ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet56b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 323 1e-85
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 323 1e-85
3emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494... 323 1e-85
4emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa... 323 1e-85
5dbj|AK060925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 315 2e-83
6dbj|D12630.1|RICRPL3A Oryza sativa (japonica cultivar-group) mRN... 311 4e-82
7gb|AF346004.1|AF346004 Lolium perenne L3 ribosomal protein mRNA,... 80 2e-12
8ref|XM_540231.2| PREDICTED: Canis familiaris similar to RAB11 fa... 44 0.14
9gb|AC127898.6| Homo sapiens 12 BAC RP11-373K20 (Roswell Park Can... 42 0.53
10gb|AC167724.6| Mus musculus 10 BAC RP23-331P17 (Roswell Park Can... 40 2.1
11gb|AC118212.7| Mus musculus chromosome 6, clone RP24-170E4, comp... 40 2.1
12gb|AC131705.4| Mus musculus BAC clone RP24-130N16 from chromosom... 40 2.1
13gb|AC121994.4| Mus musculus BAC clone RP24-301N9 from chromosome... 40 2.1
14gb|AC114652.7| Mus musculus chromosome 18, clone RP24-156O17, co... 40 2.1
15emb|BX511027.20| Zebrafish DNA sequence from clone CH211-281P14 ... 40 2.1
16gb|AC155327.3| Mus musculus 6 BAC RP24-176G23 (Roswell Park Canc... 40 2.1
17ref|XM_458326.1| Debaryomyces hansenii CBS767 hypothetical prote... 38 8.3
18gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 38 8.3
19gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 38 8.3
20gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome... 38 8.3
21gb|AC147038.2| Pan troglodytes BAC clone RP43-112D23 from 7, com... 38 8.3
22gb|AC149571.3| Rhinolophus ferrumequinum clone VMRC7-305L23, com... 38 8.3
23gb|AC113305.7| Mus musculus chromosome 10, clone RP23-433H22, co... 38 8.3
24ref|XM_754988.1| Ustilago maydis 521 hypothetical protein (UM039... 38 8.3
25gb|AC126932.4| Mus musculus BAC clone RP24-80G20 from chromosome... 38 8.3
26gb|AC122056.4| Mus musculus BAC clone RP24-466A3 from chromosome... 38 8.3
27emb|BX323049.20| Zebrafish DNA sequence from clone DKEY-30L22 in... 38 8.3
28emb|AL358453.8| Human DNA sequence from clone RP11-115M14 on chr... 38 8.3
29ref|XM_789528.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 8.3
30emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS... 38 8.3
31gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 38 8.3
32emb|BX890576.12| Zebrafish DNA sequence from clone DKEY-203O14 i... 38 8.3
33emb|AJ512450.1|RLE512450 Rana lessonae transposon lesBam, clone 2 38 8.3
34emb|AJ512449.1|RLE512449 Rana lessonae transposon lesBam, clone 1 38 8.3
35emb|AJ512448.1|RLE512448 Rana lessonae transposon lesBam 38 8.3
36emb|AJ512444.1|ITA512444 Rana lessonae transposon ItBam, clone 3 38 8.3
37emb|AJ511658.1|RRI511658 Rana ridibunda transposon ridBam 38 8.3
38emb|AJ511657.1|RPE511657 Rana perezi transposon perBam 38 8.3
39gb|AC093182.3| Homo sapiens chromosome 7 clone RP11-19B3, comple... 38 8.3
40emb|BX663605.6| Zebrafish DNA sequence from clone DKEY-14I19 in ... 38 8.3
41gb|AC109506.21| Mus musculus chromosome 7, clone RP23-344G21, co... 38 8.3
42gb|AY939862.1| Koi herpesvirus DNA polymerase gene, complete cds 38 8.3
43gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 38 8.3
44gb|AC009518.9| Homo sapiens chromosome 7 clone RP11-193I17, comp... 38 8.3
45gb|AC147103.3| Pan troglodytes BAC clone RP43-31L11 from chromos... 38 8.3
46gb|AC007673.7|AC007673 Homo sapiens, clone RP11-99A1, complete s... 38 8.3
47gb|AC125766.5| Homo sapiens 3 BAC RP11-62F21 (Roswell Park Cance... 38 8.3
48emb|BX664619.13| Mouse DNA sequence from clone RP23-349B9 on chr... 38 8.3
49dbj|AB017066.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 38 8.3
50emb|X95820.1|STINVERTN S.tuberosum invertase gene (1911bp) 38 8.3
51dbj|AP003499.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 38 8.3
52emb|BX005088.4| Zebrafish DNA sequence from clone CH211-160E15 i... 38 8.3
53gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 38 8.3
54gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 38 8.3
55emb|Z81485.1|CEC49F5 Caenorhabditis elegans Cosmid C49F5, comple... 38 8.3
56dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, comp... 38 8.3
57gb|AC115008.7| Mus musculus chromosome 3, clone RP24-189F12, com... 38 8.3 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  323 bits (163), Expect = 1e-85
 Identities = 166/167 (99%)
 Strand = Plus / Minus

