| Clone Name | rbaet56h06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF112966.1| Triticum aestivum chitinase IV precursor (Cht4) mRNA, complete cds Length = 1088 Score = 141 bits (71), Expect = 9e-31 Identities = 174/209 (83%), Gaps = 12/209 (5%) Strand = Plus / Minus Query: 7 tatgtttatattacctatatcttaatacagaaatccaaatt----acatgcggagaatgt 62 |||||||| ||||||||||| | |||||||||||||||||| |||| | | ||| Sbjct: 1028 tatgtttacattacctatatatgaatacagaaatccaaatttattacatatacatagtgt 969 Query: 63 atagagatccccgaatagacagggcggtagaggagtacgagcatcgctagaacggttttt 122 ||||| ||||| ||||| | |||| ||||||| |||| |||||||||||||| || |||| Sbjct: 968 atagatatcccagaatacatagggaggtagagcagtaggagcatcgctagaaaggctttt 909 Query: 123 gcgcgtcgatcaattcag--------acctagcaagtgaggttgttccccgggtcgacgc 174 |||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 908 gcgcgtcgatcaattcagacccaagcacctagcaagtgaggttgttccctgggtcgacgt 849 Query: 175 cgaactgcttgcagtagtccatgtagtag 203 ||||||||||||||| ||| |||||||| Sbjct: 848 tgaactgcttgcagtactccgtgtagtag 820
>gb|AF112963.1| Triticum aestivum chitinase II precursor (Cht2) mRNA, complete cds Length = 956 Score = 97.6 bits (49), Expect = 1e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 143 ctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagta 202 |||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||| Sbjct: 759 ctagcaagtgaggttgttccccgggtcgaccccgaactgcttgcagtactccacgtagta 700 Query: 203 g 203 | Sbjct: 699 g 699 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 7 tatgtttatattacctatatcttaatacagaaatccaaattacat 51 ||||||||||||||| |||| | |||||||||||||||||||||| Sbjct: 900 tatgtttatattaccgatatatgaatacagaaatccaaattacat 856
>gb|AY532788.1| Zea diploperennis isolate d8 chitinase (chiA) gene, complete cds Length = 1110 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 954 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 895 Query: 202 ag 203 || Sbjct: 894 ag 893
>gb|AY532787.1| Zea diploperennis isolate d7 chitinase (chiA) gene, complete cds Length = 1110 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 954 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 895 Query: 202 ag 203 || Sbjct: 894 ag 893
>gb|AY532786.1| Zea diploperennis isolate d6 chitinase (chiA) gene, complete cds Length = 1110 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 954 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 895 Query: 202 ag 203 || Sbjct: 894 ag 893
>gb|AY532785.1| Zea diploperennis isolate d5 chitinase (chiA) gene, complete cds Length = 1110 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 954 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 895 Query: 202 ag 203 || Sbjct: 894 ag 893
>gb|AY532784.1| Zea diploperennis isolate d4 chitinase (chiA) gene, complete cds Length = 1110 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 954 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 895 Query: 202 ag 203 || Sbjct: 894 ag 893
>gb|AY532783.1| Zea diploperennis isolate d3 chitinase (chiA) gene, complete cds Length = 1110 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 954 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 895 Query: 202 ag 203 || Sbjct: 894 ag 893
>gb|AY532782.1| Zea diploperennis isolate d2 chitinase (chiA) gene, complete cds Length = 1104 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 948 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 889 Query: 202 ag 203 || Sbjct: 888 ag 887
>gb|AY532781.1| Zea diploperennis isolate d1 chitinase (chiA) gene, complete cds Length = 1107 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 954 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 895 Query: 202 ag 203 || Sbjct: 894 ag 893
>gb|AY532780.1| Zea mays subsp. parviglumis isolate p14 chitinase (chiA) gene, complete cds Length = 1131 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 969 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 910 Query: 202 ag 203 || Sbjct: 909 ag 908
