ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet53a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474646.1| Oryza sativa (japonica cultivar-group), predic... 70 4e-09
2emb|AL606993.2|OSJN00121 Oryza sativa genomic DNA, chromosome 4,... 70 4e-09
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 70 4e-09
4gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, co... 46 0.061
5gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, co... 46 0.061
6gb|AC149636.14| Medicago truncatula clone mth2-180a12, complete ... 44 0.24
7emb|CT009511.9| M.truncatula DNA sequence from clone MTH2-69I7 o... 44 0.24
8gb|CP000175.1| Drosophila melanogaster genomic scaffold 21100002... 44 0.24
9ref|NM_194479.1| Oryza sativa (japonica cultivar-group) putative... 42 0.96
10gb|AC079632.4| Oryza sativa (japonica cultivar-group) chromosome... 42 0.96
11gb|AC104317.2| Homo sapiens chromosome 8 clone RP11-383J24 map q... 42 0.96
12gb|AC110716.6| Homo sapiens 3 BAC RP11-442N1 (Roswell Park Cance... 42 0.96
13gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.96
14emb|BX571852.20| Zebrafish DNA sequence from clone DKEY-175N6 in... 42 0.96
15gb|AC166065.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.96
16gb|AC016933.20| Homo sapiens 3 BAC RP11-166D18 (Roswell Park Can... 42 0.96
17gb|AC108883.1| Genomic sequence for (japonica cultivar-group) cu... 42 0.96
18gb|AC063938.13| Homo sapiens 3 BAC RP11-495I11 (Roswell Park Can... 42 0.96
19dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.96
20gb|AC007218.6| Homo sapiens chromosome 16 clone RP11-297M9, comp... 42 0.96
21gb|AC010740.7| Homo sapiens BAC clone RP11-493I5 from 2, complet... 42 0.96
22gb|AC107426.13| Homo sapiens 3 BAC RP11-573F3 (Roswell Park Canc... 42 0.96
23gb|AC114290.2| Homo sapiens chromosome 5 clone CTD-3062C19, comp... 42 0.96
24gb|AC090192.19| Homo sapiens chromosome 8, clone RP11-383J24, co... 42 0.96
25emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 ... 42 0.96
26emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 i... 42 0.96
27gb|AC006531.1|AC006531 Homo sapiens chromosome 16 clone 113K5, c... 42 0.96
28dbj|AK104807.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.96
29dbj|AK072954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.96
30gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.96
31gb|AC137708.16| Mus musculus chromosome 3, clone RP24-277H8, com... 42 0.96
32emb|AL671925.4| Mouse DNA sequence from clone RP23-236O21 on chr... 42 0.96
33gb|AC171263.1| Pan troglodytes chromosome X clone PTB-018K13 map... 40 3.8
34gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.8
35gb|AC104281.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.8
36gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6... 40 3.8
37gb|AC145508.3| Dasypus novemcinctus clone VMRC5-464O17, complete... 40 3.8
38gb|AF172282.1| Oryza sativa adh1-adh2 region 40 3.8
39gb|AC146536.3| Dasypus novemcinctus clone VMRC5-215B23, complete... 40 3.8
40gb|AY021803.1| Oryza sativa microsatellite MRG4128 containing (T... 40 3.8
41gb|AC149429.1| Populus trichocarpa clone Pop1-109D09, complete s... 40 3.8
42gb|AC123523.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.8
43gb|AC138714.4| Mus musculus chromosome 18 clone RP23-406C12, com... 40 3.8
44emb|AL627402.10| Human DNA sequence from clone RP11-204C16 on ch... 40 3.8
45gb|AE014837.1| Plasmodium falciparum 3D7 chromosome 11 section 2... 40 3.8
46emb|AL162386.17| Human DNA sequence from clone RP11-272P10 on ch... 40 3.8
47gb|AC131213.4| Homo sapiens 12 BAC RP13-544K12 (Roswell Park Can... 40 3.8
48emb|AL008970.3|PFMAL3P4 Plasmodium falciparum MAL3P4 40 3.8
49gb|AC162036.4| Mus musculus chromosome 3, clone RP24-324K2, comp... 40 3.8
50emb|BX571942.11| Zebrafish DNA sequence from clone DKEY-240A24 i... 40 3.8
51emb|BX293996.16| Zebrafish DNA sequence from clone DKEY-38J20 in... 40 3.8
52gb|AC026347.17| Homo sapiens 3 BAC RP11-362A9 (Roswell Park Canc... 40 3.8
53gb|AC092034.2| Homo sapiens chromosome 3 clone RP11-48N23, compl... 40 3.8
54gb|AC009166.4| Homo sapiens chromosome 16 clone RP11-80B1, compl... 40 3.8
55gb|AC103566.1| Caenorhabditis briggsae cosmid CB024E07, complete... 40 3.8
56gb|AC093060.2| Homo sapiens chromosome 19 clone LLNLF-210G10, co... 40 3.8
57gb|AC153145.4| Mus musculus BAC clone RP23-222C3 from chromosome... 40 3.8
58gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, re... 40 3.8
59dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
60dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
61gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, re... 40 3.8
62gb|AY967997.1| Pegoscapus tonduzi cytochrome oxidase subunit I (... 40 3.8
63gb|AC073485.3| Homo sapiens BAC clone RP11-798J16 from 2, comple... 40 3.8
64gb|AC137494.1| Homo sapiens chromosome 16 clone LA16c-491E3, com... 40 3.8
65gb|AC135388.2| Homo sapiens 12 BAC RP11-474D1 (Roswell Park Canc... 40 3.8
66emb|BX537165.3| Zebrafish DNA sequence from clone CH211-263O4 in... 40 3.8
67emb|X15855.1|LELAT52 Tomato anther specific LAT52 gene 40 3.8
68emb|AL583785.2|HS536O18 Homo sapiens chromosome 9 BAC RP11-536O1... 40 3.8
69gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 ... 40 3.8
70emb|AL837509.11| Mouse DNA sequence from clone RP23-44L6 on chro... 40 3.8
71gb|AC005785.1|AC005785 Homo sapiens chromosome 19, cosmid R33907... 40 3.8
72gb|AC102272.20| Mus musculus chromosome 3, clone RP24-283P8, com... 40 3.8
73ref|NM_005858.2| Homo sapiens A kinase (PRKA) anchor protein 8 (... 40 3.8
74gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.8
75gb|AC147989.4| Mus musculus BAC clone RP24-468I14 from 18, compl... 40 3.8
76emb|AL845280.4| Mouse DNA sequence from clone RP23-265L1 on chro... 40 3.8
77gb|AC146366.3| Dasypus novemcinctus clone VMRC5-468M8, complete ... 40 3.8
78emb|AL050160.1|HSM800458 Homo sapiens mRNA; cDNA DKFZp586B1222 (... 40 3.8 
>ref|XM_474646.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1404

