ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet56c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U76895.1|TAU76895 Triticum aestivum beta-tubulin 4 (Tubb4) mR... 198 7e-48
2emb|CT009533.6| Platypus DNA sequence from clone XX-522J9, compl... 44 0.26
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
4emb|BX248331.8| Zebrafish DNA sequence from clone CH211-236D3 in... 44 0.26
5dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.26
6gb|AC127353.3| Mus musculus BAC clone RP23-81P21 from chromosome... 42 1.0
7gb|AC142396.25| Medicago truncatula clone mth2-6g9, complete seq... 42 1.0
8gb|AC093013.14| Homo sapiens 12 BAC RP11-158O15 (Roswell Park Ca... 42 1.0
9gb|AC104689.4| Homo sapiens BAC clone RP11-158O16 from 4, comple... 42 1.0
10gb|AF274033.1|AF274033 Atriplex hortensis apetala2 domain-contai... 42 1.0
11ref|XM_629653.1| Dictyostelium discoideum hypothetical protein (... 40 4.1
12gb|AC159407.1| Trypanosoma brucei chromosome 8 clone RPCI93-12O1... 40 4.1
13gb|AC119820.20| Mus musculus chromosome 1, clone RP23-148M18, co... 40 4.1
14gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
15gb|AC158793.4| Mus musculus chromosome 1, clone RP23-269P13, com... 40 4.1
16gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 40 4.1
17emb|BX088548.10| Zebrafish DNA sequence from clone CH211-188E4, ... 40 4.1
18emb|AL589674.9| Human DNA sequence from clone RP11-137J7 on chro... 40 4.1
19gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 4.1
20emb|AL358117.11| Human DNA sequence from clone RP11-325K2 on chr... 40 4.1
21emb|AL080277.12|HSJ308E17 Human DNA sequence from clone RP1-308E... 40 4.1
22emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 40 4.1
23emb|BX538350.1| Cryptosporidium parvum chromosome 6, complete se... 40 4.1
24emb|AL929313.13| Mouse DNA sequence from clone RP23-101D13 on ch... 40 4.1
25gb|AC119676.2| Homo sapiens chromosome 1 clone RP5-820O16, compl... 40 4.1
26gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare str... 40 4.1
27emb|BX511029.9| Zebrafish DNA sequence from clone DKEY-18H21 in ... 40 4.1
28gb|AC160863.10| Mus musculus 10 BAC RP23-234F23 (Roswell Park Ca... 40 4.1
29gb|AC073492.18| Homo sapiens Xp BAC RP11-460J19 (Roswell Park Ca... 40 4.1
30ref|XM_379141.3| PREDICTED: Homo sapiens hypothetical gene suppo... 40 4.1
31emb|BX247946.6| Zebrafish DNA sequence from clone CH211-231B5 in... 40 4.1
32ref|XM_625363.1| Cryptosporidium parvum Iowa II DNA replication ... 40 4.1
33gb|AC153937.11| Mus musculus 10 BAC RP24-458J4 (Roswell Park Can... 40 4.1
34dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
35dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
36gb|AC074093.6| Homo sapiens BAC clone RP11-206I11 from 2, comple... 40 4.1
37gb|AC174932.1| Ornithorhynchus anatinus BAC clone OABb-260D21 fr... 40 4.1
38emb|BX649473.8| Zebrafish DNA sequence from clone CH211-65G16 in... 40 4.1
39gb|BC043549.1| Homo sapiens hypothetical gene supported by BC043... 40 4.1
40emb|BX649270.3| Sminthopsis DNA sequence from clone RZPD668-231M... 40 4.1
41emb|BX648102.1|HSM808249 Homo sapiens mRNA; cDNA DKFZp686O1327 (... 40 4.1
42emb|AL844186.7| Zebrafish DNA sequence from clone DKEY-265G24, c... 40 4.1
43emb|BX936416.11| Zebrafish DNA sequence from clone CH211-194I16 ... 40 4.1
44emb|BX571725.1| Carp DNA sequence from clone carpf-118, complete... 40 4.1
45emb|BX005009.11| Zebrafish DNA sequence from clone CH211-15A18 i... 40 4.1
46gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
47emb|AL845485.16| Mouse DNA sequence from clone RP23-237D23 on ch... 40 4.1
48emb|AL935131.7| Zebrafish DNA sequence from clone CH211-276G21, ... 40 4.1
49emb|AL935198.6| Zebrafish DNA sequence from clone CH211-198E13, ... 40 4.1
50gb|L48605.1|C2PVCG Bacteriophage c2 complete genome 40 4.1 
>gb|U76895.1|TAU76895 Triticum aestivum beta-tubulin 4 (Tubb4) mRNA, complete cds
          Length = 1866