>gb|AY532779.1| Zea mays subsp. parviglumis isolate p13b chitinase (chiA) gene, complete cds Length = 1094 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 956 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 897 Query: 202 ag 203 || Sbjct: 896 ag 895
>gb|AY532778.1| Zea mays subsp. parviglumis isolate p13 chitinase (chiA) gene, complete cds Length = 1094 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 956 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 897 Query: 202 ag 203 || Sbjct: 896 ag 895
>gb|AY532777.1| Zea mays subsp. parviglumis isolate p12 chitinase (chiA) gene, complete cds Length = 1128 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 968 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 909 Query: 202 ag 203 || Sbjct: 908 ag 907
>gb|AY532776.1| Zea mays subsp. parviglumis isolate p11 chitinase (chiA) gene, complete cds Length = 1127 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 966 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 907 Query: 202 ag 203 || Sbjct: 906 ag 905
>gb|AY532775.1| Zea mays subsp. parviglumis isolate p9 chitinase (chiA) gene, complete cds Length = 1094 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 959 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 900 Query: 202 ag 203 || Sbjct: 899 ag 898
>gb|AY532774.1| Zea mays subsp. parviglumis isolate p8 chitinase (chiA) gene, complete cds Length = 1132 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 977 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 918 Query: 202 ag 203 || Sbjct: 917 ag 916
>gb|AY532773.1| Zea mays subsp. parviglumis isolate p6 chitinase (chiA) gene, complete cds Length = 1118 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 959 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 900 Query: 202 ag 203 || Sbjct: 899 ag 898
>gb|AY532772.1| Zea mays subsp. parviglumis isolate p5 chitinase (chiA) gene, complete cds Length = 1104 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 966 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 907 Query: 202 ag 203 || Sbjct: 906 ag 905
>gb|AY532771.1| Zea mays subsp. parviglumis isolate p4 chitinase (chiA) gene, complete cds Length = 1122 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 966 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 907 Query: 202 ag 203 || Sbjct: 906 ag 905
>gb|AY532770.1| Zea mays subsp. parviglumis isolate p3 chitinase (chiA) gene, complete cds Length = 1101 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 954 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 895 Query: 202 ag 203 || Sbjct: 894 ag 893
>gb|AY532769.1| Zea mays subsp. parviglumis isolate p2 chitinase (chiA) gene, complete cds Length = 1120 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 960 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 901 Query: 202 ag 203 || Sbjct: 900 ag 899
>gb|AY532768.1| Zea mays subsp. parviglumis isolate p1 chitinase (chiA) gene, complete cds Length = 1115 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 954 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 895 Query: 202 ag 203 || Sbjct: 894 ag 893
>gb|AY105600.1| Zea mays PCO133046 mRNA sequence Length = 1116 Score = 52.0 bits (26), Expect = 7e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 145 agcaagtgaggttgttccccgggtcgacgccgaa 178 |||| ||||||||||| ||||||||||||||||| Sbjct: 923 agcaggtgaggttgttgcccgggtcgacgccgaa 890
>gb|AY103546.1| Zea mays PCO155066 mRNA sequence Length = 1179 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagt 201 ||||||||||||||||| ||| |||||||||| || ||||| |||||| | | |||||| Sbjct: 917 cctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagt 858 Query: 202 ag 203 || Sbjct: 857 ag 856
