ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet53a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CBP1_ORYSA (P37890) Serine carboxypeptidase 1 precursor (EC 3.4.... 38 0.008
2CBP1_HORVU (P07519) Serine carboxypeptidase 1 precursor (EC 3.4.... 37 0.017
3OR8S1_HUMAN (Q8NH09) Olfactory receptor 8S1 30 1.6
4CBP23_HORVU (P52711) Serine carboxypeptidase II-3 precursor (EC ... 29 2.7
5CBPY_CANAL (P30574) Carboxypeptidase Y precursor (EC 3.4.16.5) (... 29 3.5
6CBPY_PICPA (P52710) Carboxypeptidase Y precursor (EC 3.4.16.5) (... 28 7.8
7FA40A_BRARE (Q803T2) Protein FAM40A 28 7.8

>CBP1_ORYSA (P37890) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine|
           carboxypeptidase I) (Carboxypeptidase C)
          Length = 510

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -3

Query: 287 GHTAPEYMPRECLAMIDRWLSGEPL 213
           GHT PEY P+E LA   RWL+G  L
Sbjct: 486 GHTVPEYKPQESLAFYSRWLAGSKL 510



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>CBP1_HORVU (P07519) Serine carboxypeptidase 1 precursor (EC 3.4.16.5) (Serine|
           carboxypeptidase I) (Carboxypeptidase C) (CP-MI)
           [Contains: Serine carboxypeptidase 1 chain A (Serine
           carboxypeptidase I chain A); Serine carboxypeptidase 1
           chain B (Serine car
          Length = 499

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -3

Query: 287 GHTAPEYMPRECLAMIDRWLSGEPL 213
           GHT PEY P+E  A   RWL+G  L
Sbjct: 475 GHTVPEYKPQEAFAFYSRWLAGSKL 499



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>OR8S1_HUMAN (Q8NH09) Olfactory receptor 8S1|
          Length = 359

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 246 YDRQMAFRRAALSDQLMSRRLLMHVV 169
           YDR  A RR  L  Q+M ++L MH+V
Sbjct: 120 YDRHAAIRRPLLYGQIMGKQLYMHLV 145



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>CBP23_HORVU (P52711) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6)|
           (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain
           A; Serine carboxypeptidase II-3 chain B]
          Length = 516

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 287 GHTAPEYMPRECLAMIDRWLSGEPL 213
           GH  P Y PR  L ++  +L+G+ L
Sbjct: 483 GHEVPSYQPRRALVLVQNFLAGKAL 507



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>CBPY_CANAL (P30574) Carboxypeptidase Y precursor (EC 3.4.16.5)|
           (Carboxypeptidase YSCY)
          Length = 542

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 287 GHTAPEYMPRECLAMIDRWLSGE 219
           GH  P   P   L M++RW+SG+
Sbjct: 517 GHMVPYDQPENALDMVNRWISGD 539



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>CBPY_PICPA (P52710) Carboxypeptidase Y precursor (EC 3.4.16.5)|
           (Carboxypeptidase YSCY)
          Length = 523

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 287 GHTAPEYMPRECLAMIDRWLSGE 219
           GH AP   P     M++RW+SG+
Sbjct: 497 GHMAPYDQPENSHEMVNRWISGD 519



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>FA40A_BRARE (Q803T2) Protein FAM40A|
          Length = 813

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +2

Query: 89  CRSKVSIQHTLHDNIFHLIYIFSYLLLTTCINNLRDIS*SLRAARRK 229
           C S++ +QH +  N+F L+ + ++  L   +N   D S +  +A RK
Sbjct: 134 CSSELEVQHWMRYNVFLLLDVGAFTALVELLNMEIDNSAACSSAVRK 180


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,890,780
Number of Sequences: 219361
Number of extensions: 629065
Number of successful extensions: 1202
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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