 Score =  198 bits (100), Expect = 7e-48
 Identities = 168/191 (87%), Gaps = 11/191 (5%)
 Strand = Plus / Minus

                                                                        
Query: 28   taacaataatacttgtcagaacttacaaggaggcgacgactagctcaaggagagcactcg 87
            ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||
Sbjct: 1714 taacaataatacttgtcagaacttacaagg---cgacgactagctcaaggagagcactcg 1658

                                                                        
Query: 88   acagttgaggccgtcgtcaggta--------ccgaccaaaggatgctgaacaagacagac 139
            |||||| ||||| ||||||| ||        | ||||||| ||||||||||| |||||||
Sbjct: 1657 acagttcaggccatcgtcagctatggaccgactgaccaaatgatgctgaacacgacagac 1598

                                                                        
Query: 140  tgcaacgcactactatttttagcaaattacaaaacggggcacacgacgcaacctcgactc 199
            |||||||||||||||    |||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 1597 tgcaacgcactactagccgtagcaaattacaaaacggagcacaagacgcaacctcgactc 1538

                       
Query: 200  atccaagccac 210
            |||||||||||
Sbjct: 1537 atccaagccac 1527
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>emb|CT009533.6| Platypus DNA sequence from clone XX-522J9, complete sequence
          Length = 149919

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 22     taataataacaataatacttgt 43
              ||||||||||||||||||||||
Sbjct: 120304 taataataacaataatacttgt 120325
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 267     cggagcggagcggagcgcatcc 288
               ||||||||||||||||||||||
Sbjct: 5598168 cggagcggagcggagcgcatcc 5598147
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>emb|BX248331.8| Zebrafish DNA sequence from clone CH211-236D3 in linkage group 11,
             complete sequence
          Length = 174071

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 22    taataataacaataatacttgt 43
             ||||||||||||||||||||||
Sbjct: 38263 taataataacaataatacttgt 38284
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>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0489A05
          Length = 158815

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 267   cggagcggagcggagcgcatcc 288
             ||||||||||||||||||||||
Sbjct: 63641 cggagcggagcggagcgcatcc 63620
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>gb|AC127353.3| Mus musculus BAC clone RP23-81P21 from chromosome 18, complete sequence
          Length = 225658

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 117   aaaggatgctgaacaagacag 137
             |||||||||||||||||||||
Sbjct: 77117 aaaggatgctgaacaagacag 77137
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>gb|AC142396.25| Medicago truncatula clone mth2-6g9, complete sequence
          Length = 106058

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    actaataataacaataatact 40
             |||||||||||||||||||||
Sbjct: 27594 actaataataacaataatact 27574
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>gb|AC093013.14| Homo sapiens 12 BAC RP11-158O15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161114

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     taataataacaataatacttg 42
              |||||||||||||||||||||
Sbjct: 113929 taataataacaataatacttg 113949
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>gb|AC104689.4| Homo sapiens BAC clone RP11-158O16 from 4, complete sequence
          Length = 161428

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    taataataacaataatacttg 42
             |||||||||||||||||||||
Sbjct: 47187 taataataacaataatacttg 47167
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>gb|AF274033.1|AF274033 Atriplex hortensis apetala2 domain-containing protein mRNA,
           complete cds
          Length = 1434

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 21  ctaataataacaataatactt 41
           |||||||||||||||||||||
Sbjct: 475 ctaataataacaataatactt 495
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>ref|XM_629653.1| Dictyostelium discoideum hypothetical protein (DDB0184432), partial
           mRNA
          Length = 612

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  taataataacaataatactt 41
           ||||||||||||||||||||
Sbjct: 465 taataataacaataatactt 484
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>gb|AC159407.1| Trypanosoma brucei chromosome 8 clone RPCI93-12O16, complete sequence
          Length = 161249

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     gactaataataacaataata 38
              ||||||||||||||||||||
Sbjct: 118138 gactaataataacaataata 118157
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>gb|AC119820.20| Mus musculus chromosome 1, clone RP23-148M18, complete sequence
          Length = 183287

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 taataataacaataatactt 41
          ||||||||||||||||||||
Sbjct: 56 taataataacaataatactt 75
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>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBb0004A05, complete sequence
          Length = 157913

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     gccgtcgtcaggtaccgacc 116
              ||||||||||||||||||||
Sbjct: 111253 gccgtcgtcaggtaccgacc 111272
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>gb|AC158793.4| Mus musculus chromosome 1, clone RP23-269P13, complete sequence
          Length = 183447

