>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                            
Query: 188      ggatactggcagtcaatctctttcactccttggctccttccaaagtaccaatctccaaca 247
                ||||||| |||||||||||||||||||  || ||| ||  |||| |||||||| ||||||
Sbjct: 38800845 ggatactcgcagtcaatctctttcactgttttgcttctctcaaaataccaatccccaaca 38800904

                     
Query: 248      acctt 252
                 ||||
Sbjct: 38800905 gcctt 38800909



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 173      catgttgggttgcacggatactggcagtcaatctctttcact 214
                ||||| ||||| || ||||||| |||||| ||||||||||||
Sbjct: 38794237 catgtggggttacaaggatactcgcagtcgatctctttcact 38794278



 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 172      gcatgttgggttgcacggata 192
                |||||||||||||||||||||
Sbjct: 43059269 gcatgttgggttgcacggata 43059289

>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1078G07
          Length = 199457

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 188   ggatactggcagtcaatctctttcactccttggctccttccaaagtaccaatctccaaca 247
             ||||||| |||||||||||||||||||  || ||| ||  |||| |||||||| ||||||
Sbjct: 73727 ggatactcgcagtcaatctctttcactgttttgcttctctcaaaataccaatccccaaca 73786

                  
Query: 248   acctt 252
              ||||
Sbjct: 73787 gcctt 73791



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 173   catgttgggttgcacggatactggcagtcaatctctttcact 214
             ||||| ||||| || ||||||| |||||| ||||||||||||
Sbjct: 67119 catgtggggttacaaggatactcgcagtcgatctctttcact 67160

>ref|NM_190233.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1221

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 173  catgttgggttgcacggatactggcagtcaatctctttcact 214
            ||||| ||||| || ||||||| |||||| ||||||||||||
Sbjct: 1199 catgtggggttacaaggatactcgcagtcgatctctttcact 1158

>gb|AC116106.18| Mus musculus chromosome 16, clone RP23-23D5, complete sequence
          Length = 252718

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 209    ttcactccttggctccttccaa 230
              ||||||||||||||||||||||
Sbjct: 154837 ttcactccttggctccttccaa 154816

>gb|AC068812.13|AC068812 Homo sapiens chromosome N/A clone RP11-201E13, complete sequence
          Length = 177862

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 258   tgttcttatttccaagccttgg 279
             ||||||||||||||||||||||
Sbjct: 94010 tgttcttatttccaagccttgg 93989

>emb|AL121775.3|CNS01DSG Human chromosome 14 DNA sequence BAC R-552K16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172576

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 258    tgttcttatttccaagccttgg 279
              ||||||||||||||||||||||
Sbjct: 139411 tgttcttatttccaagccttgg 139432

>ref|NM_189490.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 876

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 172 gcatgttgggttgcacggata 192
           |||||||||||||||||||||
Sbjct: 837 gcatgttgggttgcacggata 817

>gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CIT987-SK37914  ~complete genomic
             sequence, complete sequence
          Length = 161580

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 225   ttccaaagtaccaatctccaacaac 249
             ||||||| |||||||||||||||||
Sbjct: 22024 ttccaaattaccaatctccaacaac 22048

>gb|AC133916.2| Homo sapiens chromosome 16 clone RP11-135K11, complete sequence
          Length = 169142

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 225   ttccaaagtaccaatctccaacaac 249
             ||||||| |||||||||||||||||
Sbjct: 70749 ttccaaattaccaatctccaacaac 70773

>gb|AC138915.2| Homo sapiens chromosome 16 clone RP11-626K17, complete sequence
          Length = 180893

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 225   ttccaaagtaccaatctccaacaac 249
             ||||||| |||||||||||||||||
Sbjct: 92244 ttccaaattaccaatctccaacaac 92268

>gb|AC138511.2| Homo sapiens chromosome 16 clone RP11-22F7, complete sequence
          Length = 149037

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 225   ttccaaagtaccaatctccaacaac 249
             ||||||| |||||||||||||||||
Sbjct: 93286 ttccaaattaccaatctccaacaac 93262

>gb|AC022272.6| Homo sapiens BAC clone RP11-563E2 from 4, complete sequence
          Length = 186535