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 226  gaaagccatctgtcgatcatagcaaggcactccctgggcatgtactccggggctgtgtg 284
            ||||||||||| || | ||||||||| |||||| | |||||||||||||||||||||||
Sbjct: 1388 gaaagccatctatcaaccatagcaagacactcctttggcatgtactccggggctgtgtg 1330
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>emb|AL606993.2|OSJN00121 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0051N19,
            complete sequence
          Length = 49800

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                       
Query: 226  gaaagccatctgtcgatcatagcaaggcactccctgggcatgtactccggggctgtgtg 284
            ||||||||||| || | ||||||||| |||||| | |||||||||||||||||||||||
Sbjct: 9139 gaaagccatctatcaaccatagcaagacactcctttggcatgtactccggggctgtgtg 9197
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                          
Query: 226     gaaagccatctgtcgatcatagcaaggcactccctgggcatgtactccggggctgtgtg 284
               ||||||||||| || | ||||||||| |||||| | |||||||||||||||||||||||
Sbjct: 5174734 gaaagccatctatcaaccatagcaagacactcctttggcatgtactccggggctgtgtg 5174792
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>gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, complete sequence
          Length = 147518

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 142  tatatatatattctcttatctat 164
            |||||||||||||||||||||||
Sbjct: 5629 tatatatatattctcttatctat 5607
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>gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, complete sequence
          Length = 219617

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 142    tatatatatattctcttatctat 164
              |||||||||||||||||||||||
Sbjct: 139842 tatatatatattctcttatctat 139820
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>gb|AC149636.14| Medicago truncatula clone mth2-180a12, complete sequence
          Length = 139348

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 137  catcttatatatatattctctt 158
            ||||||||||||||||||||||
Sbjct: 7502 catcttatatatatattctctt 7481
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>emb|CT009511.9| M.truncatula DNA sequence from clone MTH2-69I7 on chromosome 3,
             complete sequence
          Length = 116999