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    taataataacaataatactt 41
             ||||||||||||||||||||
Sbjct: 74415 taataataacaataatactt 74434
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>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     gactaataataacaataata 38
              ||||||||||||||||||||
Sbjct: 256858 gactaataataacaataata 256877
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>emb|BX088548.10| Zebrafish DNA sequence from clone CH211-188E4, complete sequence
          Length = 152713

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 22    taataataacaataatacttgtca 45
             ||||||||||||||||| ||||||
Sbjct: 41368 taataataacaataataattgtca 41391
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>emb|AL589674.9| Human DNA sequence from clone RP11-137J7 on chromosome 6 Contains the
             NMBR gene for neuromedin B receptor, a novel gene and a
             CpG island, complete sequence
          Length = 110764

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   tactatttttagcaaattac 169
             ||||||||||||||||||||
Sbjct: 38546 tactatttttagcaaattac 38527
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>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0044A10, from chromosome 10, complete sequence
          Length = 173374

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    ctaataataacaataatact 40
             ||||||||||||||||||||
Sbjct: 48414 ctaataataacaataatact 48395
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>emb|AL358117.11| Human DNA sequence from clone RP11-325K2 on chromosome 9 Contains a CpG
             island, complete sequence
          Length = 54787

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    taataacaataatacttgtc 44
             ||||||||||||||||||||
Sbjct: 19399 taataacaataatacttgtc 19380
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>emb|AL080277.12|HSJ308E17 Human DNA sequence from clone RP1-308E17 on chromosome 6q22.1-22.3,
              complete sequence
          Length = 145167

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     taataataacaataatactt 41
              ||||||||||||||||||||
Sbjct: 106906 taataataacaataatactt 106887
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>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     gactaataataacaataata 38
              ||||||||||||||||||||
Sbjct: 647386 gactaataataacaataata 647405
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>emb|BX538350.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 1/4
          Length = 287050

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    atacttgtcagaacttacaa 55
             ||||||||||||||||||||
Sbjct: 54778 atacttgtcagaacttacaa 54759
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>emb|AL929313.13| Mouse DNA sequence from clone RP23-101D13 on chromosome 4, complete
             sequence
          Length = 104026

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 22    taataataacaataatacttgtcagaac 49
             ||||||||| |||||||||||| |||||
Sbjct: 53094 taataataataataatacttgttagaac 53121
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>gb|AC119676.2| Homo sapiens chromosome 1 clone RP5-820O16, complete sequence
          Length = 160573

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    actaataataacaataatac 39
             ||||||||||||||||||||
Sbjct: 41882 actaataataacaataatac 41901
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>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0044A10, from chromosome 10, complete sequence
          Length = 169270

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     ctaataataacaataatact 40
              ||||||||||||||||||||
Sbjct: 157684 ctaataataacaataatact 157665
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>emb|BX511029.9| Zebrafish DNA sequence from clone DKEY-18H21 in linkage group 3,
             complete sequence
          Length = 151867

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    taataataacaataatactt 41
             ||||||||||||||||||||
Sbjct: 30212 taataataacaataatactt 30231
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>gb|AC160863.10| Mus musculus 10 BAC RP23-234F23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 189718

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     gactaataataacaataata 38
              ||||||||||||||||||||
Sbjct: 116764 gactaataataacaataata 116745
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>gb|AC073492.18| Homo sapiens Xp BAC RP11-460J19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 155567

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    taataacaataatacttgtc 44
             ||||||||||||||||||||
Sbjct: 25139 taataacaataatacttgtc 25120
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>ref|XM_379141.3| PREDICTED: Homo sapiens hypothetical gene supported by BC043549;
            BX648102 (DKFZp686O1327), mRNA
          Length = 4719

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   gactaataataacaataata 38
            ||||||||||||||||||||
Sbjct: 1772 gactaataataacaataata 1753
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>emb|BX247946.6| Zebrafish DNA sequence from clone CH211-231B5 in linkage group 14,
             complete sequence
          Length = 156559

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    taataataacaataatactt 41
             ||||||||||||||||||||
Sbjct: 59599 taataataacaataatactt 59580
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>ref|XM_625363.1| Cryptosporidium parvum Iowa II DNA replication licensing factor
            MCM6-like AAA ATpase (cgd6_240), partial mRNA
          Length = 3168

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   atacttgtcagaacttacaa 55
            ||||||||||||||||||||
Sbjct: 2068 atacttgtcagaacttacaa 2087
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>gb|AC153937.11| Mus musculus 10 BAC RP24-458J4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 195695