>ref|XM_466626.1| Oryza sativa (japonica cultivar-group), mRNA Length = 976 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Minus Query: 144 tagcaagtgaggttgttccccgggtcgacgccgaactgcttgcag 188 ||||| ||||||||| | || ||||||||||||||||||| |||| Sbjct: 864 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcag 820
>gb|AY532767.1| Tripsacum dactyloides chitinase (chiA) gene, complete cds Length = 967 Score = 50.1 bits (25), Expect = 0.003 Identities = 52/61 (85%) Strand = Plus / Minus Query: 143 ctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagta 202 |||||||||||||||| ||| |||||||||| || ||||| |||||| | | ||||||| Sbjct: 967 ctagcaagtgaggttgggccctgggtcgacgcggagctgctggcagtactgcttgtagta 908 Query: 203 g 203 | Sbjct: 907 g 907
>gb|AF402939.1|AF402939 Sorghum halepense chitinase-B gene, partial cds Length = 922 Score = 50.1 bits (25), Expect = 0.003 Identities = 52/61 (85%) Strand = Plus / Minus Query: 143 ctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagta 202 |||||| ||||||||| ||| ||||||||||||| ||||| |||||| | | ||||||| Sbjct: 922 ctagcaggtgaggttgggcccggggtcgacgccgagctgctggcagtactgcctgtagta 863 Query: 203 g 203 | Sbjct: 862 g 862
>gb|AF402937.1|AF402937 Saccharum officinarum chitinase-B gene, partial cds Length = 914 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 143 ctagcaagtgaggttgttccccgggtcgacgccgaactgct 183 |||||| ||||||||| ||||||||||||||||| ||||| Sbjct: 914 ctagcaggtgaggttgggccccgggtcgacgccgagctgct 874
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Plus Query: 144 tagcaagtgaggttgttccccgggtcgacgccgaactgcttgcag 188 ||||| ||||||||| | || ||||||||||||||||||| |||| Sbjct: 23762550 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcag 23762594
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1058_F07 Length = 95841 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Plus Query: 144 tagcaagtgaggttgttccccgggtcgacgccgaactgcttgcag 188 ||||| ||||||||| | || ||||||||||||||||||| |||| Sbjct: 73134 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcag 73178
>dbj|AK064754.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-G01, full insert sequence Length = 976 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Minus Query: 144 tagcaagtgaggttgttccccgggtcgacgccgaactgcttgcag 188 ||||| ||||||||| | || ||||||||||||||||||| |||| Sbjct: 864 tagcaggtgaggttgctgccggggtcgacgccgaactgctggcag 820
>gb|AY532734.1| Zea mays subsp. parviglumis isolate p13 chitinase (chiB) gene, complete cds Length = 1134 Score = 48.1 bits (24), Expect = 0.011 Identities = 33/36 (91%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||||||||||||||||| Sbjct: 988 cctagcaggtgaggttgggccccgggtcgacgccga 953
>gb|AY532726.1| Zea mays subsp. parviglumis isolate p4 chitinase (chiB) gene, complete cds Length = 1123 Score = 48.1 bits (24), Expect = 0.011 Identities = 33/36 (91%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||||||||||||||||| Sbjct: 983 cctagcaggtgaggttgggccccgggtcgacgccga 948
>gb|AY532725.1| Zea mays subsp. parviglumis isolate p3b chitinase (chiB) gene, complete cds Length = 1114 Score = 48.1 bits (24), Expect = 0.011 Identities = 33/36 (91%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||||||||||||||||| Sbjct: 974 cctagcaggtgaggttgggccccgggtcgacgccga 939
>gb|AY532724.1| Zea mays subsp. parviglumis isolate p3 chitinase (chiB) gene, complete cds Length = 1138 Score = 48.1 bits (24), Expect = 0.011 Identities = 33/36 (91%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||||||||||||||||| Sbjct: 993 cctagcaggtgaggttgggccccgggtcgacgccga 958
>gb|M84165.1|MZECHITB Zea mays chitinase B (seed chitinase) gene, 3'end Length = 810 Score = 46.1 bits (23), Expect = 0.042 Identities = 32/35 (91%) Strand = Plus / Minus Query: 143 ctagcaagtgaggttgttccccgggtcgacgccga 177 |||||| ||||||||| ||||||||||||||||| Sbjct: 810 ctagcaggtgaggttgggccccgggtcgacgccga 776
>gb|AE005944.1| Caulobacter crescentus CB15 section 270 of 359 of the complete genome Length = 10607 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 acgccgaactgcttgcagtagt 192 |||||||||||||||||||||| Sbjct: 9134 acgccgaactgcttgcagtagt 9155
