>emb|X62438.1|HVPERO H.vulgare mRNA for peroxidase
          Length = 740

 Score =  438 bits (221), Expect = e-120
 Identities = 266/277 (96%), Gaps = 3/277 (1%)
 Strand = Plus / Minus

                                                                       
Query: 6   ataaaattcattctttgttgagaaaataaagtggatccagtcaaactttacgatctctct 65
           |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 733 ataaaattcattatttgttgagaaaataaagtggatccagtcaaactttacgacctctct 674

                                                                       
Query: 66  cgcacacacaacggatgcatatgttttgacctctcatcttattggctagacatcacactt 125
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cgcacacacaacagatgcatatgttttgacctctcatcttattggctagacatcacactt 614

                                                                       
Query: 126 ccacgattcaaagtttaaaacttttttactacttaacggccactcacacagtcacacagt 185
           |||||||||||||||||||||   |  |||||||||||||||||||||||||||||||||
Sbjct: 613 ccacgattcaaagtttaaaacacatagactacttaacggccactcacacagtcacacagt 554

                                                                       
Query: 186 actactacgttacaccgattggttatatatctctcacatgtcagcggcgatcccctcgtc 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 553 actactacgttacaccgattggttatatatctctcacatgtcagcggcgatcccctcgt- 495

                                                
Query: 246 gccgggcgacggcggtctcgatgtcctggacacgcct 282
           ||| ||||||||||||||||||||||| |||||||||
Sbjct: 494 gcc-ggcgacggcggtctcgatgtcct-gacacgcct 460

>emb|AJ003141.1|HVAJ3141 Hordeum vulgare mRNA for stress-related peroxidase
          Length = 1245

 Score =  323 bits (163), Expect = 2e-85
 Identities = 185/191 (96%), Gaps = 1/191 (0%)
 Strand = Plus / Minus

                                                                        
Query: 92   tgacctctcatcttattggctagacatcacacttccacgattcaaagtttaaaacttttt 151
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||   | 
Sbjct: 1245 tgacctctcatcttattggctagacatcacacttccacgattcaaagtttaaaacacata 1186

                                                                        
Query: 152  tactacttaacggccactcacacagtcacacagtactactacgttacaccgattggttat 211
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1185 gactacttaacggccactcacacagtcacacagtactactacgttacaccgattggttat 1126

                                                                        
Query: 212  atatctctcacatgtcagcggcgatcccctcgtcgccgggcgacggcggtctcgatgtcc 271
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1125 atatctctcacatgtcagcggcgatcccctcgtcgcc-ggcgacggcggtctcgatgtcc 1067

                       
Query: 272  tggacacgcct 282
            |||||||||||
Sbjct: 1066 tggacacgcct 1056

>emb|AJ878510.1| Triticum aestivum mRNA for peroxidase precursor (prx gene), cultivar
            Cheyenne
          Length = 1226

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 60/66 (90%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                        
Query: 217  tctcacatgtcagcggcgatcccctcgtcgccgggcgacggcggtctcgatgtcctggac 276
            ||||||||||| |||||||||||||||||||| || |  |||||||||||| ||||||||
Sbjct: 1107 tctcacatgtcggcggcgatcccctcgtcgcc-ggtggtggcggtctcgatatcctggac 1049

                  
Query: 277  acgcct 282
            ||||||
Sbjct: 1048 acgcct 1043

>gb|AC100751.6| Mus musculus chromosome 18, clone RP23-249P18, complete sequence
          Length = 253910

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 166   cactcacacagtcacacagtactact 191
             |||||| |||||||||||||||||||
Sbjct: 35412 cactcatacagtcacacagtactact 35437

>gb|AC108215.4| Homo sapiens BAC clone RP11-630A13 from 4, complete sequence
          Length = 166595

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 16    ttctttgttgagaaaataaag 36
             |||||||||||||||||||||
Sbjct: 26403 ttctttgttgagaaaataaag 26423

>emb|BX323878.10| Zebrafish DNA sequence from clone CH211-57E23 in linkage group 12,
              complete sequence
          Length = 190541

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 18     ctttgttgagaaaataaagtggatc 42
              ||||||||| |||||||||||||||
Sbjct: 148276 ctttgttgacaaaataaagtggatc 148300

>dbj|AB026656.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXK23
          Length = 9670

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 133  tcaaagtttaaaactttttta 153
            |||||||||||||||||||||
Sbjct: 3439 tcaaagtttaaaactttttta 3419

>emb|BX000473.6| Zebrafish DNA sequence from clone CH211-141O9, complete sequence
          Length = 180366

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 18     ctttgttgagaaaataaagtggatc 42
              ||||||||| |||||||||||||||
Sbjct: 168889 ctttgttgacaaaataaagtggatc 168913

>gb|AC107452.10| Mus musculus chromosome 15, clone RP23-236C21, complete sequence
          Length = 180069

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    ttgagaaaataaagtggatc 42
             ||||||||||||||||||||
Sbjct: 35824 ttgagaaaataaagtggatc 35805

>emb|BX927308.14| Zebrafish DNA sequence from clone DKEY-16M19 in linkage group 22,
              complete sequence
          Length = 220546

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 47     caaactttacgatctctctcgcac 70
              |||||||||||||||||| |||||
Sbjct: 163832 caaactttacgatctctcacgcac 163855

>gb|AC122257.4| Mus musculus BAC clone RP23-178I11 from 17, complete sequence
          Length = 222314

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ataaaattcattctttgttg 25
             ||||||||||||||||||||
Sbjct: 72442 ataaaattcattctttgttg 72423

