| Clone Name | rbaet53a03 |
|---|---|
| Clone Library Name | barley_pub |
>DCN1_MAGGR (Q52DM9) Defective in cullin neddylation protein 1| Length = 281 Score = 30.8 bits (68), Expect = 0.90 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Frame = -3 Query: 287 YGEYNWGQTMEKKVRHEVMAIATRSTVDVPFTYWQRD----VTIDGKVE 153 Y + NW +T+ K + ++ + A +ST D ++W + IDG VE Sbjct: 216 YLKNNWSRTVSKDMWNQTLDFAVKSTADSTLSFWTPEGSWPSVIDGFVE 264
>HLDD_NEIMB (Q9K002) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 334 Score = 29.3 bits (64), Expect = 2.6 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -3 Query: 164 GKVEETLMRDGLYTGINSYNFNFDTVEEKLPERIP 60 G +T+ DGLY N+Y + D ++ ERIP Sbjct: 78 GACSDTMNHDGLYMMDNNYQYTLDLLDWCQDERIP 112
>HLDD_NEIGO (Q51061) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 334 Score = 29.3 bits (64), Expect = 2.6 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -3 Query: 164 GKVEETLMRDGLYTGINSYNFNFDTVEEKLPERIP 60 G +T+ DGLY N+Y + D ++ ERIP Sbjct: 78 GACSDTMNHDGLYMMENNYQYTLDLLDWCQDERIP 112
>KDUI_OCEIH (Q8EMM9) 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC| 5.3.1.17) (5-keto-4-deoxyuronate isomerase) (DKI isomerase) Length = 277 Score = 28.9 bits (63), Expect = 3.4 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 176 VTIDGKVEETLMRDGLYTGINSYNFNFDTVEEKLPER 66 +T+DG+V E RD LY G + N ++++ P R Sbjct: 88 ITVDGEVYELDHRDCLYVGKENKNILIESIDSDNPAR 124
>HLDD_NEIMA (Q9JQX8) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 334 Score = 28.5 bits (62), Expect = 4.5 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -3 Query: 164 GKVEETLMRDGLYTGINSYNFNFDTVEEKLPERIP 60 G +T+ DGLY N+Y + D ++ ERIP Sbjct: 78 GACSDTMNYDGLYMMDNNYQYTLDLLDWCQDERIP 112
>DFRA_PETHY (P14720) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 380 Score = 28.5 bits (62), Expect = 4.5 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Frame = -3 Query: 257 EKKVRHEVMAIATRSTVDVPFTYWQRDVTIDGKVEETLMR-DGLYTGINSYNFNFDTVEE 81 +KKV+H + D T W+ D+T++G +E + G++ +F E Sbjct: 52 KKKVKH----LLELPKADTNLTLWKADLTVEGSFDEAIQGCQGVFHVATPMDF-----ES 102 Query: 80 KLPERIPLT*SIRFILIII 24 K PE + ++R +L II Sbjct: 103 KDPENEVIKPTVRGMLSII 121
>KDUI_CAUCR (Q9A873) 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC| 5.3.1.17) (5-keto-4-deoxyuronate isomerase) (DKI isomerase) Length = 279 Score = 27.7 bits (60), Expect = 7.6 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = -3 Query: 176 VTIDGKVEETLMRDGLYTGINSYNFNFDTVE 84 +T+DG E + RDGLY + + + F+ V+ Sbjct: 92 ITVDGVAYEIVPRDGLYVTMGAKDVTFEGVD 122
>PPK_XYLFT (Q87A63) Polyphosphate kinase (EC 2.7.4.1) (Polyphosphoric acid| kinase) (ATP-polyphosphate phosphotransferase) Length = 698 Score = 27.3 bits (59), Expect = 10.0 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = -3 Query: 158 VEETLMRDGLYTG--INSYNFNFDTVEEKLPERIPLT*SIRFILI 30 V + GLY ++ +FNF + + L E++PL +RF+ I Sbjct: 15 VSQQFRDPGLYLNRELSQLDFNFRVLAQALDEQVPLLERLRFLCI 59
>PPK_XYLFA (Q9PAC7) Polyphosphate kinase (EC 2.7.4.1) (Polyphosphoric acid| kinase) (ATP-polyphosphate phosphotransferase) Length = 698 Score = 27.3 bits (59), Expect = 10.0 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = -3 Query: 158 VEETLMRDGLYTG--INSYNFNFDTVEEKLPERIPLT*SIRFILI 30 V + GLY ++ +FNF + + L E++PL +RF+ I Sbjct: 15 VSQQFRDPGLYLNRELSQLDFNFRVLAQALDEQVPLLERLRFLCI 59 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,155,245 Number of Sequences: 219361 Number of extensions: 518431 Number of successful extensions: 1987 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1807 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1986 length of database: 80,573,946 effective HSP length: 79 effective length of database: 63,244,427 effective search space used: 1517866248 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)