>EX5B_BORBU (O51578) Exodeoxyribonuclease V beta chain (EC 3.1.11.5)|
          Length = 1169

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 12  ARL-VTSEEKNIFYSEQTYTKALCH**YILFYPPRNYITSNFLPVKIIFLL 161
           ARL + SEEKNIFY   T  K      + LF    N ITS  L +  IF +
Sbjct: 795 ARLKILSEEKNIFYVGATRAK------FALFIIKINSITSKLLEIAKIFTI 839

>VLF1_NPVAC (Q06687) Very late expression factor 1|
          Length = 379

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
 Frame = -2

Query: 307 WTSSPTCATSSRTTSCP-----RMLRSRGVERNRPSSGIDHH 197
           ++ +PT    S+ TS P     R+L   GVE  RP S +  H
Sbjct: 263 YSRNPTILQISKNTSTPFKDFRRLLEESGVEMERPRSNMIRH 304

>YHL1_EBV (P03181) Hypothetical protein BHLF1|
          Length = 660

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -2

Query: 295 PTCATSSRTTSCPRMLRSR-GVERNRPSSG 209
           P C  S+R   CPR  R R G +R  P  G
Sbjct: 519 PGCPRSARNPGCPRTWRRRSGAQRGHPPPG 548



 Score = 27.7 bits (60), Expect = 7.6
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -2

Query: 295 PTCATSSRTTSCPRMLRSR-GVERNRPSSG 209
           P C  S+R   CPR  R R G +R  P  G
Sbjct: 394 PGCPRSARNPGCPRTWRRRSGAQRGHPPPG 423



 Score = 27.7 bits (60), Expect = 7.6
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -2

Query: 295 PTCATSSRTTSCPRMLRSR-GVERNRPSSG 209
           P C  S+R   CPR  R R G +R  P  G
Sbjct: 269 PGCPRSARNPGCPRTWRRRSGAQRGHPPPG 298

>NARG1_PONPY (Q5R4J9) NMDA receptor-regulated protein 1|
          Length = 866

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 2   HLQSKACYFRRKKHILFRTNVHESLMSLIIHPFLSPTKLHYFKLLACKN 148
           HL +   YFR++K +L   +V  +      HP+L    +  F    C++
Sbjct: 675 HLFAFEIYFRKEKFLLMLQSVKRAFAIDSSHPWLHECMIRLFNTAVCES 723

>NARG1_HUMAN (Q9BXJ9) NMDA receptor-regulated protein 1 (N-terminal|
           acetyltransferase) (Tubedown-1 protein) (Tbdn100)
           (Gastric cancer antigen Ga19)
          Length = 866

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +2

Query: 2   HLQSKACYFRRKKHILFRTNVHESLMSLIIHPFLSPTKLHYFKLLACKN 148
           HL +   YFR++K +L   +V  +      HP+L    +  F    C++
Sbjct: 675 HLFAFEIYFRKEKFLLMLQSVKRAFAIDSSHPWLHECMIRLFNTAVCES 723


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,727,971
Number of Sequences: 219361
Number of extensions: 685698
Number of successful extensions: 1801
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1801
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)