                                                                           
Query: 5       ggcacgcgaaaaaacataactatcgagttcaaaattcataaatctcaacagtttgatcat 64
               |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3430768 ggcaggcgaaaaaacataactatcgagttcaaaattcataaatctcaacagtttgatcat 3430709

                                                                           
Query: 65      ccgcagcaccagcagctcagagtagcaaagcatttaaactgggtactcaaaatatctgcc 124
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3430708 ccgcagcaccagcagctcagagtagcaaagcatttaaactgggtactcaaaatatctgcc 3430649

                                                              
Query: 125     acaaaactcaggacaagtacagaaactgggaaagctatcaggtgagg 171
               |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3430648 acaaaactcaggacaagtacagaaactgggaaagctatcaggtgagg 3430602
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  323 bits (163), Expect = 1e-85
 Identities = 166/167 (99%)
 Strand = Plus / Minus

                                                                           
Query: 5       ggcacgcgaaaaaacataactatcgagttcaaaattcataaatctcaacagtttgatcat 64
               |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3430709 ggcaggcgaaaaaacataactatcgagttcaaaattcataaatctcaacagtttgatcat 3430650

                                                                           
Query: 65      ccgcagcaccagcagctcagagtagcaaagcatttaaactgggtactcaaaatatctgcc 124
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3430649 ccgcagcaccagcagctcagagtagcaaagcatttaaactgggtactcaaaatatctgcc 3430590

                                                              
Query: 125     acaaaactcaggacaagtacagaaactgggaaagctatcaggtgagg 171
               |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3430589 acaaaactcaggacaagtacagaaactgggaaagctatcaggtgagg 3430543
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>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 116371

 Score =  323 bits (163), Expect = 1e-85
 Identities = 166/167 (99%)
 Strand = Plus / Plus

                                                                          
Query: 5      ggcacgcgaaaaaacataactatcgagttcaaaattcataaatctcaacagtttgatcat 64
              |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101151 ggcaggcgaaaaaacataactatcgagttcaaaattcataaatctcaacagtttgatcat 101210

                                                                          
Query: 65     ccgcagcaccagcagctcagagtagcaaagcatttaaactgggtactcaaaatatctgcc 124
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101211 ccgcagcaccagcagctcagagtagcaaagcatttaaactgggtactcaaaatatctgcc 101270

                                                             
Query: 125    acaaaactcaggacaagtacagaaactgggaaagctatcaggtgagg 171
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101271 acaaaactcaggacaagtacagaaactgggaaagctatcaggtgagg 101317
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>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 137936

 Score =  323 bits (163), Expect = 1e-85
 Identities = 166/167 (99%)
 Strand = Plus / Minus

                                                                          
Query: 5      ggcacgcgaaaaaacataactatcgagttcaaaattcataaatctcaacagtttgatcat 64
              |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109821 ggcaggcgaaaaaacataactatcgagttcaaaattcataaatctcaacagtttgatcat 109762