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 134   tttcatcttatatatatattct 155
             ||||||||||||||||||||||
Sbjct: 30337 tttcatcttatatatatattct 30316
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>gb|CP000175.1| Drosophila melanogaster genomic scaffold 211000022279519
          Length = 115332

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 62    taatctcaatggaagtgaccac 83
             ||||||||||||||||||||||
Sbjct: 52393 taatctcaatggaagtgaccac 52372
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>ref|NM_194479.1| Oryza sativa (japonica cultivar-group) putative acyltransferase
            (OSJNBa0046L02.9), mRNA
          Length = 1185

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 231  ccatctgtcgatcatagcaaggcactccctgggcatgtactccggggctgtgtggcc 287
            ||||||||||| |||  | ||||||||| ||||   |||||||||||| ||||||||
Sbjct: 1161 ccatctgtcgagcatgtcgaggcactccttggggcggtactccggggcggtgtggcc 1105
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>gb|AC079632.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0046L02, complete sequence
          Length = 142381

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                      
Query: 231   ccatctgtcgatcatagcaaggcactccctgggcatgtactccggggctgtgtggcc 287
             ||||||||||| |||  | ||||||||| ||||   |||||||||||| ||||||||
Sbjct: 75315 ccatctgtcgagcatgtcgaggcactccttggggcggtactccggggcggtgtggcc 75371
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>gb|AC104317.2| Homo sapiens chromosome 8 clone RP11-383J24 map q24.13, complete
             sequence
          Length = 198700

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 129   atatatttcatcttatatatatatt 153
             |||||||| ||||||||||||||||
Sbjct: 35425 atatattttatcttatatatatatt 35449
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>gb|AC110716.6| Homo sapiens 3 BAC RP11-442N1 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 67856

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 128 aatatatttcatcttatatatatat 152
           |||||||||||||||| ||||||||
Sbjct: 288 aatatatttcatcttaaatatatat 312
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                      
Query: 231   ccatctgtcgatcatagcaaggcactccctgggcatgtactccggggctgtgtggcc 287
             ||||||||||| |||  | ||||||||| ||||   |||||||||||| ||||||||
Sbjct: 89421 ccatctgtcgagcatgtcgaggcactccttggggcggtactccggggcggtgtggcc 89477
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>emb|BX571852.20| Zebrafish DNA sequence from clone DKEY-175N6 in linkage group 10,
             complete sequence
          Length = 178333

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 128   aatatatttcatcttatatatatat 152
             |||||||||||| ||||||||||||
Sbjct: 96917 aatatatttcatattatatatatat 96941



 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 128   aatatatttcatcttatatatatat 152
             |||||||||||| ||||||||||||
Sbjct: 96672 aatatatttcatattatatatatat 96648
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>gb|AC166065.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1136E01,
             complete sequence
          Length = 105139

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                      
Query: 231   ccatctgtcgatcatagcaaggcactccctgggcatgtactccggggctgtgtggcc 287
             ||||||||||| |||  | ||||||||| ||||   |||||||||||| ||||||||
Sbjct: 94560 ccatctgtcgagcatgtcgaggcactccttggggcggtactccggggcggtgtggcc 94616
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>gb|AC016933.20| Homo sapiens 3 BAC RP11-166D18 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 153763

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 128  aatatatttcatcttatatatatat 152
            |||||||||||||||| ||||||||
Sbjct: 1717 aatatatttcatcttaaatatatat 1693
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>gb|AC108883.1| Genomic sequence for (japonica cultivar-group) cultivar Nipponbare
             clone OJ1136E01, from chromosome 10, complete sequence
          Length = 113856

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                      
Query: 231   ccatctgtcgatcatagcaaggcactccctgggcatgtactccggggctgtgtggcc 287
             ||||||||||| |||  | ||||||||| ||||   |||||||||||| ||||||||
Sbjct: 24436 ccatctgtcgagcatgtcgaggcactccttggggcggtactccggggcggtgtggcc 24380
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>gb|AC063938.13| Homo sapiens 3 BAC RP11-495I11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 94244