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    gactaataataacaataata 38
             ||||||||||||||||||||
Sbjct: 23021 gactaataataacaataata 23002
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 21       ctaataataacaataatact 40
                ||||||||||||||||||||
Sbjct: 13202165 ctaataataacaataatact 13202146
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 97       gccgtcgtcaggtaccgacc 116
                ||||||||||||||||||||
Sbjct: 19180322 gccgtcgtcaggtaccgacc 19180341
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>gb|AC074093.6| Homo sapiens BAC clone RP11-206I11 from 2, complete sequence
          Length = 155182

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    gactaataataacaataata 38
             ||||||||||||||||||||
Sbjct: 29189 gactaataataacaataata 29170
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>gb|AC174932.1| Ornithorhynchus anatinus BAC clone OABb-260D21 from chromosome unknown,
              complete sequence
          Length = 137944

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     taataataacaataatactt 41
              ||||||||||||||||||||
Sbjct: 123559 taataataacaataatactt 123578
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>emb|BX649473.8| Zebrafish DNA sequence from clone CH211-65G16 in linkage group 1,
              complete sequence
          Length = 167871

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     actaataataacaataatac 39
              ||||||||||||||||||||
Sbjct: 152213 actaataataacaataatac 152232
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>gb|BC043549.1| Homo sapiens hypothetical gene supported by BC043549; BX648102, mRNA
            (cDNA clone IMAGE:5172341)
          Length = 2207

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   gactaataataacaataata 38
            ||||||||||||||||||||
Sbjct: 1779 gactaataataacaataata 1760
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>emb|BX649270.3| Sminthopsis DNA sequence from clone RZPD668-231M3, complete sequence
          Length = 51166

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    taataataacaataatactt 41
             ||||||||||||||||||||
Sbjct: 22122 taataataacaataatactt 22103
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>emb|BX648102.1|HSM808249 Homo sapiens mRNA; cDNA DKFZp686O1327 (from clone DKFZp686O1327)
          Length = 4686

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 19   gactaataataacaataata 38
            ||||||||||||||||||||
Sbjct: 1683 gactaataataacaataata 1664
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>emb|AL844186.7| Zebrafish DNA sequence from clone DKEY-265G24, complete sequence
          Length = 221158

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    acgactaataataacaataa 36
             ||||||||||||||||||||
Sbjct: 80798 acgactaataataacaataa 80779
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>emb|BX936416.11| Zebrafish DNA sequence from clone CH211-194I16 in linkage group 18,
             complete sequence
          Length = 214763

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    ctaataataacaataatact 40
             ||||||||||||||||||||
Sbjct: 58923 ctaataataacaataatact 58942
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>emb|BX571725.1| Carp DNA sequence from clone carpf-118, complete sequence
          Length = 38194

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    gactaataataacaataata 38
             ||||||||||||||||||||
Sbjct: 33456 gactaataataacaataata 33475
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>emb|BX005009.11| Zebrafish DNA sequence from clone CH211-15A18 in linkage group 22,
              complete sequence
          Length = 186690

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     aataataacaataatacttg 42
              ||||||||||||||||||||
Sbjct: 170314 aataataacaataatacttg 170295
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 21       ctaataataacaataatact 40
                ||||||||||||||||||||
Sbjct: 13209505 ctaataataacaataatact 13209486
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>emb|AL845485.16| Mouse DNA sequence from clone RP23-237D23 on chromosome 2, complete
              sequence
          Length = 230213

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    tatttttagcaaattacaaa 172
              ||||||||||||||||||||
Sbjct: 198160 tatttttagcaaattacaaa 198141
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>emb|AL935131.7| Zebrafish DNA sequence from clone CH211-276G21, complete sequence
          Length = 170938

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    taataataacaataatactt 41
             ||||||||||||||||||||
Sbjct: 20629 taataataacaataatactt 20648
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>emb|AL935198.6| Zebrafish DNA sequence from clone CH211-198E13, complete sequence
          Length = 200697

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     taataataacaataatactt 41
              ||||||||||||||||||||
Sbjct: 191177 taataataacaataatactt 191158
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>gb|L48605.1|C2PVCG Bacteriophage c2 complete genome
          Length = 22172

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   gcactactatttttagcaaa 165
             ||||||||||||||||||||
Sbjct: 16474 gcactactatttttagcaaa 16493


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,240,259
Number of Sequences: 3902068
Number of extensions: 2240259
Number of successful extensions: 85530
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85233
Number of HSP's gapped (non-prelim): 295
length of query: 313
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 291
effective length of database: 17,147,199,772
effective search space: 4989835133652
effective search space used: 4989835133652
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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