                                                                          
Query: 65     ccgcagcaccagcagctcagagtagcaaagcatttaaactgggtactcaaaatatctgcc 124
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109761 ccgcagcaccagcagctcagagtagcaaagcatttaaactgggtactcaaaatatctgcc 109702

                                                             
Query: 125    acaaaactcaggacaagtacagaaactgggaaagctatcaggtgagg 171
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109701 acaaaactcaggacaagtacagaaactgggaaagctatcaggtgagg 109655
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>dbj|AK060925.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-H11, full
            insert sequence
          Length = 1468

 Score =  315 bits (159), Expect = 2e-83
 Identities = 165/167 (98%)
 Strand = Plus / Minus

                                                                        
Query: 5    ggcacgcgaaaaaacataactatcgagttcaaaattcataaatctcaacagtttgatcat 64
            |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1420 ggcaggcgaaaaaacataactatcgagttcaaaattcataaatctcaacagcttgatcat 1361

                                                                        
Query: 65   ccgcagcaccagcagctcagagtagcaaagcatttaaactgggtactcaaaatatctgcc 124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1360 ccgcagcaccagcagctcagagtagcaaagcatttaaactgggtactcaaaatatctgcc 1301

                                                           
Query: 125  acaaaactcaggacaagtacagaaactgggaaagctatcaggtgagg 171
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1300 acaaaactcaggacaagtacagaaactgggaaagctatcaggtgagg 1254
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>dbj|D12630.1|RICRPL3A Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein L3,
            complete cds
          Length = 1368

 Score =  311 bits (157), Expect = 4e-82
 Identities = 157/157 (100%)
 Strand = Plus / Minus

                                                                        
Query: 15   aaaacataactatcgagttcaaaattcataaatctcaacagtttgatcatccgcagcacc 74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1368 aaaacataactatcgagttcaaaattcataaatctcaacagtttgatcatccgcagcacc 1309

                                                                        
Query: 75   agcagctcagagtagcaaagcatttaaactgggtactcaaaatatctgccacaaaactca 134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1308 agcagctcagagtagcaaagcatttaaactgggtactcaaaatatctgccacaaaactca 1249

                                                 
Query: 135  ggacaagtacagaaactgggaaagctatcaggtgagg 171
            |||||||||||||||||||||||||||||||||||||
Sbjct: 1248 ggacaagtacagaaactgggaaagctatcaggtgagg 1212
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>gb|AF346004.1|AF346004 Lolium perenne L3 ribosomal protein mRNA, partial cds
          Length = 855

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                       
Query: 17  aacataactatcgagttcaaaattcataaatctcaacagtttgatcatccgcagcaccag 76
           ||||| |||||| ||||||||||||||||| ||||||||||  | |||||||||||  ||
Sbjct: 828 aacattactatcaagttcaaaattcataaacctcaacagttcaaccatccgcagcagtag 769

                           
Query: 77  cagctcagagtagcaa 92
           ||||||||||| ||||
Sbjct: 768 cagctcagagtggcaa 753
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>ref|XM_540231.2| PREDICTED: Canis familiaris similar to RAB11 family interacting
            protein 5 (class I) isoform 1 (LOC483115), mRNA
          Length = 3978

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 65   ccgcagcaccagcagctcagag 86
            ||||||||||||||||||||||
Sbjct: 1173 ccgcagcaccagcagctcagag 1194
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>gb|AC127898.6| Homo sapiens 12 BAC RP11-373K20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 159557

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 74    cagcagctcagagtagcaaag 94
             |||||||||||||||||||||
Sbjct: 69245 cagcagctcagagtagcaaag 69225
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>gb|AC167724.6| Mus musculus 10 BAC RP23-331P17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 230186

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    tcaaaatatctgccacaaaa 130
              ||||||||||||||||||||
Sbjct: 223671 tcaaaatatctgccacaaaa 223652
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>gb|AC118212.7| Mus musculus chromosome 6, clone RP24-170E4, complete sequence
          Length = 190612