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 132   tatttcatcttatatatatat 152
             |||||||||||||||||||||
Sbjct: 92174 tatttcatcttatatatatat 92154
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
             complete sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                      
Query: 231   ccatctgtcgatcatagcaaggcactccctgggcatgtactccggggctgtgtggcc 287
             ||||||||||| |||  | ||||||||| ||||   |||||||||||| ||||||||
Sbjct: 89421 ccatctgtcgagcatgtcgaggcactccttggggcggtactccggggcggtgtggcc 89477
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>gb|AC007218.6| Homo sapiens chromosome 16 clone RP11-297M9, complete sequence
          Length = 193220

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 137    catcttatatatatattctct 157
              |||||||||||||||||||||
Sbjct: 153951 catcttatatatatattctct 153971
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>gb|AC010740.7| Homo sapiens BAC clone RP11-493I5 from 2, complete sequence
          Length = 184455

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 128   aatatatttcatcttatatatatat 152
             |||||||||||| ||||||||||||
Sbjct: 18241 aatatatttcattttatatatatat 18217
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>gb|AC107426.13| Homo sapiens 3 BAC RP11-573F3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114540

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 129   atatatttcatcttatatatatatt 153
             ||||||||||| |||||||||||||
Sbjct: 94153 atatatttcattttatatatatatt 94177
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>gb|AC114290.2| Homo sapiens chromosome 5 clone CTD-3062C19, complete sequence
          Length = 76144

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 128   aatatatttcatcttatatatatat 152
             |||||||||||| ||||||||||||
Sbjct: 60919 aatatatttcattttatatatatat 60943
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>gb|AC090192.19| Homo sapiens chromosome 8, clone RP11-383J24, complete sequence
          Length = 198899

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 129   atatatttcatcttatatatatatt 153
             |||||||| ||||||||||||||||
Sbjct: 35426 atatattttatcttatatatatatt 35450
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>emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 in linkage group 20,
             complete sequence
          Length = 151552

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 136   tcatcttatatatatattctcttat 160
             |||||||||||||||||| ||||||
Sbjct: 34960 tcatcttatatatatattatcttat 34936
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>emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 in linkage group 17,
             complete sequence
          Length = 187548

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 132   tatttcatcttatatatatat 152
             |||||||||||||||||||||
Sbjct: 64524 tatttcatcttatatatatat 64504
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>gb|AC006531.1|AC006531 Homo sapiens chromosome 16 clone 113K5, complete sequence
          Length = 167525

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 137   catcttatatatatattctct 157
             |||||||||||||||||||||
Sbjct: 32916 catcttatatatatattctct 32936
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>dbj|AK104807.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-E08, full
            insert sequence
          Length = 1605

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 231  ccatctgtcgatcatagcaaggcactccctgggcatgtactccggggctgtgtggcc 287
            ||||||||||| |||  | ||||||||| ||||   |||||||||||| ||||||||
Sbjct: 1400 ccatctgtcgagcatgtcgaggcactccttggggcggtactccggggcggtgtggcc 1344
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>dbj|AK072954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149K09, full
            insert sequence
          Length = 1655

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 231  ccatctgtcgatcatagcaaggcactccctgggcatgtactccggggctgtgtggcc 287
            ||||||||||| |||  | ||||||||| ||||   |||||||||||| ||||||||
Sbjct: 1403 ccatctgtcgagcatgtcgaggcactccttggggcggtactccggggcggtgtggcc 1347
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                      
Query: 231   ccatctgtcgatcatagcaaggcactccctgggcatgtactccggggctgtgtggcc 287
             ||||||||||| |||  | ||||||||| ||||   |||||||||||| ||||||||
Sbjct: 89419 ccatctgtcgagcatgtcgaggcactccttggggcggtactccggggcggtgtggcc 89475
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>gb|AC137708.16| Mus musculus chromosome 3, clone RP24-277H8, complete sequence
          Length = 154779

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 128    aatatatttcatcttatatat 148
              |||||||||||||||||||||
Sbjct: 109330 aatatatttcatcttatatat 109310
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>emb|AL671925.4| Mouse DNA sequence from clone RP23-236O21 on chromosome 4, complete
             sequence
          Length = 218429

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 132   tatttcatcttatatatatat 152
             |||||||||||||||||||||
Sbjct: 41143 tatttcatcttatatatatat 41163
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>gb|AC171263.1| Pan troglodytes chromosome X clone PTB-018K13 map human ortholog p11.4,
             complete sequence
          Length = 147595