>emb|AL512357.4|CNS07EF6 Human chromosome 14 DNA sequence BAC R-260M19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 174612 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 atcttaatacagaaatccaaat 46 |||||||||||||||||||||| Sbjct: 82840 atcttaatacagaaatccaaat 82819
>gb|AE011988.1| Xanthomonas axonopodis pv. citri str. 306, section 366 of 469 of the complete genome Length = 11904 Score = 42.1 bits (21), Expect = 0.65 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 acgccgaactgcttgcagtag 191 ||||||||||||||||||||| Sbjct: 8941 acgccgaactgcttgcagtag 8961
>gb|AY048375.1| Sorghum bicolor chitinase-B gene, partial cds Length = 927 Score = 42.1 bits (21), Expect = 0.65 Identities = 51/61 (83%) Strand = Plus / Minus Query: 143 ctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagta 202 |||||| ||||||||| ||| ||||||||||||| |||| |||||| | | ||||||| Sbjct: 927 ctagcaggtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtagta 868 Query: 203 g 203 | Sbjct: 867 g 867
>gb|AY047608.1| Sorghum bicolor chitinase-B1 mRNA, complete cds Length = 819 Score = 42.1 bits (21), Expect = 0.65 Identities = 51/61 (83%) Strand = Plus / Minus Query: 143 ctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagta 202 ||||||| |||||||| ||| ||||||||||||| |||| |||||| | | ||||||| Sbjct: 819 ctagcaaatgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtagta 760 Query: 203 g 203 | Sbjct: 759 g 759
>gb|AY047607.1| Sorghum bicolor chitinase-B mRNA, partial cds Length = 789 Score = 42.1 bits (21), Expect = 0.65 Identities = 51/61 (83%) Strand = Plus / Minus Query: 143 ctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagta 202 |||||| ||||||||| ||| ||||||||||||| |||| |||||| | | ||||||| Sbjct: 789 ctagcaggtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtagta 730 Query: 203 g 203 | Sbjct: 729 g 729
>gb|AF402938.1|AF402938 Sorghum arundinaceum chitinase-B gene, partial cds Length = 922 Score = 42.1 bits (21), Expect = 0.65 Identities = 51/61 (83%) Strand = Plus / Minus Query: 143 ctagcaagtgaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagta 202 |||||| ||||||||| ||| ||||||||||||| |||| |||||| | | ||||||| Sbjct: 922 ctagcaggtgaggttgggcccggggtcgacgccgagctgccggcagtactgcttgtagta 863 Query: 203 g 203 | Sbjct: 862 g 862
>ref|XM_473009.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 858 Score = 40.1 bits (20), Expect = 2.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 152 gaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagtag 203 ||||||| ||||||| |||||||||||| |||||||||| |||||||| Sbjct: 849 gaggttgccccccgggctgacgccgaactggcggcagtagtccttgtagtag 798
>gb|BT016363.1| Zea mays clone Contig196 mRNA sequence Length = 1079 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 876 cctagcaggtgaggttgggcccggggtcgacgccga 841
>gb|BT016338.1| Zea mays clone Contig171 mRNA sequence Length = 1186 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 869 cctagcaggtgaggttgggcccggggtcgacgccga 834
>gb|AY532742.1| Zea diploperennis isolate d8 chitinase (chiB) gene, complete cds Length = 1081 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 962 cctagcaggtgaggttgggcccggggtcgacgccga 927
>gb|AY532741.1| Zea diploperennis isolate d7 chitinase (chiB) gene, complete cds Length = 1111 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 973 cctagcaggtgaggttgggcccggggtcgacgccga 938
>gb|AY532740.1| Zea diploperennis isolate d6 chitinase (chiB) gene, complete cds Length = 1128 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 996 cctagcaggtgaggttgggcccggggtcgacgccga 961
>gb|AY532739.1| Zea diploperennis isolate d5 chitinase (chiB) gene, complete cds Length = 1080 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 961 cctagcaggtgaggttgggcccggggtcgacgccga 926
>gb|AY532738.1| Zea diploperennis isolate d4 chitinase (chiB) gene, complete cds Length = 1081 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 962 cctagcaggtgaggttgggcccggggtcgacgccga 927