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     agcaccagcagctcagagta 88
              ||||||||||||||||||||
Sbjct: 158094 agcaccagcagctcagagta 158113
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>gb|AC131705.4| Mus musculus BAC clone RP24-130N16 from chromosome 18, complete
             sequence
          Length = 122446

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   gggaaagctatcaggtgagg 171
             ||||||||||||||||||||
Sbjct: 21232 gggaaagctatcaggtgagg 21251
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>gb|AC121994.4| Mus musculus BAC clone RP24-301N9 from chromosome 6, complete sequence
          Length = 165506

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    agcaccagcagctcagagta 88
             ||||||||||||||||||||
Sbjct: 14410 agcaccagcagctcagagta 14429
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>gb|AC114652.7| Mus musculus chromosome 18, clone RP24-156O17, complete sequence
          Length = 148737

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    gggaaagctatcaggtgagg 171
              ||||||||||||||||||||
Sbjct: 144278 gggaaagctatcaggtgagg 144297
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>emb|BX511027.20| Zebrafish DNA sequence from clone CH211-281P14 in linkage group 14,
              complete sequence
          Length = 198761

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    caaaatatctgccacaaaac 131
              ||||||||||||||||||||
Sbjct: 155822 caaaatatctgccacaaaac 155803
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>gb|AC155327.3| Mus musculus 6 BAC RP24-176G23 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 148183

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   tcaaaatatctgccacaaaa 130
             ||||||||||||||||||||
Sbjct: 63423 tcaaaatatctgccacaaaa 63442
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>ref|XM_458326.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C15939g)
           partial mRNA
          Length = 2187

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 135 ggacaagtacagaaactgg 153
           |||||||||||||||||||
Sbjct: 532 ggacaagtacagaaactgg 514
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 148     aactgggaaagctatcagg 166
               |||||||||||||||||||
Sbjct: 3414376 aactgggaaagctatcagg 3414358
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 148     aactgggaaagctatcagg 166
               |||||||||||||||||||
Sbjct: 3414943 aactgggaaagctatcagg 3414925
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>gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome 14, complete sequence
          Length = 225868

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 121   tgccacaaaactcaggaca 139
             |||||||||||||||||||
Sbjct: 68644 tgccacaaaactcaggaca 68662
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>gb|AC147038.2| Pan troglodytes BAC clone RP43-112D23 from 7, complete sequence
          Length = 192615

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 137   acaagtacagaaactggga 155
             |||||||||||||||||||
Sbjct: 48623 acaagtacagaaactggga 48641
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>gb|AC149571.3| Rhinolophus ferrumequinum clone VMRC7-305L23, complete sequence
          Length = 190426

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 137    acaagtacagaaactggga 155
              |||||||||||||||||||
Sbjct: 127737 acaagtacagaaactggga 127719
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>gb|AC113305.7| Mus musculus chromosome 10, clone RP23-433H22, complete sequence
          Length = 203296

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 124   cacaaaactcaggacaagt 142
             |||||||||||||||||||
Sbjct: 27148 cacaaaactcaggacaagt 27166
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>ref|XM_754988.1| Ustilago maydis 521 hypothetical protein (UM03934.1) partial mRNA
          Length = 3138

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 62   catccgcagcaccagcagc 80
            |||||||||||||||||||
Sbjct: 1534 catccgcagcaccagcagc 1516
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>gb|AC126932.4| Mus musculus BAC clone RP24-80G20 from chromosome 3, complete sequence
          Length = 214712

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 63     atccgcagcaccagcagct 81
              |||||||||||||||||||
Sbjct: 200546 atccgcagcaccagcagct 200564
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>gb|AC122056.4| Mus musculus BAC clone RP24-466A3 from chromosome 14, complete sequence
          Length = 179685

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 121   tgccacaaaactcaggaca 139
             |||||||||||||||||||
Sbjct: 96303 tgccacaaaactcaggaca 96285
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>emb|BX323049.20| Zebrafish DNA sequence from clone DKEY-30L22 in linkage group 9, complete
              sequence
          Length = 214040