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    ataaattaatctcaatggaa 75
             ||||||||||||||||||||
Sbjct: 52103 ataaattaatctcaatggaa 52122
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>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0036C12, complete sequence
          Length = 145517

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 130  tatatttcatcttatatata 149
            ||||||||||||||||||||
Sbjct: 1377 tatatttcatcttatatata 1396
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>gb|AC104281.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1537_B05,
             complete sequence
          Length = 129890

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   tatatttcatcttatatata 149
             ||||||||||||||||||||
Sbjct: 86883 tatatttcatcttatatata 86902
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>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete
             sequence
          Length = 252420

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 129   atatatttcatcttatatatatat 152
             |||||||| |||||||||||||||
Sbjct: 65242 atatattttatcttatatatatat 65219
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>gb|AC145508.3| Dasypus novemcinctus clone VMRC5-464O17, complete sequence
          Length = 169201

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 47     ttgggattcataaattaatctcaa 70
              |||||||||||||| |||||||||
Sbjct: 127452 ttgggattcataaaataatctcaa 127475



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 47     ttgggattcataaattaatctcaa 70
              |||||||||||||| |||||||||
Sbjct: 122099 ttgggattcataaaataatctcaa 122076
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>gb|AF172282.1| Oryza sativa adh1-adh2 region
          Length = 339485

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    atttcatcttatatatatat 152
              ||||||||||||||||||||
Sbjct: 274428 atttcatcttatatatatat 274409
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>gb|AC146536.3| Dasypus novemcinctus clone VMRC5-215B23, complete sequence
          Length = 113776

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 47    ttgggattcataaattaatctcaa 70
             |||||||||||||| |||||||||
Sbjct: 99458 ttgggattcataaaataatctcaa 99435
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>gb|AY021803.1| Oryza sativa microsatellite MRG4128 containing (TA)X36, closest to
           marker C477, genomic sequence
          Length = 272

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 133 atttcatcttatatatatat 152
           ||||||||||||||||||||
Sbjct: 181 atttcatcttatatatatat 162
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>gb|AC149429.1| Populus trichocarpa clone Pop1-109D09, complete sequence
          Length = 94633

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   tatatatatattctcttatc 161
             ||||||||||||||||||||
Sbjct: 55577 tatatatatattctcttatc 55558
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>gb|AC123523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0051P13, complete sequence
          Length = 142241

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   atttcatcttatatatatat 152
             ||||||||||||||||||||
Sbjct: 61668 atttcatcttatatatatat 61687
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>gb|AC138714.4| Mus musculus chromosome 18 clone RP23-406C12, complete sequence
          Length = 191928

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   tatatatatattctcttatc 161
             ||||||||||||||||||||
Sbjct: 41933 tatatatatattctcttatc 41914
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>emb|AL627402.10| Human DNA sequence from clone RP11-204C16 on chromosome X Contains part
             of the CASK gene for calcium/calmodulin-dependent serine
             protein kinase (MAGUK family), the GPR34 gene for G
             protein-coupled receptor 34, the GPR82 gene for G
             protein-coupled receptor 82, a tyrosine
             3-monooxygenase/tryptophan 5-monooxygenase activation
             protein, zeta polypeptide (YWHAZ) pseudogene and a CpG
             island, complete sequence
          Length = 132290

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    ataaattaatctcaatggaa 75
             ||||||||||||||||||||
Sbjct: 60449 ataaattaatctcaatggaa 60468
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>gb|AE014837.1| Plasmodium falciparum 3D7 chromosome 11 section 2 of 8 of the complete
              sequence
          Length = 257757

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    tatatatatattctcttatc 161
              ||||||||||||||||||||
Sbjct: 202379 tatatatatattctcttatc 202398
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>emb|AL162386.17| Human DNA sequence from clone RP11-272P10 on chromosome 9 Contains the 5'
              end of the MPDZ gene for multiple PDZ domain protein, a
              novel gene, an  inhibitor of growth family member 1 (ING1)
              pseudogene and a CpG island, complete sequence
          Length = 164138

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 129    atatatttcatcttatatatatat 152
              ||||||||||||||| ||||||||
Sbjct: 143437 atatatttcatcttaaatatatat 143414
to top
>gb|AC131213.4| Homo sapiens 12 BAC RP13-544K12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 153999