>gb|AY532737.1| Zea diploperennis isolate d2 chitinase (chiB) gene, complete cds Length = 1081 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 962 cctagcaggtgaggttgggcccggggtcgacgccga 927
>gb|AY532736.1| Zea diploperennis isolate d1 chitinase (chiB) gene, complete cds Length = 1122 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 978 cctagcaggtgaggttgggcccggggtcgacgccga 943
>gb|AY532735.1| Zea mays subsp. parviglumis isolate p15 chitinase (chiB) gene, complete cds Length = 1121 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 977 cctagcaggtgaggttgggcccggggtcgacgccga 942
>gb|AY532733.1| Zea mays subsp. parviglumis isolate p12 chitinase (chiB) gene, complete cds Length = 1127 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 983 cctagcaggtgaggttgggcccggggtcgacgccga 948
>gb|AY532732.1| Zea mays subsp. parviglumis isolate p11 chitinase (chiB) gene, complete cds Length = 1126 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 986 cctagcaggtgaggttgggcccggggtcgacgccga 951
>gb|AY532731.1| Zea mays subsp. parviglumis isolate p11b chitinase (chiB) gene, complete cds Length = 1140 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 996 cctagcaggtgaggttgggcccggggtcgacgccga 961
>gb|AY532730.1| Zea mays subsp. parviglumis isolate p8 chitinase (chiB) gene, complete cds Length = 1127 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 988 cctagcaggtgaggttgggcccggggtcgacgccga 953
>gb|AY532729.1| Zea mays subsp. parviglumis isolate p6 chitinase (chiB) gene, complete cds Length = 1123 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 984 cctagcaggtgaggttgggcccggggtcgacgccga 949
>gb|AY532728.1| Zea mays subsp. parviglumis isolate p5b chitinase (chiB) gene, complete cds Length = 1138 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 994 cctagcaggtgaggttgggcccggggtcgacgccga 959
>gb|AY532727.1| Zea mays subsp. parviglumis isolate p5 chitinase (chiB) gene, complete cds Length = 1133 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 989 cctagcaggtgaggttgggcccggggtcgacgccga 954
>gb|AY532723.1| Zea mays subsp. parviglumis isolate p2 chitinase (chiB) gene, complete cds Length = 1127 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 981 cctagcaggtgaggttgggcccggggtcgacgccga 946
>gb|AY532722.1| Zea mays subsp. parviglumis isolate p1 chitinase (chiB) gene, complete cds Length = 1130 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 142 cctagcaagtgaggttgttccccgggtcgacgccga 177 ||||||| ||||||||| ||| ||||||||||||| Sbjct: 985 cctagcaggtgaggttgggcccggggtcgacgccga 950
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 acgccgaactgcttgcagta 190 |||||||||||||||||||| Sbjct: 4056256 acgccgaactgcttgcagta 4056275
>gb|AC108781.9| Mus musculus, clone RP23-304K14, complete sequence Length = 183718 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ttactatgtttatattacctatat 26 |||||||||||||||| ||||||| Sbjct: 42913 ttactatgtttatatttcctatat 42890
>gb|AE012444.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 352 of 460 of the complete genome Length = 12739 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 acgccgaactgcttgcagta 190 |||||||||||||||||||| Sbjct: 12228 acgccgaactgcttgcagta 12247
>gb|AC156501.3| Mus musculus BAC clone RP23-358M3 from chromosome 14, complete sequence Length = 195115 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ttactatgtttatattacctatat 26 |||||||||||||||| ||||||| Sbjct: 185015 ttactatgtttatatttcctatat 185038
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 acgccgaactgcttgcagta 190 |||||||||||||||||||| Sbjct: 1068127 acgccgaactgcttgcagta 1068108
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 2.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 152 gaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagtag 203 ||||||| ||||||| |||||||||||| |||||||||| |||||||| Sbjct: 24663314 gaggttgccccccgggctgacgccgaactggcggcagtagtccttgtagtag 24663365
