ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet56d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GL33_ARATH (P94072) Germin-like protein subfamily 3 member 3 pre... 28 6.0

>GL33_ARATH (P94072) Germin-like protein subfamily 3 member 3 precursor|
           (AtGER3) (AtGLP2)
          Length = 211

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -2

Query: 293 ANNLPSAVVEKVTFLDDAQ 237
           AN+LPS +VE  TFL DA+
Sbjct: 181 ANDLPSELVEATTFLSDAE 199


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,829,092
Number of Sequences: 219361
Number of extensions: 388106
Number of successful extensions: 634
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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