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 129    atatatttcatcttatatatatat 152
              ||||||||||| ||||||||||||
Sbjct: 127959 atatatttcattttatatatatat 127982
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>emb|AL008970.3|PFMAL3P4 Plasmodium falciparum MAL3P4
          Length = 113880

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   tatatttcatcttatatata 149
             ||||||||||||||||||||
Sbjct: 76542 tatatttcatcttatatata 76561
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>gb|AC162036.4| Mus musculus chromosome 3, clone RP24-324K2, complete sequence
          Length = 161596

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 131   atatttcatcttatatatatattctctt 158
             ||||||||| ||||||||||||| ||||
Sbjct: 41159 atatttcatattatatatatattatctt 41132
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>emb|BX571942.11| Zebrafish DNA sequence from clone DKEY-240A24 in linkage group 11,
             complete sequence
          Length = 102110

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 129   atatatttcatcttatatatatat 152
             |||||||||||| |||||||||||
Sbjct: 84500 atatatttcatcatatatatatat 84523
to top
>emb|BX293996.16| Zebrafish DNA sequence from clone DKEY-38J20 in linkage group 1,
             complete sequence
          Length = 237723

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   tttcatcttatatatatatt 153
             ||||||||||||||||||||
Sbjct: 22716 tttcatcttatatatatatt 22697
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>gb|AC026347.17| Homo sapiens 3 BAC RP11-362A9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 195430

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 129   atatatttcatcttatatatatat 152
             |||||||| |||||||||||||||
Sbjct: 27874 atatattttatcttatatatatat 27897
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>gb|AC092034.2| Homo sapiens chromosome 3 clone RP11-48N23, complete sequence
          Length = 154084

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    aaattaatctcaatggaagt 77
             ||||||||||||||||||||
Sbjct: 32998 aaattaatctcaatggaagt 32979
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>gb|AC009166.4| Homo sapiens chromosome 16 clone RP11-80B1, complete sequence
          Length = 174550

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 142  tatatatatattctcttatctatt 165
            ||||||||||||||||||| ||||
Sbjct: 3327 tatatatatattctcttatatatt 3304
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>gb|AC103566.1| Caenorhabditis briggsae cosmid CB024E07, complete sequence
          Length = 79224

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 129   atatatttcatcttatatatatat 152
             |||||||||||| |||||||||||
Sbjct: 29382 atatatttcatcctatatatatat 29359
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>gb|AC093060.2| Homo sapiens chromosome 19 clone LLNLF-210G10, complete sequence
          Length = 4777

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 129  atatatttcatcttatatatatat 152
            ||||||||||| ||||||||||||
Sbjct: 4385 atatatttcattttatatatatat 4408
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>gb|AC153145.4| Mus musculus BAC clone RP23-222C3 from chromosome 18, complete sequence
          Length = 193382

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   tatatatatattctcttatc 161
             ||||||||||||||||||||
Sbjct: 41932 tatatatatattctcttatc 41913
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>gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, region 18E-18F, BAC clone
              BACR33M08, complete sequence
          Length = 180263

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 130    tatatttcatcttatatatatatt 153
              ||||||| ||||||||||||||||
Sbjct: 162665 tatattttatcttatatatatatt 162642
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 133     atttcatcttatatatatat 152
               ||||||||||||||||||||
Sbjct: 5401127 atttcatcttatatatatat 5401146
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 130      tatatttcatcttatatata 149
                ||||||||||||||||||||
Sbjct: 16677267 tatatttcatcttatatata 16677286
to top
>gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, region 18F-18F, BAC clone
             BACR48P17, complete sequence
          Length = 176195

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   tatatttcatcttatatatatatt 153
             ||||||| ||||||||||||||||
Sbjct: 46025 tatattttatcttatatatatatt 46002
to top
>gb|AY967997.1| Pegoscapus tonduzi cytochrome oxidase subunit I (COI) gene, partial
           cds; mitochondrial
          Length = 816

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 tatatttcatcttatatata 149
           ||||||||||||||||||||
Sbjct: 633 tatatttcatcttatatata 614
to top
>gb|AC073485.3| Homo sapiens BAC clone RP11-798J16 from 2, complete sequence
          Length = 140811

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   atatatttcatcttatatat 148
             ||||||||||||||||||||
Sbjct: 77197 atatatttcatcttatatat 77178
to top
>gb|AC137494.1| Homo sapiens chromosome 16 clone LA16c-491E3, complete sequence
          Length = 37190

