>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II
          Length = 1217

 Score = 52.0 bits (26), Expect = 1e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 23   acattcatgggggatcaatatcatga 48
            ||||||||||||||||||||||||||
Sbjct: 1200 acattcatgggggatcaatatcatga 1175

>gb|AC008045.5|AC008045 Homo sapiens chromosome 14q31 clone CTD-2552H2 containing neurexin III
             gene, partial cds, complete sequence
          Length = 188078

 Score = 40.1 bits (20), Expect = 0.40
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    gaacatacacattcatgggg 34
             ||||||||||||||||||||
Sbjct: 30584 gaacatacacattcatgggg 30603

>emb|AL353810.9| Human DNA sequence from clone RP11-261H15 on chromosome 9, complete
             sequence
          Length = 111330

 Score = 38.2 bits (19), Expect = 1.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    gaacatacacattcatggg 33
             |||||||||||||||||||
Sbjct: 63949 gaacatacacattcatggg 63967

>gb|AC159746.5| Mus musculus 6 BAC RP23-437F11 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 171039

 Score = 38.2 bits (19), Expect = 1.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     ggaccaaatttgagaacat 20
             |||||||||||||||||||
Sbjct: 59595 ggaccaaatttgagaacat 59577

>gb|AC150694.2| Bos taurus  BAC CH240-144A17 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 163920

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 10     tttgagaacatacacatt 27
              ||||||||||||||||||
Sbjct: 116915 tttgagaacatacacatt 116932

>gb|DQ498331.1| Homo sapiens clone HIV-1 CV54 genomic sequence
          Length = 750

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 4   accaaatttgagaacata 21
           ||||||||||||||||||
Sbjct: 454 accaaatttgagaacata 471

>gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosome 6, complete sequence
          Length = 182955

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 18     catacacattcatgggggatca 39
              |||||| |||||||||||||||
Sbjct: 111268 catacagattcatgggggatca 111289

>gb|AC135292.2| Mus musculus BAC clone RP23-153N21 from chromosome 15, complete sequence
          Length = 206967

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 9      atttgagaacatacacat 26
              ||||||||||||||||||
Sbjct: 175053 atttgagaacatacacat 175036

>gb|AC122395.4| Mus musculus BAC clone RP24-86H17 from chromosome 9, complete sequence
          Length = 203891

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 9      atttgagaacatacacat 26
              ||||||||||||||||||
Sbjct: 120232 atttgagaacatacacat 120215

>gb|AC090711.3| Homo sapiens chromosome 8 clone RP11-89H1 map 8q21-q23, complete
             sequence
          Length = 153053

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 4     accaaatttgagaacata 21
             ||||||||||||||||||
Sbjct: 49600 accaaatttgagaacata 49617

>emb|AL450997.5| Human DNA sequence from clone RP5-1086I18 on chromosome 1 Contains part
             of the KCND3 gene for potassium voltage-gated channel
             Shal-related subfamily member 3 and a novel gene, complete
             sequence
          Length = 126692

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 12    tgagaacatacacattca 29
             ||||||||||||||||||
Sbjct: 97486 tgagaacatacacattca 97503

>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 10     tttgagaacatacacatt 27
              ||||||||||||||||||
Sbjct: 217957 tttgagaacatacacatt 217974

>gb|AC126178.6| Homo sapiens 12 BAC RP11-567C2 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 127439

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 14   agaacatacacattcatg 31
            ||||||||||||||||||
Sbjct: 9284 agaacatacacattcatg 9301

>gb|AC087110.3| Homo sapiens chromosome 8, clone CTD-2033B22, complete sequence
          Length = 145544

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 4     accaaatttgagaacata 21
             ||||||||||||||||||
Sbjct: 70147 accaaatttgagaacata 70130

>gb|AC150660.4| Mus musculus BAC clone RP23-41F9 from chromosome 15, complete sequence
          Length = 229655

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 9      atttgagaacatacacat 26
              ||||||||||||||||||
Sbjct: 211277 atttgagaacatacacat 211294

>gb|AC092967.5| Homo sapiens 3 BAC RP11-521A24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 179848

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 4      accaaatttgagaacata 21
              ||||||||||||||||||
Sbjct: 165764 accaaatttgagaacata 165747

>emb|AL627327.29| Mouse DNA sequence from clone RP23-62O17 on chromosome 4, complete
              sequence
          Length = 249562

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 18     catacacattcatggggg 35
              ||||||||||||||||||
Sbjct: 236376 catacacattcatggggg 236393

>emb|Z81533.1|CEF36G9 Caenorhabditis elegans Cosmid F36G9, complete sequence
          Length = 37704

 Score = 36.2 bits (18), Expect = 6.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 6     caaatttgagaacatacacatt 27
             ||||||||||||| ||||||||
Sbjct: 13776 caaatttgagaacttacacatt 13797


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 423,033
Number of Sequences: 3902068
Number of extensions: 423033
Number of successful extensions: 118552
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118503
Number of HSP's gapped (non-prelim): 49
length of query: 48
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 28
effective length of database: 17,155,003,908
effective search space: 480340109424
effective search space used: 480340109424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)