ctcccgatgcttcaaatgt 33
            |||||||||||||||||||
Sbjct: 1885 ctcccgatgcttcaaatgt 1867

>emb|AL591885.11| Human DNA sequence from clone RP11-655L13 on chromosome 1 Contains the
             5' end of a novel gene (LOC339529) and a CpG island,
             complete sequence
          Length = 128312

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    catcgaatttgaatgaaag 72
             |||||||||||||||||||
Sbjct: 24826 catcgaatttgaatgaaag 24808

>gb|M15121.1|VSVGINI Vesicular stomatitis Indiana virus polymerase associated protein
           (NS) gene, complete cds
          Length = 814

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 15  ctcccgatgcttcaaatgt 33
           |||||||||||||||||||
Sbjct: 500 ctcccgatgcttcaaatgt 482

>gb|L25026.1|VSVRNAFRF Vesicular stomatitis Indiana virus isolate Indiana 87VCB RNA
           fragment
          Length = 423

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 15  ctcccgatgcttcaaatgt 33
           |||||||||||||||||||
Sbjct: 229 ctcccgatgcttcaaatgt 211

>gb|U13898.1|VSU13898 Vesicular stomatitis Indiana virus strain tsW16B nucleocapsid (N) and
            phosphoprotein (P) genes, complete cds
          Length = 2149

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 15   ctcccgatgcttcaaatgt 33
            |||||||||||||||||||
Sbjct: 1835 ctcccgatgcttcaaatgt 1817

>gb|U12967.1|VSU12967 Vesicular stomatitis Indiana virus nucleocapsid (N) and
            phosphoprotein (P) genes, complete cds
          Length = 2149

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 15   ctcccgatgcttcaaatgt 33
            |||||||||||||||||||
Sbjct: 1835 ctcccgatgcttcaaatgt 1817

>gb|AF252226.1| Vesicular stomatitis Indiana virus isolate in87vcb phosphoprotein
           gene, partial cds
          Length = 423

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 15  ctcccgatgcttcaaatgt 33
           |||||||||||||||||||
Sbjct: 229 ctcccgatgcttcaaatgt 211

>emb|AL133263.8| Human DNA sequence from clone RP3-347L7 on chromosome 6 Contains the
            3' end of a gene for a novel protein, complete sequence
          Length = 33354

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 22   tgcttcaaatgttatccagatgc 44
            |||||||||||||||||| ||||
Sbjct: 6066 tgcttcaaatgttatccaaatgc 6044

>gb|AC105217.4| Homo sapiens chromosome , clone RP11-384E22, complete sequence
          Length = 158653

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 28    aaatgttatccagatgcacaaaa 50
             |||| ||||||||||||||||||
Sbjct: 26583 aaattttatccagatgcacaaaa 26605

>gb|AC087664.5| Homo sapiens chromosome 8, clone RP11-379I19, complete sequence
          Length = 199456

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 27   caaatgttatccagatgca 45
            |||||||||||||||||||
Sbjct: 7391 caaatgttatccagatgca 7409

>gb|AC105048.4| Homo sapiens chromosome 18, clone RP11-256H12, complete sequence
          Length = 152488

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 28    aaatgttatccagatgcacaaaa 50
             |||| ||||||||||||||||||
Sbjct: 79502 aaattttatccagatgcacaaaa 79524

>gb|AC107934.3| Homo sapiens chromosome 8, clone RP11-960H2, complete sequence
          Length = 161638

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 27     caaatgttatccagatgca 45
              |||||||||||||||||||
Sbjct: 154735 caaatgttatccagatgca 154753

>gb|AC027216.6| Homo sapiens chromosome 18, clone RP11-440L16, complete sequence
          Length = 170843

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     tccagatgcacaaaatgac 54
              |||||||||||||||||||
Sbjct: 110297 tccagatgcacaaaatgac 110315

>gb|AC021843.6|AC021843 Homo sapiens chromosome 18, clone RP11-713C1, complete sequence
          Length = 159480

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 36     tccagatgcacaaaatgac 54
              |||||||||||||||||||
Sbjct: 103003 tccagatgcacaaaatgac 102985

>gb|AC062032.5| Homo sapiens BAC clone RP11-515K12 from 2, complete sequence
          Length = 182147

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 30     atgttatccagatgcacaaaatg 52
              ||||||||||||| |||||||||
Sbjct: 181227 atgttatccagatccacaaaatg 181249

>gb|AC007749.3| Homo sapiens BAC clone RP11-574O16 from 2, complete sequence
          Length = 193644

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    tgaatgaaagcccaaaaca 81
             |||||||||||||||||||
Sbjct: 30079 tgaatgaaagcccaaaaca 30097

>gb|AC093784.3| Homo sapiens BAC clone RP11-211K17 from 2, complete sequence
          Length = 165500

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    caaaatgacatcgaatttg 64
             |||||||||||||||||||
Sbjct: 64303 caaaatgacatcgaatttg 64321

>emb|X04453.1|RHVSVIN Vesicular stomatitis Indiana virus NS gene for nonstructural
           protein
          Length = 814

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 15  ctcccgatgcttcaaatgt 33
           |||||||||||||||||||
Sbjct: 500 ctcccgatgcttcaaatgt 482

>emb|X04196.1|RHVSVNS Vesicular stomatitis virus (VSV) phosphoprotein (NS) gene
          Length = 849

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 15  ctcccgatgcttcaaatgt 33
           |||||||||||||||||||
Sbjct: 514 ctcccgatgcttcaaatgt 496

>emb|CT030643.5| Mouse DNA sequence from clone RP23-348M4 on chromosome 12, complete
              sequence
          Length = 209600

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     atgcttcaaatgttatcca 39
              |||||||||||||||||||
Sbjct: 160177 atgcttcaaatgttatcca 160195


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,041,709
Number of Sequences: 3902068
Number of extensions: 1041709
Number of successful extensions: 99052
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98954
Number of HSP's gapped (non-prelim): 98
length of query: 122
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 101
effective length of database: 17,151,101,840
effective search space: 1732261285840
effective search space used: 1732261285840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)