>gb|AC103592.2| Homo sapiens chromosome 1 clone RP11-335E14, complete sequence
          Length = 197372

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 164    ttttgaatgtacaagatgtttt 185
              ||||||||||||||||||||||
Sbjct: 143321 ttttgaatgtacaagatgtttt 143342

>gb|AC099769.2| Homo sapiens chromosome 1 clone RP5-963M5, complete sequence
          Length = 99680

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 164   ttttgaatgtacaagatgtttt 185
             ||||||||||||||||||||||
Sbjct: 94579 ttttgaatgtacaagatgtttt 94558

>gb|AC119567.11| Homo sapiens X BAC RP11-416J16 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 79556

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 129  aaaataacacacttattatct 149
            |||||||||||||||||||||
Sbjct: 2403 aaaataacacacttattatct 2423

>emb|BX664713.6| Zebrafish DNA sequence from clone DKEY-27N8 in linkage group 8,
             complete sequence
          Length = 126218

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 41    caaaactgctttattacactc 61
             |||||||||||||||||||||
Sbjct: 10074 caaaactgctttattacactc 10054

>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 95      atcgagctagttgcacgtac 114
               ||||||||||||||||||||
Sbjct: 1149975 atcgagctagttgcacgtac 1149994

>gb|AC146600.4| Mus musculus BAC clone RP23-386G7 from chromosome 17, complete sequence
          Length = 198403

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 183    tttggcagtttcaaattaaactgtcaaa 210
              ||||| ||||||||| ||||||||||||
Sbjct: 122863 tttggtagtttcaaaataaactgtcaaa 122890

>gb|AC122377.4| Mus musculus BAC clone RP23-473B13 from chromosome 17, complete sequence
          Length = 174143

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 183    tttggcagtttcaaattaaactgtcaaa 210
              ||||| ||||||||| ||||||||||||
Sbjct: 118465 tttggtagtttcaaaataaactgtcaaa 118438

>emb|AL031687.17|HS998H6 Human DNA sequence from clone RP5-998H6 on chromosome 20q13.1 Contains
             the CDH22 gene for cadherin-like 22, a novel gene and two
             CpG islands, complete sequence
          Length = 147815

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 42    aaaactgctttattacactcacat 65
             |||||||||||||| |||||||||
Sbjct: 26458 aaaactgctttattccactcacat 26435

>gb|AC078857.12| Homo sapiens 3 BAC RP11-678L1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 190060

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   tactgcctctgtttttgaat 171
             ||||||||||||||||||||
Sbjct: 70406 tactgcctctgtttttgaat 70425

>gb|AC159471.6| Mus musculus 6 BAC RP24-148O24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 159386

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   tgttttggcagtttcaaatt 199
             ||||||||||||||||||||
Sbjct: 99184 tgttttggcagtttcaaatt 99203

>gb|AC096547.1| Homo sapiens BAC clone CTD-2016K1 from 2, complete sequence
          Length = 129164

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   ctgtttttgaatgtacaaga 179
             ||||||||||||||||||||
Sbjct: 20615 ctgtttttgaatgtacaaga 20596

>emb|AL670236.9| Mouse DNA sequence from clone RP23-242K15 on chromosome 4, complete
             sequence
          Length = 232950

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    gactgatgtccagcaaaact 47
             ||||||||||||||||||||
Sbjct: 38214 gactgatgtccagcaaaact 38233


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,122,207
Number of Sequences: 3902068
Number of extensions: 2122207
Number of successful extensions: 148395
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 148361
Number of HSP's gapped (non-prelim): 34
length of query: 214
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 192
effective length of database: 17,147,199,772
effective search space: 3292262356224
effective search space used: 3292262356224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)