| Clone Name | rbaet56c06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY333434.1| Salmonella typhimurium plasmid pU302L, complete sequence Length = 84514 Score = 42.1 bits (21), Expect = 0.46 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 acatctattttattccggaaa 30 ||||||||||||||||||||| Sbjct: 39260 acatctattttattccggaaa 39240
>gb|AC113323.12| Mus musculus chromosome 15, clone RP23-451O9, complete sequence Length = 175138 Score = 42.1 bits (21), Expect = 0.46 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cacagacagtgtgatacagtg 88 ||||||||||||||||||||| Sbjct: 20685 cacagacagtgtgatacagtg 20705
>emb|AJ851089.1| Uncultured bacterium pRSB107 plasmid Length = 120592 Score = 42.1 bits (21), Expect = 0.46 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 acatctattttattccggaaa 30 ||||||||||||||||||||| Sbjct: 108928 acatctattttattccggaaa 108908
>gb|DQ381420.1| Escherichia coli plasmid pAPEC-O1-ColBM, complete sequence Length = 174241 Score = 42.1 bits (21), Expect = 0.46 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 acatctattttattccggaaa 30 ||||||||||||||||||||| Sbjct: 66374 acatctattttattccggaaa 66354
>gb|AY545598.5| Escherichia coli plasmid pAPEC-O2-ColV, complete sequence Length = 184501 Score = 42.1 bits (21), Expect = 0.46 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 acatctattttattccggaaa 30 ||||||||||||||||||||| Sbjct: 47816 acatctattttattccggaaa 47796
>emb|CR735143.13| Zebrafish DNA sequence from clone CH211-244P16 in linkage group 5, complete sequence Length = 147626 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 cgaatccacatctatttta 21 ||||||||||||||||||| Sbjct: 1083 cgaatccacatctatttta 1065
>emb|AL356865.19| Human DNA sequence from clone RP11-36N22 on chromosome 10 Contains a pseudogene similar to part of solute carrier family 25, (mitochondrial carrier), member 18 (SLC25A18), the GPR10 gene for G protein-coupled receptor 10 (GR3, PrRPR), a translocase of outer mitochondrial membrane 22 homolog (yeast) (TOM22) (TOMM22) pseudogene and one CpG island, complete sequence Length = 156604 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 aatggccgccatcaaacat 47 ||||||||||||||||||| Sbjct: 97001 aatggccgccatcaaacat 97019
>emb|X53253.1|ECGENES E.chrysanthemi genes inh, prtD, prtE and prtF Length = 5435 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 ccggaaatggccgccatca 42 ||||||||||||||||||| Sbjct: 2896 ccggaaatggccgccatca 2914
>emb|BX927098.24| Zebrafish DNA sequence from clone DKEY-228D14 in linkage group 13, complete sequence Length = 229413 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 cagcatgtagggtgggaaa 107 ||||||||||||||||||| Sbjct: 80231 cagcatgtagggtgggaaa 80213
>gb|AC040977.10| Homo sapiens chromosome 17, clone RP11-589P10, complete sequence Length = 174741 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 aatggccgccatcaaacat 47 ||||||||||||||||||| Sbjct: 3801 aatggccgccatcaaacat 3819
>gb|AC027763.9| Homo sapiens chromosome 17, clone RP11-530N7, complete sequence Length = 169770 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 29 aatggccgccatcaaacat 47 ||||||||||||||||||| Sbjct: 100158 aatggccgccatcaaacat 100140
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 cgaatccacatctatttta 21 ||||||||||||||||||| Sbjct: 1062188 cgaatccacatctatttta 1062170
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 cgaatccacatctatttta 21 ||||||||||||||||||| Sbjct: 3161907 cgaatccacatctatttta 3161925
>emb|CR933780.12| Zebrafish DNA sequence from clone DKEY-60F6 in linkage group 5, complete sequence Length = 227454 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 cgaatccacatctatttta 21 ||||||||||||||||||| Sbjct: 151640 cgaatccacatctatttta 151658
>gb|M60395.1|ERWPRTBCDE Erwinia chrysanthemi prt locus encoding inhibitor (inh) and protease (prtB, prtC) and prtD, prtE, and prtF genes, complete cds Length = 8524 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 ccggaaatggccgccatca 42 ||||||||||||||||||| Sbjct: 2896 ccggaaatggccgccatca 2914 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,001,935 Number of Sequences: 3902068 Number of extensions: 1001935 Number of successful extensions: 61216 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61115 Number of HSP's gapped (non-prelim): 101 length of query: 148 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 127 effective length of database: 17,151,101,840 effective search space: 2178189933680 effective search space used: 2178189933680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)