| Clone Name | rbaet56c10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL355980.6| Human DNA sequence from clone RP11-295L12 on chromosome 13, complete sequence Length = 191856 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 125 ttcaaacttcttgcctgtaaaaattattt 153 |||||| ||||||||||||||| |||||| Sbjct: 124184 ttcaaatttcttgcctgtaaaatttattt 124156
>gb|AC113195.8| Homo sapiens chromosome 18, clone RP11-1112K22, complete sequence Length = 162760 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 tgtaaaaattatttttctgct 160 ||||||||||||||||||||| Sbjct: 93972 tgtaaaaattatttttctgct 93952
>gb|AC092629.2| Homo sapiens BAC clone RP11-280J8 from 4, complete sequence Length = 148673 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 taaaaattatttttctgctgt 162 ||||||||||||||||||||| Sbjct: 16411 taaaaattatttttctgctgt 16391
>ref|XM_365693.1| Magnaporthe grisea 70-15 hypothetical protein (MG02395.4) partial mRNA Length = 6021 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aagttgtgcgactggatgtg 284 |||||||||||||||||||| Sbjct: 4337 aagttgtgcgactggatgtg 4356
>emb|X64522.1|BLCIFIL B.lanceolatum mRNA for cytoplasmic intermediate filament protein Length = 2117 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cgttggagagctcgtccacc 309 |||||||||||||||||||| Sbjct: 669 cgttggagagctcgtccacc 650
>emb|BX470098.15| Zebrafish DNA sequence from clone DKEY-148D16 in linkage group 12, complete sequence Length = 249826 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 catattttattcagaacaaa 60 |||||||||||||||||||| Sbjct: 55426 catattttattcagaacaaa 55445
>gb|AC026305.20| Homo sapiens 3 BAC RP11-91A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104150 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 tccttttttatcccccacga 113 |||||||||||||||||||| Sbjct: 38049 tccttttttatcccccacga 38068
>gb|AC016766.6| Homo sapiens BAC clone RP11-558I6 from 2, complete sequence Length = 194374 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 taaaaattatttttctgctg 161 |||||||||||||||||||| Sbjct: 97136 taaaaattatttttctgctg 97117
>gb|AC142274.3| Mus musculus BAC clone RP23-251M14 from 6, complete sequence Length = 179732 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 aaaaattatttttctgctgt 162 |||||||||||||||||||| Sbjct: 89162 aaaaattatttttctgctgt 89143 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,869,385 Number of Sequences: 3902068 Number of extensions: 2869385 Number of successful extensions: 62403 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62386 Number of HSP's gapped (non-prelim): 17 length of query: 311 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 289 effective length of database: 17,147,199,772 effective search space: 4955540734108 effective search space used: 4955540734108 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)