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 40     tcataaatctcaacagttt 58
              |||||||||||||||||||
Sbjct: 136022 tcataaatctcaacagttt 136040
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>emb|AL358453.8| Human DNA sequence from clone RP11-115M14 on chromosome 1 Contains a
            cytochrome c oxidase subunit VIa polypeptide 1 (COX6A1)
            pseudogene, complete sequence
          Length = 108934

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 113  aaaatatctgccacaaaac 131
            |||||||||||||||||||
Sbjct: 5632 aaaatatctgccacaaaac 5614
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>ref|XM_789528.1| PREDICTED: Strongylocentrotus purpuratus similar to Pumilio homolog 1
            (LOC589897), mRNA
          Length = 7881

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 62   catccgcagcaccagcagc 80
            |||||||||||||||||||
Sbjct: 1036 catccgcagcaccagcagc 1054
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>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces
               hansenii
          Length = 1592360

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 135     ggacaagtacagaaactgg 153
               |||||||||||||||||||
Sbjct: 1304286 ggacaagtacagaaactgg 1304304
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 59      gatcatccgcagcaccagc 77
               |||||||||||||||||||
Sbjct: 5199153 gatcatccgcagcaccagc 5199171
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>emb|BX890576.12| Zebrafish DNA sequence from clone DKEY-203O14 in linkage group 18,
              complete sequence
          Length = 172599

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 86     gtagcaaagcatttaaact 104
              |||||||||||||||||||
Sbjct: 130835 gtagcaaagcatttaaact 130853
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>emb|AJ512450.1|RLE512450 Rana lessonae transposon lesBam, clone 2
          Length = 572

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 67  gcagcaccagcagctcaga 85
           |||||||||||||||||||
Sbjct: 260 gcagcaccagcagctcaga 278
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>emb|AJ512449.1|RLE512449 Rana lessonae transposon lesBam, clone 1
          Length = 572

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 67  gcagcaccagcagctcaga 85
           |||||||||||||||||||
Sbjct: 260 gcagcaccagcagctcaga 278
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>emb|AJ512448.1|RLE512448 Rana lessonae transposon lesBam
          Length = 520

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 67  gcagcaccagcagctcaga 85
           |||||||||||||||||||
Sbjct: 229 gcagcaccagcagctcaga 247
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>emb|AJ512444.1|ITA512444 Rana lessonae transposon ItBam, clone 3
          Length = 570

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 67  gcagcaccagcagctcaga 85
           |||||||||||||||||||
Sbjct: 259 gcagcaccagcagctcaga 277
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>emb|AJ511658.1|RRI511658 Rana ridibunda transposon ridBam
          Length = 504

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 67  gcagcaccagcagctcaga 85
           |||||||||||||||||||
Sbjct: 224 gcagcaccagcagctcaga 242
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>emb|AJ511657.1|RPE511657 Rana perezi transposon perBam
          Length = 527

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 67  gcagcaccagcagctcaga 85
           |||||||||||||||||||
Sbjct: 239 gcagcaccagcagctcaga 257
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>gb|AC093182.3| Homo sapiens chromosome 7 clone RP11-19B3, complete sequence
          Length = 155164

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 137   acaagtacagaaactggga 155
             |||||||||||||||||||
Sbjct: 32365 acaagtacagaaactggga 32347
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>emb|BX663605.6| Zebrafish DNA sequence from clone DKEY-14I19 in linkage group 7, complete
              sequence
          Length = 170764

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 137    acaagtacagaaactggga 155
              |||||||||||||||||||
Sbjct: 128030 acaagtacagaaactggga 128048
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>gb|AC109506.21| Mus musculus chromosome 7, clone RP23-344G21, complete sequence
          Length = 227676

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 130   actcaggacaagtacagaa 148
             |||||||||||||||||||
Sbjct: 53118 actcaggacaagtacagaa 53100
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>gb|AY939862.1| Koi herpesvirus DNA polymerase gene, complete cds
          Length = 5130

