| Clone Name | rbaet56e09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL034371.16|HS273F20 Human DNA sequence from clone RP1-273F20 on chromosome 6q16.1-16.3 Contains the gene for a novel protein and a CpG island, complete sequence Length = 111253 Score = 42.1 bits (21), Expect = 0.64 Identities = 27/29 (93%) Strand = Plus / Plus Query: 28 gggagaggtccattatatcatacactcag 56 |||||||| |||||| ||||||||||||| Sbjct: 45070 gggagaggaccattagatcatacactcag 45098
>emb|CR318662.11| Zebrafish DNA sequence from clone CH211-213L7 in linkage group 10, complete sequence Length = 200648 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cactcagcgattaaacaata 69 |||||||||||||||||||| Sbjct: 7575 cactcagcgattaaacaata 7594
>emb|AL589846.5| Human DNA sequence from clone RP11-199O16 on chromosome 9, complete sequence Length = 44495 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ttcaaacttttgtagaaata 146 |||||||||||||||||||| Sbjct: 30394 ttcaaacttttgtagaaata 30413
>emb|AL357060.31| Human DNA sequence from clone RP11-356I2 on chromosome 6 Contains three novel genes, the TNFAIP3 gene for tumour necrosis factor alpha-induced protein 3 and a CpG island, complete sequence Length = 182209 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tacatttcctttcatgcatg 28 |||||||||||||||||||| Sbjct: 8462 tacatttcctttcatgcatg 8481
>gb|AC133480.2| Homo sapiens 12 BAC RP11-12K6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 128301 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 agaaatacgaaaatctcgaaacaa 163 ||||||| |||||||||||||||| Sbjct: 112244 agaaataggaaaatctcgaaacaa 112267
>gb|BC032871.2| Homo sapiens cDNA clone IMAGE:5264902, partial cds Length = 3421 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 aaacaaggcaacccagcctaggct 123 ||||||||||||||||||| |||| Sbjct: 669 aaacaaggcaacccagcctgggct 646
>gb|AC026801.7| Homo sapiens chromosome 5 clone CTD-2517O10, complete sequence Length = 177284 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 aaacaaggcaacccagcctaggct 123 ||||||||||||||||||| |||| Sbjct: 109248 aaacaaggcaacccagcctgggct 109225
>emb|CR925751.6| Zebrafish DNA sequence from clone DKEY-264M23 in linkage group 10, complete sequence Length = 111720 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cactcagcgattaaacaata 69 |||||||||||||||||||| Sbjct: 101117 cactcagcgattaaacaata 101136 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,753,728 Number of Sequences: 3902068 Number of extensions: 1753728 Number of successful extensions: 114340 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114326 Number of HSP's gapped (non-prelim): 14 length of query: 202 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 180 effective length of database: 17,147,199,772 effective search space: 3086495958960 effective search space used: 3086495958960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)