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     caatccagtatactccctcca 64
              |||||||||||||||||||||
Sbjct: 136215 caatccagtatactccctcca 136235

>gb|AC134305.3| Homo sapiens chromosome 16 clone RP11-105I8, complete sequence
          Length = 165873

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 225   ttccaaagtaccaatctccaacaac 249
             ||||||| |||||||||||||||||
Sbjct: 85567 ttccaaattaccaatctccaacaac 85591

>gb|AC073218.6| Homo sapiens BAC clone RP11-529E15 from 2, complete sequence
          Length = 150263

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 237   aatctccaacaacctttgcaatgtt 261
             ||||||||||| |||||||||||||
Sbjct: 79473 aatctccaacagcctttgcaatgtt 79449

>gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, complete sequence
          Length = 196550

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 225    ttccaaagtaccaatctccaacaac 249
              ||||||| |||||||||||||||||
Sbjct: 183743 ttccaaattaccaatctccaacaac 183719

>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0459B04
          Length = 142475

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 172   gcatgttgggttgcacggata 192
             |||||||||||||||||||||
Sbjct: 56298 gcatgttgggttgcacggata 56318

>gb|AC136433.3| Homo sapiens chromosome 16 clone RP11-21C14, complete sequence
          Length = 164765

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 225   ttccaaagtaccaatctccaacaac 249
             ||||||| |||||||||||||||||
Sbjct: 56932 ttccaaattaccaatctccaacaac 56956

>dbj|AK064109.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G02, full
            insert sequence
          Length = 1483

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 172  gcatgttgggttgcacggata 192
            |||||||||||||||||||||
Sbjct: 1289 gcatgttgggttgcacggata 1269

>gb|AY110511.1| Zea mays CL5312_1 mRNA sequence
          Length = 1791

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 170 ttgcatgttgggttgcacggatactggcagtcaatct 206
           ||||| ||||||||||| |||||| |||| |||||||
Sbjct: 386 ttgcaagttgggttgcagggatacgggcaatcaatct 422

>gb|AY106613.1| Zea mays PCO094715 mRNA sequence
          Length = 1106

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 170 ttgcatgttgggttgcacggatactggcagtcaatct 206
           ||||| ||||||||||| |||||| |||| |||||||
Sbjct: 754 ttgcaagttgggttgcagggatacgggcaatcaatct 718

>gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, complete sequence
          Length = 184294

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 225    ttccaaagtaccaatctccaacaac 249
              ||||||| |||||||||||||||||
Sbjct: 167407 ttccaaattaccaatctccaacaac 167383

>gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, complete sequence
          Length = 161397

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 225   ttccaaagtaccaatctccaacaac 249
             ||||||| |||||||||||||||||
Sbjct: 26357 ttccaaattaccaatctccaacaac 26381

>emb|BX572094.1| Prochlorococcus marinus MED4 complete genome; segment 5/5
          Length = 262202

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     atccatattaactgatgatg 87
              ||||||||||||||||||||
Sbjct: 173266 atccatattaactgatgatg 173247

>gb|AC113435.14| Pan troglodytes clone rp43-153p22, complete sequence
          Length = 161703

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 225    ttccaaagtaccaatctccaacaa 248
              ||||||| ||||||||||||||||
Sbjct: 109892 ttccaaattaccaatctccaacaa 109869

>gb|AC025471.6| Homo sapiens chromosome 5 clone RP11-138C1, complete sequence
          Length = 148607

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      agaattgtttttcttgaatc 22
              ||||||||||||||||||||
Sbjct: 110892 agaattgtttttcttgaatc 110873

>emb|BX537269.8| Zebrafish DNA sequence from clone DKEY-181H1 in linkage group 11,
            complete sequence
          Length = 73125

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   agtgaatattaacacaatcc 49
            ||||||||||||||||||||
Sbjct: 4540 agtgaatattaacacaatcc 4521


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,848,665
Number of Sequences: 3902068
Number of extensions: 2848665
Number of successful extensions: 54165
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54099
Number of HSP's gapped (non-prelim): 66
length of query: 279
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 257
effective length of database: 17,147,199,772
effective search space: 4406830341404
effective search space used: 4406830341404
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)