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 73   ccagcagctcagagtagca 91
            |||||||||||||||||||
Sbjct: 1369 ccagcagctcagagtagca 1351
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 137    acaagtacagaaactggga 155
              |||||||||||||||||||
Sbjct: 743581 acaagtacagaaactggga 743563
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>gb|AC009518.9| Homo sapiens chromosome 7 clone RP11-193I17, complete sequence
          Length = 176209

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 137   acaagtacagaaactggga 155
             |||||||||||||||||||
Sbjct: 48186 acaagtacagaaactggga 48204
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>gb|AC147103.3| Pan troglodytes BAC clone RP43-31L11 from chromosome 7, complete
             sequence
          Length = 222089

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 137   acaagtacagaaactggga 155
             |||||||||||||||||||
Sbjct: 31684 acaagtacagaaactggga 31666
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>gb|AC007673.7|AC007673 Homo sapiens, clone RP11-99A1, complete sequence
          Length = 163898

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 139   aagtacagaaactgggaaa 157
             |||||||||||||||||||
Sbjct: 80666 aagtacagaaactgggaaa 80648
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>gb|AC125766.5| Homo sapiens 3 BAC RP11-62F21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 119300

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 113   aaaatatctgccacaaaac 131
             |||||||||||||||||||
Sbjct: 37341 aaaatatctgccacaaaac 37359
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>emb|BX664619.13| Mouse DNA sequence from clone RP23-349B9 on chromosome 11, complete
             sequence
          Length = 154608

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    ataactatcgagttcaaaa 38
             |||||||||||||||||||
Sbjct: 75156 ataactatcgagttcaaaa 75138
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>dbj|AB017066.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MGN6
          Length = 61380

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    aaaaacataactatcgagt 32
             |||||||||||||||||||
Sbjct: 19656 aaaaacataactatcgagt 19674
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>emb|X95820.1|STINVERTN S.tuberosum invertase gene (1911bp)
          Length = 1911

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 30   agttcaaaattcataaatctcaa 52
            |||||||||||||||||| ||||
Sbjct: 1394 agttcaaaattcataaatttcaa 1416
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>dbj|AP003499.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-178H8, complete
             sequence
          Length = 193227

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 139   aagtacagaaactgggaaa 157
             |||||||||||||||||||
Sbjct: 18603 aagtacagaaactgggaaa 18585
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>emb|BX005088.4| Zebrafish DNA sequence from clone CH211-160E15 in linkage group 9,
              complete sequence
          Length = 193489

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 40     tcataaatctcaacagttt 58
              |||||||||||||||||||
Sbjct: 110536 tcataaatctcaacagttt 110518
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 148     aactgggaaagctatcagg 166
               |||||||||||||||||||
Sbjct: 3623445 aactgggaaagctatcagg 3623427
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 148     aactgggaaagctatcagg 166
               |||||||||||||||||||
Sbjct: 3414249 aactgggaaagctatcagg 3414231
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>emb|Z81485.1|CEC49F5 Caenorhabditis elegans Cosmid C49F5, complete sequence
          Length = 39848

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    ttcaaaattcataaatctc 50
             |||||||||||||||||||
Sbjct: 17259 ttcaaaattcataaatctc 17241
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>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence
          Length = 949626

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 32     ttcaaaattcataaatctcaacagttt 58
              ||||| ||||| |||||||||||||||
Sbjct: 924143 ttcaagattcaaaaatctcaacagttt 924169
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>gb|AC115008.7| Mus musculus chromosome 3, clone RP24-189F12, complete sequence
          Length = 154667

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    atccgcagcaccagcagct 81
             |||||||||||||||||||
Sbjct: 28217 atccgcagcaccagcagct 28235


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,855,314
Number of Sequences: 3902068
Number of extensions: 1855314
Number of successful extensions: 142119
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 141660
Number of HSP's gapped (non-prelim): 459
length of query: 171
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 149
effective length of database: 17,147,199,772
effective search space: 2554932766028
effective search space used: 2554932766028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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