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 142   tatatatatattctcttatctatt 165
             ||||||||||||||||||| ||||
Sbjct: 28258 tatatatatattctcttatatatt 28281
to top
>gb|AC135388.2| Homo sapiens 12 BAC RP11-474D1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 85801

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    ttatttgtttatgtccattg 49
             ||||||||||||||||||||
Sbjct: 75037 ttatttgtttatgtccattg 75056
to top
>emb|BX537165.3| Zebrafish DNA sequence from clone CH211-263O4 in linkage group 1,
              complete sequence
          Length = 158346

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    tttcatcttatatatatatt 153
              ||||||||||||||||||||
Sbjct: 144255 tttcatcttatatatatatt 144274
to top
>emb|X15855.1|LELAT52 Tomato anther specific LAT52 gene
          Length = 1810

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  atttcatcttatatatatat 152
            ||||||||||||||||||||
Sbjct: 1183 atttcatcttatatatatat 1202
to top
>emb|AL583785.2|HS536O18 Homo sapiens chromosome 9 BAC RP11-536O18, complete sequence
          Length = 174798

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 129   atatatttcatcttatatatatat 152
             ||||||||||||||| ||||||||
Sbjct: 40560 atatatttcatcttaaatatatat 40537
to top
>gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 of 74 of the complete
             sequence
          Length = 207432

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   tatatttcatcttatatatatatt 153
             ||||||| ||||||||||||||||
Sbjct: 66164 tatattttatcttatatatatatt 66141
to top
>emb|AL837509.11| Mouse DNA sequence from clone RP23-44L6 on chromosome 2, complete
              sequence
          Length = 156698

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    tttcatcttatatatatatt 153
              ||||||||||||||||||||
Sbjct: 109007 tttcatcttatatatatatt 109026
to top
>gb|AC005785.1|AC005785 Homo sapiens chromosome 19, cosmid R33907, complete sequence
          Length = 41630

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 129  atatatttcatcttatatatatat 152
            ||||||||||| ||||||||||||
Sbjct: 1846 atatatttcattttatatatatat 1869
to top
>gb|AC102272.20| Mus musculus chromosome 3, clone RP24-283P8, complete sequence
          Length = 161178

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 131   atatttcatcttatatatatattctctt 158
             ||||||||| ||||||||||||| ||||
Sbjct: 87933 atatttcatattatatatatattatctt 87960
to top
>ref|NM_005858.2| Homo sapiens A kinase (PRKA) anchor protein 8 (AKAP8), mRNA
          Length = 3545

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 129  atatatttcatcttatatatatat 152
            ||||||||||| ||||||||||||
Sbjct: 3137 atatatttcattttatatatatat 3114
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 133     atttcatcttatatatatat 152
               ||||||||||||||||||||
Sbjct: 5467604 atttcatcttatatatatat 5467623
to top
>gb|AC147989.4| Mus musculus BAC clone RP24-468I14 from 18, complete sequence
          Length = 204168

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   tatatatatattctcttatc 161
             ||||||||||||||||||||
Sbjct: 48912 tatatatatattctcttatc 48931
to top
>emb|AL845280.4| Mouse DNA sequence from clone RP23-265L1 on chromosome X, complete
              sequence
          Length = 142846

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    atttcatcttatatatatat 152
              ||||||||||||||||||||
Sbjct: 102995 atttcatcttatatatatat 102976
to top
>gb|AC146366.3| Dasypus novemcinctus clone VMRC5-468M8, complete sequence
          Length = 112552

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 47   ttgggattcataaattaatctcaa 70
            |||||||||||||| |||||||||
Sbjct: 4316 ttgggattcataaaataatctcaa 4293
to top
>emb|AL050160.1|HSM800458 Homo sapiens mRNA; cDNA DKFZp586B1222 (from clone DKFZp586B1222);
            partial cds
          Length = 2482

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 129  atatatttcatcttatatatatat 152
            ||||||||||| ||||||||||||
Sbjct: 2074 atatatttcattttatatatatat 2051


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,904,389
Number of Sequences: 3902068
Number of extensions: 11904389
Number of successful extensions: 74534
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74195
Number of HSP's gapped (non-prelim): 339
length of query: 289
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 267
effective length of database: 17,147,199,772
effective search space: 4578302339124
effective search space used: 4578302339124
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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