>gb|AC121571.4| Mus musculus BAC clone RP23-231J6 from 3, complete sequence
          Length = 195006

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 148    gtttcttttattcaaaacatcaga 171
              ||||||||||||||||||||||||
Sbjct: 131186 gtttcttttattcaaaacatcaga 131163

>gb|AY433086.1| Aedes aegypti ASAP ID: 35357 unknown mRNA sequence
          Length = 482

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 25  cttccagcaaatgttcaggtaaaagg 50
           ||||||||||||||||||| ||||||
Sbjct: 156 cttccagcaaatgttcaggaaaaagg 181

>gb|AF346003.1|AF346003 Lolium perenne malate dehydrogenase mRNA, partial cds
          Length = 587

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 152 cttttattcaaaacatcagagc 173
           ||||||||||||||||||||||
Sbjct: 396 cttttattcaaaacatcagagc 375

>gb|AC112682.12| Mus musculus chromosome 6, clone RP23-332K10, complete sequence
          Length = 206903

 Score = 42.1 bits (21), Expect = 0.74
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 167    tcagagcatcaactgctcttc 187
              |||||||||||||||||||||
Sbjct: 126558 tcagagcatcaactgctcttc 126538

>gb|BC053105.1| Mus musculus phosphorylase kinase beta, mRNA (cDNA clone MGC:62514
           IMAGE:6409425), complete cds
          Length = 4640

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 aggtttcttttattcaaaac 165
           ||||||||||||||||||||
Sbjct: 728 aggtttcttttattcaaaac 747

>ref|NM_199446.1| Mus musculus phosphorylase kinase beta (Phkb), mRNA
          Length = 4640

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 aggtttcttttattcaaaac 165
           ||||||||||||||||||||
Sbjct: 728 aggtttcttttattcaaaac 747

>gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, complete sequence
          Length = 257003

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    aggtttcttttattcaaaac 165
              ||||||||||||||||||||
Sbjct: 123832 aggtttcttttattcaaaac 123851

>gb|AC117185.2| Mus musculus BAC clone RP23-37M7 from 8, complete sequence
          Length = 188791

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    aggtttcttttattcaaaac 165
              ||||||||||||||||||||
Sbjct: 164232 aggtttcttttattcaaaac 164251

>emb|AL445195.4| Human DNA sequence from clone RP11-427O13 on chromosome 13 Contains 2
              NADH dehydrogenase pseudogenes and a novel gene, complete
              sequence
          Length = 172064

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 146    aggtttcttttattcaaaacatca 169
              |||||||||||||| |||||||||
Sbjct: 166793 aggtttcttttattaaaaacatca 166816

>gb|AC079243.7| Mus musculus strain C57BL6/J chromosome 6 clone RP23-64M7, complete
             sequence
          Length = 205508

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   gtgcagctgttctgggtgga 126
             ||||||||||||||||||||
Sbjct: 41094 gtgcagctgttctgggtgga 41113

>gb|AC092445.4| Homo sapiens BAC clone RP11-676H8 from 4, complete sequence
          Length = 173840

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 145    aaggtttcttttattcaaaacatc 168
              ||||||||||||||| ||||||||
Sbjct: 120506 aaggtttcttttattgaaaacatc 120483

>dbj|AK165815.1| Mus musculus 13 days embryo brain cDNA, RIKEN full-length enriched
           library, clone:G630093B19 product:phosphorylase kinase
           beta, full insert sequence
          Length = 1015

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 aggtttcttttattcaaaac 165
           ||||||||||||||||||||
Sbjct: 723 aggtttcttttattcaaaac 742

>dbj|AK089493.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730039M10
           product:similar to phosphorylase kinase (EC 2.7.1.38)
           beta chain [Homo sapiens], full insert sequence
          Length = 1972

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 aggtttcttttattcaaaac 165
           ||||||||||||||||||||
Sbjct: 766 aggtttcttttattcaaaac 785

>gb|M74695.1|HIVGP120K Human immunodeficiency virus type 1 env gene, partial cds (a11)
          Length = 396

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 ttattcaaaacatcagagca 174
           ||||||||||||||||||||
Sbjct: 206 ttattcaaaacatcagagca 187


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,122,919
Number of Sequences: 3902068
Number of extensions: 2122919
Number of successful extensions: 39013
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38994
Number of HSP's gapped (non-prelim): 19
length of query: 228
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 206
effective length of database: 17,147,199,772
effective search space: 3532323153032
effective search space used: 3532323153032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)