>emb|AL049738.4|HSJ944N18 Human DNA sequence from clone RP5-944N18 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 122383

 Score = 40.1 bits (20), Expect = 0.30
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    tttcttacttgttacccaaa 34
             ||||||||||||||||||||
Sbjct: 16183 tttcttacttgttacccaaa 16202

>gb|AY454255.1| Small ruminant lentivirus isolate SNCR5588 pol protein (pol) gene,
           partial cds
          Length = 1130

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 8   tggaatctttcttacttgt 26
           |||||||||||||||||||
Sbjct: 152 tggaatctttcttacttgt 134

>gb|AC115050.23| Mus musculus chromosome 3, clone RP24-338K10, complete sequence
          Length = 163265

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     ctgggaatggaatctttct 19
             |||||||||||||||||||
Sbjct: 94164 ctgggaatggaatctttct 94182

>dbj|AB025603.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F17P19
          Length = 48420

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    tttcttacttgttacccaa 33
             |||||||||||||||||||
Sbjct: 40705 tttcttacttgttacccaa 40687

>gb|AC154616.2| Mus musculus BAC clone RP23-319O9 from 14, complete sequence
          Length = 179927

 Score = 38.2 bits (19), Expect = 1.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      ctgggaatggaatctttct 19
              |||||||||||||||||||
Sbjct: 124661 ctgggaatggaatctttct 124643

>gb|AC003677.1| Human P1 356C6 (h49) chromosome 5q, complete sequence
          Length = 82237

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 2     tgggaatggaatctttct 19
             ||||||||||||||||||
Sbjct: 10113 tgggaatggaatctttct 10096

>emb|AL031055.1|HS28H20 Human DNA sequence from clone RP1-28H20 on chromosome 20q13.1, complete
              sequence
          Length = 127418

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 19     ttacttgttacccaaaga 36
              ||||||||||||||||||
Sbjct: 103444 ttacttgttacccaaaga 103427

>ref|XM_806864.1| Trypanosoma cruzi strain CL Brener cysteine proteinase
          (Tc00.1047053508317.10) partial mRNA
          Length = 1179

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                            
Query: 15 tttcttacttgttaccca 32
          ||||||||||||||||||
Sbjct: 69 tttcttacttgttaccca 86

>emb|BX890603.17| Zebrafish DNA sequence from clone DKEYP-19G9 in linkage group 23,
             complete sequence
          Length = 184711

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 6     aatggaatctttcttact 23
             ||||||||||||||||||
Sbjct: 69066 aatggaatctttcttact 69049

>emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chromosome 9 Contains three
             novel genes, the 5' end of a novel gene, a novel
             pseudogene and seven CpG islands, complete sequence
          Length = 165696

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 17    tcttacttgttacccaaagagt 38
             |||||||||| |||||||||||
Sbjct: 43864 tcttacttgtgacccaaagagt 43843

>emb|AL157826.8| Human DNA sequence from clone RP11-176P17 on chromosome 9p22.3-24.1
            Contains part of a variant of the PTPRD gene for protein
            tyrosine phosphatase, receptor type, D (HPTP, PTPD,
            HPTPD), complete sequence
          Length = 149087

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 10   gaatctttcttacttgtt 27
            ||||||||||||||||||
Sbjct: 4360 gaatctttcttacttgtt 4343

>gb|AC015878.7| Homo sapiens, clone RP11-296E23, complete sequence
          Length = 160569

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 22     cttgttacccaaagagtg 39
              ||||||||||||||||||
Sbjct: 141656 cttgttacccaaagagtg 141639

>gb|AC093416.2| Homo sapiens chromosome 3 clone RP11-659P16, complete sequence
          Length = 189308

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 11     aatctttcttacttgtta 28
              ||||||||||||||||||
Sbjct: 129557 aatctttcttacttgtta 129574

>gb|AC009009.5| Homo sapiens chromosome 5 clone P1_1246B1, complete sequence
          Length = 79297

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 2     tgggaatggaatctttct 19
             ||||||||||||||||||
Sbjct: 63841 tgggaatggaatctttct 63824

>gb|AC156618.5| Mus musculus chromosome 3, clone RP24-372J15, complete sequence
          Length = 171545

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 17     tcttacttgttacccaaagagt 38
              |||||||| |||||||||||||
Sbjct: 129163 tcttactttttacccaaagagt 129184

>dbj|AK015999.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930539J05 product:unclassifiable, full
           insert sequence
          Length = 1406

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 17  tcttacttgttacccaaagagt 38
           |||||||| |||||||||||||
Sbjct: 235 tcttactttttacccaaagagt 214

>dbj|BS000103.1| Pan troglodytes chromosome 22 clone:PTB-031J04, map 22, complete
              sequences
          Length = 164274

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 13     tctttcttacttgttacc 30
              ||||||||||||||||||
Sbjct: 148415 tctttcttacttgttacc 148398

>dbj|AP001693.1| Homo sapiens genomic DNA, chromosome 21q, section 37/105
          Length = 340000

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 13     tctttcttacttgttacc 30
              ||||||||||||||||||
Sbjct: 245965 tctttcttacttgttacc 245948

>gb|AF087149.1|HSTOP2B07 Homo sapiens DNA topoisomerase II beta (TOP2B) gene, exons 11 through
            15
          Length = 2910

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 11   aatctttcttacttgtta 28
            ||||||||||||||||||
Sbjct: 1876 aatctttcttacttgtta 1859

>gb|AC002228.1|AC002228 Homo sapiens (subclone 2_b5 from P1 H49) DNA sequence, complete
           sequence
          Length = 3275

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 2   tgggaatggaatctttct 19
           ||||||||||||||||||
Sbjct: 635 tgggaatggaatctttct 652

>gb|AC001038.1|HSAC001038 Homo sapiens (subclone 2_h2 from P1 H49) DNA sequence, complete
            sequence
          Length = 3382

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 2    tgggaatggaatctttct 19
            ||||||||||||||||||
Sbjct: 1413 tgggaatggaatctttct 1396

>dbj|AP000221.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region,
             clone:S672, complete sequence
          Length = 89323

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 13    tctttcttacttgttacc 30
             ||||||||||||||||||
Sbjct: 45759 tctttcttacttgttacc 45742

>dbj|AP000137.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone
            B2291C14-R44F3, segment 2/10, complete sequence
          Length = 100000

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 13   tctttcttacttgttacc 30
            ||||||||||||||||||
Sbjct: 6261 tctttcttacttgttacc 6244

>dbj|AP000085.1| Homo sapiens genomic DNA of 21q22.1, APP related, B2291C14-T1533
            region, segment 2/7
          Length = 100000

 Score = 36.2 bits (18), Expect = 4.6
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 13   tctttcttacttgttacc 30
            ||||||||||||||||||
Sbjct: 6261 tctttcttacttgttacc 6244


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 331,967
Number of Sequences: 3902068
Number of extensions: 331967
Number of successful extensions: 89209
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89167
Number of HSP's gapped (non-prelim): 42
length of query: 41
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 21
effective length of database: 17,155,003,908
effective search space: 360255082068
effective search space used: 360255082068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)