>emb|AL137022.8| Human DNA sequence from clone RP11-344A7 on chromosome 9p21.2-22.3
             Contains the 5' end of a novel gene, a histone H3
             pseudogene, and a CpG island, complete sequence
          Length = 169854

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   caaagtttaaaactttttta 153
             ||||||||||||||||||||
Sbjct: 85763 caaagtttaaaactttttta 85744

>emb|BX538351.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 2/4
          Length = 307050

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 12    ttcattctttgttgagaaaataaa 35
             |||||||||||||||||| |||||
Sbjct: 26597 ttcattctttgttgagaatataaa 26620

>emb|AL033385.1|SPBC2G5 S.pombe chromosome II cosmid c2G5
          Length = 23645

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 135  aaagtttaaaacttttttactact 158
            ||||||||||||||| ||||||||
Sbjct: 9261 aaagtttaaaactttcttactact 9284

>emb|CR937045.1|PT025P03 Pan troglodytes chromosome 11 BAC PTB-025P03, complete sequence
          Length = 173795

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    caaagtttaaaactttttta 153
              ||||||||||||||||||||
Sbjct: 122848 caaagtttaaaactttttta 122829

>gb|AC163270.5| Mus musculus chromosome 1, clone RP24-292B21, complete sequence
          Length = 154928

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   gattcaaagtttaaaactttttta 153
             |||||||||||||| |||||||||
Sbjct: 30718 gattcaaagtttaagactttttta 30695

>gb|AC087518.5| Homo sapiens chromosome , clone RP11-359E19, complete sequence
          Length = 168531

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   gtttaaaacttttttactac 157
             ||||||||||||||||||||
Sbjct: 19072 gtttaaaacttttttactac 19053

>emb|CR293514.9| Zebrafish DNA sequence from clone CH211-153C2 in linkage group 22,
              complete sequence
          Length = 185892

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 47     caaactttacgatctctctcgcac 70
              |||||||||||||||||| |||||
Sbjct: 105158 caaactttacgatctctcacgcac 105181

>gb|AC113209.4| Homo sapiens chromosome 8, clone RP11-1002K11, complete sequence
          Length = 193991

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      ccataaaattcattctttgt 23
              ||||||||||||||||||||
Sbjct: 123756 ccataaaattcattctttgt 123775

>ref|XM_627558.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd6_1970),
            partial mRNA
          Length = 7002

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 12   ttcattctttgttgagaaaataaa 35
            |||||||||||||||||| |||||
Sbjct: 1650 ttcattctttgttgagaatataaa 1627

>gb|AC161263.2| Mus musculus BAC clone RP23-296K6 from chromosome 8, complete sequence
          Length = 199032

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 207    gttatatatctctcacatgtcagc 230
              ||||||||||| ||||||||||||
Sbjct: 173426 gttatatatctatcacatgtcagc 173449

>gb|AC007991.7|AC007991 Homo sapiens, clone RP11-44K6, complete sequence
          Length = 149008

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    gtttaaaacttttttactac 157
              ||||||||||||||||||||
Sbjct: 110303 gtttaaaacttttttactac 110284

>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively
               spliced, complete cds
          Length = 1421559

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 4       ccataaaattcattctttgt 23
               ||||||||||||||||||||
Sbjct: 1413359 ccataaaattcattctttgt 1413340

>gb|AC092596.3| Homo sapiens BAC clone RP11-100J5 from 4, complete sequence
          Length = 175644

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 80     atgcatatgttttgacctctcatcttattggc 111
              |||||||||||| ||||| ||||||| |||||
Sbjct: 156758 atgcatatgtttagacctgtcatctttttggc 156727

>gb|AC084341.17| Homo sapiens chromosome 8, clone RP11-760J15, complete sequence
          Length = 141058

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    gttgagaaaataaagtggat 41
             ||||||||||||||||||||
Sbjct: 94793 gttgagaaaataaagtggat 94774

>emb|AJ132756.1|ONO132756 Ophiostoma novo-ulmi mitovirus 6-Ld mRNA for putative RNA-dependent
            RNA polymerase
          Length = 2343

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 11   attcattctttgttgagaaa 30
            ||||||||||||||||||||
Sbjct: 1547 attcattctttgttgagaaa 1566

>gb|AC138277.16| Mus musculus chromosome 1, clone RP23-67I1, complete sequence
          Length = 216155

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     aagccataaaattcattctttgtt 24
             |||||||||| |||||||||||||
Sbjct: 67296 aagccataaatttcattctttgtt 67319

>gb|AC165167.3| Mus musculus BAC clone RP23-27M6 from chromosome 17, complete sequence
          Length = 235787

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      ataaaattcattctttgttg 25
              ||||||||||||||||||||
Sbjct: 166995 ataaaattcattctttgttg 166976

>gb|AC144858.3| Mus musculus BAC clone RP24-144F3 from 8, complete sequence
          Length = 185158

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 207   gttatatatctctcacatgtcagc 230
             ||||||||||| ||||||||||||
Sbjct: 41286 gttatatatctatcacatgtcagc 41309

>emb|AL713991.13| Mouse DNA sequence from clone RP23-132C16 on chromosome 1, complete
            sequence
          Length = 210040

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 130  gattcaaagtttaaaactttttta 153
            |||||||||||||| |||||||||
Sbjct: 4900 gattcaaagtttaagactttttta 4923


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,803,339
Number of Sequences: 3902068
Number of extensions: 2803339
Number of successful extensions: 64793
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64726
Number of HSP's gapped (non-prelim): 62
length of query: 282
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 260
effective length of database: 17,147,199,772
effective search space: 4458271940720
effective search space used: 4458271940720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)