>gb|AC099053.2| Homo sapiens chromosome 3 clone RP11-464H2, complete sequence Length = 200069 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ctatatcttaatacagaaat 40 |||||||||||||||||||| Sbjct: 76268 ctatatcttaatacagaaat 76287
>gb|AC078878.20| Homo sapiens 12 BAC RP11-983C2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172393 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tatgtttatattacctatat 26 |||||||||||||||||||| Sbjct: 82021 tatgtttatattacctatat 82002
>dbj|AK099973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128C09, full insert sequence Length = 1059 Score = 40.1 bits (20), Expect = 2.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 152 gaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagtag 203 ||||||| ||||||| |||||||||||| |||||||||| |||||||| Sbjct: 756 gaggttgccccccgggctgacgccgaactggcggcagtagtccttgtagtag 705
>dbj|AK060363.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-H09, full insert sequence Length = 1078 Score = 40.1 bits (20), Expect = 2.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 152 gaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagtag 203 ||||||| ||||||| |||||||||||| |||||||||| |||||||| Sbjct: 755 gaggttgccccccgggctgacgccgaactggcggcagtagtccttgtagtag 704
>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete sequence Length = 97077 Score = 40.1 bits (20), Expect = 2.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 152 gaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagtag 203 ||||||| ||||||| |||||||||||| |||||||||| |||||||| Sbjct: 91366 gaggttgccccccgggctgacgccgaactggcggcagtagtccttgtagtag 91417
>gb|AC101752.14| Mus musculus chromosome 1, clone RP24-344C18, complete sequence Length = 164759 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tatgtttatattacctatat 26 |||||||||||||||||||| Sbjct: 37710 tatgtttatattacctatat 37691
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 40.1 bits (20), Expect = 2.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 152 gaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagtag 203 ||||||| ||||||| |||||||||||| |||||||||| |||||||| Sbjct: 52837 gaggttgccccccgggctgacgccgaactggcggcagtagtccttgtagtag 52888
>dbj|AB054811.1| Oryza sativa (indica cultivar-group) gene for PR-3 class IV chitinase, complete cds Length = 2187 Score = 40.1 bits (20), Expect = 2.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 152 gaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagtag 203 ||||||| ||||||| |||||||||||| |||||||||| |||||||| Sbjct: 1758 gaggttgccccccgggctgacgccgaactggcggcagtagtccttgtagtag 1707
>dbj|AB054687.1| Oryza sativa (japonica cultivar-group) Cht4 gene for PR-3 class IV chitinase, complete cds Length = 2172 Score = 40.1 bits (20), Expect = 2.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 152 gaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagtag 203 ||||||| ||||||| |||||||||||| |||||||||| |||||||| Sbjct: 1985 gaggttgccccccgggctgacgccgaactggcggcagtagtccttgtagtag 1934
>dbj|AB003194.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase IIb, complete cds Length = 1036 Score = 40.1 bits (20), Expect = 2.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 152 gaggttgttccccgggtcgacgccgaactgcttgcagtagtccatgtagtag 203 ||||||| ||||||| |||||||||||| |||||||||| |||||||| Sbjct: 745 gaggttgccccccgggctgacgccgaactggcggcagtagtccttgtagtag 694 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,250,549 Number of Sequences: 3902068 Number of extensions: 1250549 Number of successful extensions: 86007 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 85783 Number of HSP's gapped (non-prelim): 225 length of query: 203 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 181 effective length of database: 17,147,199,772 effective search space: 3103643158732 effective search space used: 3103643158732 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)